Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO478G0717 Papaver somniferum HOM05D002561 ORTHO05D006466 3.2e-162 575.1 305 100.0
PSO782G0979 Papaver somniferum HOM05D002561 ORTHO05D006466 8.2e-142 507.3 300 84.0
PSO210G7210 Papaver somniferum HOM05D002561 ORTHO05D006466 2.6e-135 485.7 297 81.1
PSO832G1390 Papaver somniferum HOM05D002561 ORTHO05D006466 3.4e-127 458.8 297 77.8
TAR624G0407 Trochodendron aralioides HOM05D002561 ORTHO05D006466 1.7e-126 456.4 297 74.7
CSS0024007 Camellia sinensis var. sinensis HOM05D002561 ORTHO05D006466 3.7e-126 455.3 297 74.1
Ah.03g138410 Amaranthus hybridus HOM05D002561 ORTHO05D006466 4.8e-126 454.9 297 71.4
Cfa014656 Carpinus fangiana HOM05D002561 ORTHO05D006466 1.1e-125 453.8 297 74.1
Dinv00035 Davidia involucrata HOM05D002561 ORTHO05D006466 1.4e-125 453.4 297 72.7
Dinv10164 Davidia involucrata HOM05D002561 ORTHO05D006466 1.4e-125 453.4 297 72.7
Dinv07536 Davidia involucrata HOM05D002561 ORTHO05D006466 2.0e-124 449.5 297 72.4
Gohir.D02G177700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 1.0e-123 447.2 295 72.5
Gorai.005G199500 Gossypium raimondii HOM05D002561 ORTHO05D006466 1.0e-123 447.2 295 72.5
Eucgr.K01052 Eucalyptus grandis HOM05D002561 ORTHO05D006466 1.7e-123 446.4 297 71.7
Sc24g0000990 Simmondsia chinensis HOM05D002561 ORTHO05D006466 1.7e-123 446.4 297 72.1
COL.COLO4_28034 Corchorus olitorius HOM05D002561 ORTHO05D006466 2.9e-123 445.7 295 71.9
MSTRG.15131 Avicennia marina HOM05D002561 ORTHO05D006466 8.5e-123 444.1 297 71.4
Gohir.A03G154700 Gossypium hirsutum HOM05D002561 ORTHO05D006466 8.5e-123 444.1 295 72.2
Lsat_1_v5_gn_4_64440 Lactuca sativa HOM05D002561 ORTHO05D006466 8.5e-123 444.1 304 71.7
Sed0023046 Sechium edule HOM05D002561 ORTHO05D006466 8.5e-123 444.1 297 71.0
Cc05_g07670 Coffea canephora HOM05D002561 ORTHO05D006466 1.1e-122 443.7 297 70.7
ECA240G2497 Erigeron canadensis HOM05D002561 ORTHO05D006466 1.1e-122 443.7 297 72.4
Lj8C108T5 Lonicera japonica HOM05D002561 ORTHO05D006466 1.5e-122 443.4 297 71.7
Nn1g06426 Nelumbo nucifera HOM05D002561 ORTHO05D006466 1.5e-122 443.4 297 72.1
CsaV3_7G003080 Cucumis sativus L. HOM05D002561 ORTHO05D006466 5.5e-122 441.4 297 71.0
Thecc.02G185400 Theobroma cacao HOM05D002561 ORTHO05D006466 7.2e-122 441.0 297 70.7
Actinidia11101 Actinidia chinensis HOM05D002561 ORTHO05D006466 1.2e-121 440.3 297 71.0
MBI07_g29117_MAGBIO Magnolia biondii HOM05D002561 ORTHO05D006466 2.7e-121 439.1 297 71.0
Hund07915 Selenicereus undatus HOM05D002561 ORTHO05D006466 2.7e-121 439.1 288 70.5
CiPaw.03G181000 Carya illinoinensis HOM05D002561 ORTHO05D006466 3.6e-121 438.7 297 71.4
PGR142G4043 Punica granatum HOM05D002561 ORTHO05D006466 6.1e-121 438.0 295 69.8
MELO3C018869.2 Cucumis melo HOM05D002561 ORTHO05D006466 1.4e-120 436.8 297 70.4
Duzib052G0349 Durio zibethinus HOM05D002561 ORTHO05D006466 1.4e-120 436.8 297 69.7
Sabra07G0110300 Salix brachista HOM05D002292 ORTHO05D003256 1.4e-120 436.8 287 72.5
EL10Ac9g20811 Beta vulgaris HOM05D002561 ORTHO05D006466 1.8e-120 436.4 304 67.1
GSVIVG01020601001 Vitis vinifera HOM05D002561 ORTHO05D006466 1.8e-120 436.4 297 70.0
Potri.017G014700 Populus trichocarpa HOM05D002561 ORTHO05D006466 4.0e-120 435.3 295 70.8
Potri.007G137300 Populus trichocarpa HOM05D002561 ORTHO05D006466 1.5e-119 433.3 295 70.2
Migut.D00238 Erythranthe guttata HOM05D002561 ORTHO05D006466 2.6e-119 432.6 297 70.7
DCAR_013032 Daucus carota HOM05D002561 ORTHO05D006466 3.4e-119 432.2 281 73.3
Glyma.14G065100 Glycine max HOM05D002561 ORTHO05D006466 4.4e-119 431.8 295 70.8
Aqoxy4G00646 Aquilegia oxysepala HOM05D002561 ORTHO05D006466 7.5e-119 431.0 297 71.0
Cpa.g.sc83.89 Carica papaya HOM05D002561 ORTHO05D006466 9.8e-119 430.6 297 69.4
Glyma.02G251700 Glycine max HOM05D002561 ORTHO05D006466 9.8e-119 430.6 295 70.5
Atru.chr6.2875 Acer truncatum HOM05D002561 ORTHO05D006466 2.2e-118 429.5 297 70.4
Phvul.006G037700 Phaseolus vulgaris HOM05D002561 ORTHO05D006466 6.3e-118 427.9 295 69.5
Nitab4.5_0000621g0150 Nicotiana tabacum HOM05D002561 ORTHO05D006466 8.3e-118 427.6 297 68.7
Aa31LG2G21970 Aethionema arabicum HOM05D002561 ORTHO05D006466 1.1e-117 427.2 295 69.2
Ciclev10015209m.g Citrus clementina HOM05D002561 ORTHO05D006466 2.4e-117 426.0 297 69.0
Ca_13381_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 3.1e-117 425.6 295 69.2
Ca_30047_v3 Cicer arietinum L. HOM05D002561 ORTHO05D006466 3.1e-117 425.6 295 69.2
HanXRQChr05g0140561 Helianthus annuus HOM05D002561 ORTHO05D006466 5.4e-117 424.9 289 71.3
AUR62008772 Chenopodium quinoa HOM05D002561 ORTHO05D006466 9.2e-117 424.1 295 68.1
Medtr1g022960 Medicago truncatula HOM05D002561 ORTHO05D006466 9.2e-117 424.1 295 69.2
vmacro12361 Vaccinium macrocarpon HOM05D002561 ORTHO05D006466 9.2e-117 424.1 311 66.2
THA.LOC104804051 Tarenaya hassleriana HOM05D002561 ORTHO05D006466 1.2e-116 423.7 295 69.5
Sp7g26430 Schrenkiella parvula HOM05D002561 ORTHO05D006466 2.7e-116 422.5 295 68.1
AT4G28450 Arabidopsis thaliana HOM05D002561 ORTHO05D006466 5.9e-116 421.4 288 69.4
CARHR236220 Cardamine hirsuta HOM05D002561 ORTHO05D006466 5.9e-116 421.4 295 67.8
Sopen07g027630 Solanum pennellii HOM05D002561 ORTHO05D006466 1.0e-115 420.6 297 67.3
CANSAT64G1696 Cannabis sativa HOM05D002561 ORTHO05D006466 1.3e-115 420.2 288 69.4
AL7G24110 Arabidopsis lyrata HOM05D002561 ORTHO05D006466 2.3e-115 419.5 288 69.1
Carub.0007s1225 Capsella rubella HOM05D002561 ORTHO05D006466 2.3e-115 419.5 288 69.1
Solyc07g053660.3 Solanum lycopersicum HOM05D002561 ORTHO05D006466 2.9e-115 419.1 297 67.0
Nitab4.5_0004546g0040 Nicotiana tabacum HOM05D002561 ORTHO05D006466 5.0e-115 418.3 310 65.8
Zm00001eb064830 Zea mays HOM05D002561 ORTHO05D006466 5.0e-115 418.3 295 69.2
PGSC0003DMG401009395 Solanum tuberosum HOM05D002561 ORTHO05D006466 6.6e-115 417.9 297 67.0
arahy.Tifrunner.gnm1.ann1.TSZ6TX Arachis hypogaea HOM05D002561 ORTHO05D006466 1.1e-114 417.2 288 69.8
ATR0665G052 Amborella trichopoda HOM05D002561 ORTHO05D006466 4.3e-114 415.2 297 66.0
ClCG02G002370 Citrullus lanatus HOM05D002561 ORTHO05D006466 9.5e-114 414.1 297 69.0
Lalb_Chr25g0280621 Lupinus albus HOM05D002561 ORTHO05D006466 2.1e-113 412.9 295 67.1
RcHm_v2.0_Chr6g0267881 Rosa chinensis HOM05D002561 ORTHO05D006466 2.1e-113 412.9 288 67.4
TPR.G22970 Trifolium pratense HOM05D002561 ORTHO05D006466 3.6e-113 412.1 295 66.1
Sabra17G0011900 Salix brachista HOM05D002561 ORTHO05D006466 1.4e-112 410.2 328 62.5
TPR.G30494 Trifolium pratense HOM05D002561 ORTHO05D006466 1.4e-112 410.2 295 70.8
HPP92_000278 Vanilla planifolia HOM05D002561 ORTHO05D006466 1.4e-112 410.2 297 67.3
Lj3g0012051 Lotus japonicus HOM05D002561 ORTHO05D006466 2.3e-112 409.5 297 66.7
FAN15G2087 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.2e-111 407.1 288 66.7
FAN20G3107 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.5e-111 406.8 288 66.7
FAN27G0984 Fragaria x ananassa HOM05D002561 ORTHO05D006466 1.5e-111 406.8 288 66.7
Prupe.1G573700 Prunus persica HOM05D002561 ORTHO05D006466 2.0e-111 406.4 299 65.2
Prupe.6G177000 Prunus persica HOM05D002561 ORTHO05D006466 2.6e-111 406.0 284 67.3
CDE03G0236 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 4.4e-111 405.2 297 66.7
FvH4_2g10410 Fragaria vesca HOM05D002561 ORTHO05D006466 5.7e-111 404.8 288 66.3
Thhalv10025176m.g Eutrema salsugineum HOM05D002561 ORTHO05D006466 7.5e-111 404.4 295 64.1
Psat6g009760 Pisum sativum HOM05D002561 ORTHO05D006466 7.5e-111 404.4 309 65.4
A03p58100 Brassica napus HOM05D002561 ORTHO05D006466 2.0e-108 396.4 295 65.1
BraA03t14876Z Brassica rapa HOM05D002561 ORTHO05D006466 2.0e-108 396.4 295 65.1
BcaC06g32621 Brassica carinata HOM05D002561 ORTHO05D006466 2.7e-108 396.0 295 65.1
C07p56220 Brassica napus HOM05D002561 ORTHO05D006466 2.7e-108 396.0 295 65.1
BolC7t46099H Brassica oleracea HOM05D002561 ORTHO05D006466 2.7e-108 396.0 295 65.1
unitig_85.g27364 Utricularia gibba HOM05D002561 ORTHO05D006466 4.6e-108 395.2 297 66.7
MD08G1220200 Malus domestica HOM05D002561 ORTHO05D006466 1.7e-107 393.3 284 64.4
Mapoly0143s0027 Marchantia polymorpha HOM05D002561 ORTHO05D006466 1.7e-107 393.3 288 66.7
AagrBONN_evm.TU.Sc2ySwM_117.187 Anthoceros agrestis HOM05D002561 ORTHO05D006466 3.0e-107 392.5 296 63.5
SMO347G0106 Selaginella moellendorffii HOM05D002561 ORTHO05D006466 4.3e-106 388.7 288 69.4
QL08p040074 Quercus lobata HOM05D002561 ORTHO05D006466 6.2e-105 384.8 345 56.2
Rhsim06G0138000 Rhododendron simsii HOM05D002561 ORTHO05D006466 4.0e-104 382.1 339 59.0
CAN.G209.6 Capsicum annuum HOM05D002561 ORTHO05D006466 1.2e-103 380.6 297 63.3
TWI14G0319 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 7.5e-103 377.9 297 63.3
SGA_v2.0_scaffold70G23496 Striga asiatica HOM05D002561 ORTHO05D006466 4.9e-102 375.2 310 61.6
TWI59G1106 Tripterygium wilfordii HOM05D002561 ORTHO05D006466 3.2e-101 372.5 297 62.6
MD15G1410700 Malus domestica HOM05D002561 ORTHO05D006466 7.0e-101 371.3 283 62.2
Manes.13G142500 Manihot esculenta HOM05D002561 ORTHO05D006466 4.6e-100 368.6 297 62.3
arahy.Tifrunner.gnm1.ann1.UE4GYS Arachis hypogaea HOM05D002561 ORTHO05D006466 7.8e-100 367.9 288 62.8
Peaxi162Scf00845g00022 Petunia axillaris HOM05D002561 ORTHO05D006466 2.3e-99 366.3 293 61.8
Actinidia11004 Actinidia chinensis HOM05D002561 ORTHO05D006466 5.0e-99 365.2 229 74.2
AUR62025466 Chenopodium quinoa HOM05D002561 ORTHO05D006466 2.5e-98 362.8 204 79.9
Sc04g0004740 Simmondsia chinensis HOM05D002561 ORTHO05D006466 2.8e-89 332.8 232 69.0
TAR626G1404 Trochodendron aralioides HOM05D002561 ORTHO05D006466 3.1e-88 329.3 297 59.3
MCO01G363 Micromonas commoda HOM05D002561 ORTHO05D006466 2.2e-86 323.2 293 52.6
PRCOL_00005495 Prasinoderma coloniale HOM05D002561 ORTHO05D006466 1.3e-83 313.9 288 51.7
Sc21g0003230 Simmondsia chinensis HOM05D002561 ORTHO05D006466 7.6e-79 298.1 232 67.2
Cre07.g318702 Chlamydomonas reinhardtii HOM05D002561 ORTHO05D006466 9.9e-79 297.7 288 51.0
MBI07_g29113_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D003010 9.9e-71 271.2 229 61.1
CBR_g34460 Chara braunii HOM05D002561 ORTHO05D006466 1.7e-70 270.4 220 60.5
Sc04g0004800 Simmondsia chinensis HOM05D002561 ORTHO05D006466 3.5e-68 262.7 170 71.8
FAN07G0711 Fragaria x ananassa HOM05D002561 ORTHO05D006466 6.0e-68 261.9 151 78.1
Hma1.2p1_0002F.1_g002200 Hydrangea macrophylla HOM05D002561 ORTHO05D006466 4.3e-66 255.8 288 47.2
Pp3c9_6000 Physcomitrium patens HOM05D002561 ORTHO05D006466 6.7e-59 231.9 147 70.1
Sc04g0004780 Simmondsia chinensis HOM05D002561 ORTHO05D006466 3.0e-51 206.5 190 56.8
CDE04G0034 Ceratophyllum demersum HOM05D002561 ORTHO05D006466 1.1e-42 177.9 109 73.4
Os01g0238900 Oryza sativa ssp. japonica HOM05D002561 ORTHO05D006466 3.7e-41 172.9 113 69.0
COL.COLO4_18046 Corchorus olitorius HOM05D002561 ORTHO05D006466 1.2e-36 157.9 199 47.7
FvH4_4g06150 Fragaria vesca HOM05D002561 ORTHO05D006466 7.4e-26 122.1 120 50.0
Haze_13235 Corylus avellana HOM05D002561 ORTHO05D006466 5.0e-22 109.4 67 74.6
Haze_13238 Corylus avellana HOM05D002561 ORTHO05D006466 5.0e-22 109.4 67 74.6
Sc04g0004770 Simmondsia chinensis HOM05D002561 ORTHO05D006466 5.0e-14 82.8 51 74.5
FAN27G3439 Fragaria x ananassa HOM05D002561 ORTHO05D014694 3.0e-11 73.6 73 47.9
Prupe.3G166600 Prunus persica HOM05D002561 ORTHO05D006466 2.8e-09 67.0 96 40.6
Os11g0660300 Oryza sativa ssp. japonica HOM05D005151 ORTHO05D006322 6.3e-09 65.9 207 26.6
arahy.Tifrunner.gnm1.ann1.LZQ0FA Arachis hypogaea HOM05D002561 ORTHO05D006466 1.4e-08 64.7 35 74.3
Zm00001eb165440 Zea mays HOM05D005151 ORTHO05D006322 5.4e-08 62.8 207 28.0
VMungo1080G0335 Vigna mungo HOM05D002561 ORTHO05D017730 7.0e-08 62.4 36 72.2
VMungo1215G0093 Vigna mungo HOM05D000467 ORTHO05D017730 7.0e-08 62.4 36 72.2
Sc21g0001130 Simmondsia chinensis HOM05D000684 ORTHO05D000688 9.1e-08 62.0 181 21.5
VMungo1080G0258 Vigna mungo HOM05D000467 ORTHO05D017730 9.1e-08 62.0 96 38.5
VMungo0251G0719 Vigna mungo HOM05D000467 ORTHO05D017730 1.2e-07 61.6 36 72.2
Lalb_Chr08g0246621 Lupinus albus HOM05D003825 ORTHO05D004491 7.7e-07 58.9 175 22.9
Haze_06889 Corylus avellana HOM05D000684 ORTHO05D000688 6.5e-06 55.8 197 21.8
CBR_g34660 Chara braunii HOM05D000019 ORTHO05D001702 8.6e-06 55.5 193 25.9
ECA236G2533 Erigeron canadensis HOM05D003825 ORTHO05D004491 8.6e-06 55.5 162 24.7
HPP92_018271 Vanilla planifolia HOM05D000049 ORTHO05D000027 8.6e-06 55.5 155 28.4


User provided reference genes

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