Gene: PGSC0003DMG401009395

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG401009395
  • Transcript Identifier PGSC0003DMT400024304
  • Gene Type Coding gene
  • Location ST4.03ch07 : 49655853-49662447 : negative

Gene Family Information

  • ID HOM05D002561
  • #Genes/#Species 266/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37432040
  • id PGSC0003DMG401009395.v4.03
  • uniprot M1AJV3

Descriptions

  • Description U3 small nucleolar RNA (U3 snorna) associated protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
GOA Databaseprotein ubiquitination
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0080008
IBA
IEA
GOA DatabaseCul4-RING E3 ubiquitin ligase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007287 Sof1-like protein
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR013979 Translation initiation factor, beta propellor-like domain
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
17.1.3.2.1.7 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.assembly factor (Sof1)