Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO386G0247 Papaver somniferum HOM05D001849 ORTHO05D004075 0.0e+00 2296.2 1269 100.0
PSO724G0283 Papaver somniferum HOM05D001849 ORTHO05D004075 0.0e+00 1823.1 1153 89.3
PSO724G0042 Papaver somniferum HOM05D001849 ORTHO05D004075 6.1e-311 1071.2 1453 52.5
PSO386G0057 Papaver somniferum HOM05D001849 ORTHO05D004075 2.8e-308 1062.4 1468 51.9
Aqoxy7G04079 Aquilegia oxysepala HOM05D001849 ORTHO05D004075 3.3e-245 852.8 1365 47.0
CiPaw.01G215800 Carya illinoinensis HOM05D001849 ORTHO05D004075 1.5e-208 731.1 1410 40.8
Nn8g38564 Nelumbo nucifera HOM05D001849 ORTHO05D004075 1.2e-207 728.0 1408 44.0
TWI14G1157 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 2.7e-202 710.3 1373 40.6
CSS0013236 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 3.5e-202 709.9 1372 42.0
CSS0036669 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 7.7e-202 708.8 1372 42.1
Potri.001G165800 Populus trichocarpa HOM05D001849 ORTHO05D004075 8.6e-201 705.3 1377 42.8
RcHm_v2.0_Chr2g0146441 Rosa chinensis HOM05D001849 ORTHO05D004075 1.0e-198 698.4 1386 41.6
Thecc.06G125000 Theobroma cacao HOM05D001849 ORTHO05D004075 8.9e-198 695.3 1408 42.1
Dinv37967 Davidia involucrata HOM05D001849 ORTHO05D004075 1.3e-196 691.4 1335 41.8
Sopen06g022460 Solanum pennellii HOM05D001849 ORTHO05D004075 4.9e-196 689.5 1373 42.5
CiPaw.02G133700 Carya illinoinensis HOM05D001849 ORTHO05D004075 2.0e-194 684.1 1397 40.9
Duzib192G0748 Durio zibethinus HOM05D001849 ORTHO05D004075 1.0e-193 681.8 1405 41.5
TWI59G0043 Tripterygium wilfordii HOM05D001849 ORTHO05D004075 1.7e-193 681.0 1374 40.3
VMungo0331G0811 Vigna mungo HOM05D001849 ORTHO05D004075 3.9e-193 679.9 1346 40.7
COL.COLO4_30798 Corchorus olitorius HOM05D001849 ORTHO05D004075 3.3e-192 676.8 1397 42.6
Rhsim08G0241300 Rhododendron simsii HOM05D001849 ORTHO05D004689 3.3e-192 676.8 1431 41.1
Cfa003510 Carpinus fangiana HOM05D001849 ORTHO05D004075 3.6e-191 673.3 1353 40.1
Sabra01G0127500 Salix brachista HOM05D001849 ORTHO05D004075 3.6e-191 673.3 1372 41.9
MD09G1178000 Malus domestica HOM05D001849 ORTHO05D004075 3.1e-190 670.2 1393 40.6
MD17G1148700 Malus domestica HOM05D001849 ORTHO05D004075 2.4e-187 660.6 1394 39.1
Manes.04G148200 Manihot esculenta HOM05D001849 ORTHO05D004075 2.4e-187 660.6 1370 41.9
Gorai.010G174200 Gossypium raimondii HOM05D001849 ORTHO05D004075 3.2e-187 660.2 1371 40.2
Gohir.D06G149500 Gossypium hirsutum HOM05D001849 ORTHO05D004075 7.0e-187 659.1 1377 40.0
Phvul.010G125600 Phaseolus vulgaris HOM05D001849 ORTHO05D004075 2.7e-186 657.1 1350 40.1
QL05p003642 Quercus lobata HOM05D001849 ORTHO05D004075 2.7e-186 657.1 1465 39.2
Lj3g0013610 Lotus japonicus HOM05D001849 ORTHO05D004075 3.9e-185 653.3 1362 39.8
Lalb_Chr04g0253751 Lupinus albus HOM05D001849 ORTHO05D004075 8.6e-185 652.1 1352 39.6
CAN.G1743.7 Capsicum annuum HOM05D001849 ORTHO05D004075 2.5e-184 650.6 1353 40.9
Ca_23413_v3 Cicer arietinum L. HOM05D001849 ORTHO05D004075 2.5e-184 650.6 1347 40.2
Glyma.16G010400 Glycine max HOM05D001849 ORTHO05D004075 2.5e-184 650.6 1363 39.8
FvH4_6g35180 Fragaria vesca HOM05D001849 ORTHO05D004075 2.1e-183 647.5 1372 41.6
Medtr8g021980 Medicago truncatula HOM05D001849 ORTHO05D004075 2.8e-183 647.1 1346 40.2
arahy.Tifrunner.gnm1.ann1.NEIN3W Arachis hypogaea HOM05D001849 ORTHO05D004075 6.2e-183 646.0 1374 40.1
arahy.Tifrunner.gnm1.ann1.M8Z2DU Arachis hypogaea HOM05D001849 ORTHO05D004075 8.0e-183 645.6 1379 40.0
Glyma.07G042100 Glycine max HOM05D001849 ORTHO05D004075 1.1e-182 645.2 1375 40.7
DCAR_026425 Daucus carota HOM05D001849 ORTHO05D004075 2.3e-182 644.0 1357 40.4
Lalb_Chr10g0101311 Lupinus albus HOM05D001849 ORTHO05D004075 5.2e-182 642.9 1370 40.0
Prupe.3G037300 Prunus persica HOM05D001849 ORTHO05D004075 1.5e-181 641.3 1411 39.1
SalBow6G5403 Salvia bowleyana HOM05D001849 ORTHO05D004075 1.5e-181 641.3 1356 41.9
GSVIVG01016716001 Vitis vinifera HOM05D001849 ORTHO05D004075 5.8e-181 639.4 1022 42.2
FAN14G5889 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.3e-180 638.3 1393 40.6
Ciclev10024725m.g Citrus clementina HOM05D001849 ORTHO05D004075 8.3e-180 635.6 1307 40.3
FAN02G1816 Fragaria x ananassa HOM05D001849 ORTHO05D004075 1.9e-179 634.4 1389 40.8
Psat4g166800 Pisum sativum HOM05D001849 ORTHO05D004075 1.6e-178 631.3 1343 39.2
Hma1.2p1_0229F.1_g096780 Hydrangea macrophylla HOM05D001849 ORTHO05D004075 1.9e-176 624.4 1375 39.6
FAN05G2069 Fragaria x ananassa HOM05D001849 ORTHO05D004075 3.6e-175 620.2 1416 40.1
Gohir.A05G138700 Gossypium hirsutum HOM05D001849 ORTHO05D004075 3.6e-175 620.2 1377 41.1
Sed0014139 Sechium edule HOM05D001849 ORTHO05D004075 1.8e-174 617.8 1377 38.3
Duzib235G1365 Durio zibethinus HOM05D001849 ORTHO05D004075 4.4e-173 613.2 1382 39.2
FAN09G3103 Fragaria x ananassa HOM05D001849 ORTHO05D004075 2.9e-172 610.5 1433 39.1
Lalb_Chr17g0343441 Lupinus albus HOM05D001849 ORTHO05D004075 3.7e-172 610.1 1351 38.6
Nitab4.5_0002716g0060 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.2e-170 605.1 1210 39.3
SalBow6G6581 Salvia bowleyana HOM05D001849 ORTHO05D004075 2.7e-170 604.0 1110 42.1
TAR626G0481 Trochodendron aralioides HOM05D001849 ORTHO05D004075 2.8e-167 594.0 1079 45.8
CsaV3_7G034240 Cucumis sativus L. HOM05D001849 ORTHO05D004075 5.2e-166 589.7 1379 37.6
Gohir.D05G140900 Gossypium hirsutum HOM05D001849 ORTHO05D004075 1.5e-165 588.2 1372 39.2
Hund18671 Selenicereus undatus HOM05D001849 ORTHO05D004075 3.4e-165 587.0 1373 36.6
PGR102G3102 Punica granatum HOM05D001849 ORTHO05D004075 1.3e-164 585.1 1392 38.4
Gorai.009G145100 Gossypium raimondii HOM05D001849 ORTHO05D004075 1.7e-164 584.7 1393 39.1
CANSAT56G4149 Cannabis sativa HOM05D001849 ORTHO05D004075 1.1e-163 582.0 1368 39.8
Sabra03G0040600 Salix brachista HOM05D001849 ORTHO05D004075 5.4e-163 579.7 1489 38.1
Nitab4.5_0003137g0070 Nicotiana tabacum HOM05D001849 ORTHO05D004075 3.0e-161 573.9 1022 40.1
Cc04_g01030 Coffea canephora HOM05D001849 ORTHO05D004075 1.3e-159 568.5 1151 39.4
MELO3C024333.2 Cucumis melo HOM05D001849 ORTHO05D004075 4.8e-159 566.6 1403 36.9
MSTRG.22534 Avicennia marina HOM05D001849 ORTHO05D004075 1.4e-158 565.1 1353 38.3
TPR.G29998 Trifolium pratense HOM05D001849 ORTHO05D004075 1.8e-158 564.7 1347 38.2
Dinv37845 Davidia involucrata HOM05D001849 ORTHO05D004075 2.4e-158 564.3 1201 42.0
Peaxi162Scf00207g01546 Petunia axillaris HOM05D001849 ORTHO05D004075 9.9e-157 558.9 898 42.0
Gohir.A06G143000 Gossypium hirsutum HOM05D001849 ORTHO05D004075 2.9e-156 557.4 1367 38.7
Solyc06g063010.4 Solanum lycopersicum HOM05D001849 ORTHO05D004075 1.1e-155 555.4 940 41.3
EL10Ac7g16445 Beta vulgaris HOM05D001849 ORTHO05D004075 4.2e-155 553.5 1344 37.7
MBI19_g29883_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 4.2e-155 553.5 907 41.2
AT1G72390 Arabidopsis thaliana HOM05D001849 ORTHO05D004075 1.2e-154 552.0 1391 37.3
Potri.003G069200 Populus trichocarpa HOM05D001849 ORTHO05D004075 2.7e-154 550.8 1321 39.0
AL2G32060 Arabidopsis lyrata HOM05D001849 ORTHO05D004075 1.1e-152 545.4 1372 37.0
Carub.0002s1924 Capsella rubella HOM05D001849 ORTHO05D004075 1.5e-152 545.0 1210 36.0
CARHR065290 Cardamine hirsuta HOM05D001849 ORTHO05D004075 1.5e-152 545.0 1214 35.9
Sc15g0000590 Simmondsia chinensis HOM05D001849 ORTHO05D004075 2.5e-152 544.3 1364 35.8
THA.LOC104812264 Tarenaya hassleriana HOM05D001849 ORTHO05D004075 5.8e-149 533.1 1220 37.0
Lj9C535T9 Lonicera japonica HOM05D001849 ORTHO05D004075 7.1e-147 526.2 1426 39.1
Aa31LG4G2730 Aethionema arabicum HOM05D001849 ORTHO05D004075 9.3e-147 525.8 1397 36.9
A07p38580 Brassica napus HOM05D001849 ORTHO05D004075 9.3e-147 525.8 1397 36.3
BraA07t31416Z Brassica rapa HOM05D001849 ORTHO05D004075 9.3e-147 525.8 1410 36.0
BraA02t06845Z Brassica rapa HOM05D001849 ORTHO05D004075 6.0e-146 523.1 1379 36.0
BcaC03g15374 Brassica carinata HOM05D001849 ORTHO05D004075 7.9e-146 522.7 1372 35.9
C02p29880 Brassica napus HOM05D001849 ORTHO05D004075 7.9e-146 522.7 1372 35.9
Migut.I01106 Erythranthe guttata HOM05D001849 ORTHO05D004075 1.0e-145 522.3 1221 36.3
A02p17980 Brassica napus HOM05D001849 ORTHO05D004075 2.3e-145 521.2 1373 35.9
Thhalv10018006m.g Eutrema salsugineum HOM05D001849 ORTHO05D004075 8.7e-145 519.2 1422 34.7
BolC2t09038H Brassica oleracea HOM05D001849 ORTHO05D004075 1.1e-144 518.8 1374 35.8
Cpa.g.sc25.150 Carica papaya HOM05D001849 ORTHO05D004075 2.5e-144 517.7 1151 41.1
ClCG09G001150 Citrullus lanatus HOM05D001849 ORTHO05D004075 5.6e-144 516.5 1007 37.5
BcaB05g24751 Brassica carinata HOM05D001849 ORTHO05D004075 2.8e-143 514.2 1188 36.3
C06p46750 Brassica napus HOM05D001849 ORTHO05D004075 3.7e-143 513.8 1415 35.4
BolC6t39719H Brassica oleracea HOM05D001849 ORTHO05D004075 8.1e-143 512.7 1417 35.4
Atru.chr1.4088 Acer truncatum HOM05D001849 ORTHO05D004075 2.5e-139 501.1 780 42.9
Sp5g27470 Schrenkiella parvula HOM05D001849 ORTHO05D004075 2.3e-137 494.6 1383 33.6
ECA234G1749 Erigeron canadensis HOM05D001849 ORTHO05D004075 1.4e-134 485.3 1348 38.6
AUR62009923 Chenopodium quinoa HOM05D001849 ORTHO05D004075 3.1e-134 484.2 1330 33.7
Ah.15g095140 Amaranthus hybridus HOM05D001849 ORTHO05D004075 2.0e-133 481.5 1348 36.1
Oeu011098.1 Olea europaea HOM05D001849 ORTHO05D004075 1.7e-132 478.4 942 38.4
HPP92_011068 Vanilla planifolia HOM05D001849 ORTHO05D004075 5.0e-132 476.9 1367 37.1
Oeu000390.1 Olea europaea HOM05D001849 ORTHO05D004075 6.5e-132 476.5 1238 34.0
unitig_747.g21722 Utricularia gibba HOM05D001849 ORTHO05D004075 5.1e-129 466.8 1359 33.9
HanXRQChr10g0311861 Helianthus annuus HOM05D001849 ORTHO05D004075 2.2e-127 461.5 1322 36.5
HanXRQChr12g0360181 Helianthus annuus HOM05D001849 ORTHO05D004075 9.4e-123 446.0 1333 34.8
Manes.11G016300 Manihot esculenta HOM05D001849 ORTHO05D004075 1.0e-121 442.6 1065 35.4
Medtr5g009590 Medicago truncatula HOM05D001849 ORTHO05D004075 2.7e-114 417.9 998 35.0
CDE06G0789 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 1.8e-110 405.2 1258 32.9
AUR62001442 Chenopodium quinoa HOM05D001849 ORTHO05D004075 7.7e-109 399.8 1312 31.1
Nitab4.5_0012739g0010 Nicotiana tabacum HOM05D001849 ORTHO05D004075 1.3e-108 399.1 1094 34.6
SGA_v2.0_scaffold71G23886 Striga asiatica HOM05D001849 ORTHO05D004075 3.2e-107 394.4 1368 33.6
Actinidia32208 Actinidia chinensis HOM05D001849 ORTHO05D004075 4.7e-106 390.6 1011 39.0
Nitab4.5_0004322g0020 Nicotiana tabacum HOM05D001849 ORTHO05D004075 4.7e-106 390.6 801 37.8
ATR0681G273 Amborella trichopoda HOM05D001849 ORTHO05D004075 2.2e-100 371.7 1014 33.7
Zm00001eb203360 Zea mays HOM05D001849 ORTHO05D004075 2.2e-100 371.7 1207 30.8
Haze_16065 Corylus avellana HOM05D001849 ORTHO05D004075 1.9e-99 368.6 535 43.9
TAR622G0522 Trochodendron aralioides HOM05D001849 ORTHO05D004075 9.1e-94 349.7 1350 29.9
Nn3g17987 Nelumbo nucifera HOM05D001849 ORTHO05D004075 9.8e-88 329.7 1376 29.9
BcaB03g14988 Brassica carinata HOM05D001849 ORTHO05D004075 5.2e-81 307.4 1201 29.1
ECA247G2654 Erigeron canadensis HOM05D001849 ORTHO05D004075 6.6e-68 263.8 1182 28.9
Actinidia32207 Actinidia chinensis HOM05D001849 ORTHO05D004075 8.1e-66 256.9 314 48.7
CDE07G1198 Ceratophyllum demersum HOM05D001849 ORTHO05D004075 2.3e-65 255.4 1217 28.8
SEGI_32525 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 4.1e-62 244.6 1131 28.1
Dinv16157 Davidia involucrata HOM05D001849 ORTHO05D004075 9.2e-62 243.4 961 29.4
MBI16_g25623_MAGBIO Magnolia biondii HOM05D001849 ORTHO05D004075 1.6e-61 242.7 1392 28.0
Psat5g189840 Pisum sativum HOM05D001849 ORTHO05D004075 1.6e-61 242.7 396 38.4
SEGI_18725 Sequoiadendron giganteum HOM05D001849 ORTHO05D004075 1.6e-58 232.6 1017 29.0
QL05p003384 Quercus lobata HOM05D001849 ORTHO05D004075 3.1e-57 228.4 893 35.5
QL01p003145 Quercus lobata HOM05D001849 ORTHO05D004075 6.8e-57 227.3 1021 27.1
Actinidia14933 Actinidia chinensis HOM05D001849 ORTHO05D004075 7.1e-54 217.2 975 27.9
Prupe.1G319400 Prunus persica HOM05D001849 ORTHO05D004075 2.7e-53 215.3 897 27.2
Psat5g189920 Pisum sativum HOM05D004963 ORTHO05D006638 1.4e-49 203.0 319 39.8
Cfa015821 Carpinus fangiana HOM05D001849 ORTHO05D004075 3.8e-47 194.9 313 41.2
Rhsim09G0102300 Rhododendron simsii HOM05D001849 ORTHO05D004075 3.8e-47 194.9 1019 26.9
CANSAT01G2891 Cannabis sativa HOM05D001849 ORTHO05D004075 5.4e-46 191.0 875 27.4
Dinv04913 Davidia involucrata HOM05D001849 ORTHO05D004075 2.7e-45 188.7 868 27.2
Lsat_1_v5_gn_1_37801 Lactuca sativa HOM05D001849 ORTHO05D004075 6.0e-45 187.6 804 26.9
Atru.chr11.324 Acer truncatum HOM05D001849 ORTHO05D004075 9.6e-43 180.3 350 36.6
Medtr8g106435 Medicago truncatula HOM05D001849 ORTHO05D004075 1.3e-42 179.9 498 29.7
Haze_00674 Corylus avellana HOM05D001849 ORTHO05D004075 9.0e-41 173.7 490 31.6
vmacro15055 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 1.5e-40 172.9 197 51.8
CSS0014980 Camellia sinensis var. sinensis HOM05D001849 ORTHO05D004075 3.8e-39 168.3 688 26.5
TAR626G0936 Trochodendron aralioides HOM05D001849 ORTHO05D004075 4.9e-39 167.9 208 48.1
HanXRQChr04g0094421 Helianthus annuus HOM05D001849 ORTHO05D004075 1.6e-37 162.9 171 49.7
CiPaw.05G244500 Carya illinoinensis HOM05D001849 ORTHO05D004075 5.1e-36 157.9 739 26.9
Mapoly0055s0059 Marchantia polymorpha HOM05D001849 ORTHO05D004075 1.3e-34 153.3 946 24.0
Lj6A751T55 Lonicera japonica HOM05D001849 ORTHO05D004075 1.6e-34 152.9 162 53.7
Pp3c13_8340 Physcomitrium patens HOM05D001849 ORTHO05D004075 2.0e-32 146.0 1003 21.6
Haze_16071 Corylus avellana HOM05D001849 ORTHO05D004075 3.4e-32 145.2 362 34.5
Manes.14G108850 Manihot esculenta HOM05D001849 ORTHO05D004075 2.4e-30 139.0 873 24.2
Pp3c3_3510 Physcomitrium patens HOM05D001849 ORTHO05D004075 1.5e-27 129.8 925 22.8
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 7.4e-27 127.5 219 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4287 Anthoceros agrestis HOM05D001849 ORTHO05D004075 2.1e-26 125.9 937 24.9
CBR_g31688 Chara braunii HOM05D001849 ORTHO05D004075 3.0e-20 105.5 163 35.0
SHI29649 Sapria himalayana HOM05D001849 ORTHO05D004075 5.3e-17 94.7 369 29.8
vmacro10614 Vaccinium macrocarpon HOM05D001849 ORTHO05D004075 9.0e-17 94.0 88 56.8
SHI29650 Sapria himalayana HOM05D001849 ORTHO05D004075 7.6e-16 90.9 125 39.2
SHI29648 Sapria himalayana HOM05D001849 ORTHO05D004075 3.8e-15 88.6 81 53.1
BcaC03g15372 Brassica carinata HOM05D001849 ORTHO05D004075 1.2e-13 83.6 538 27.1
Medtr8g106415 Medicago truncatula HOM05D001849 ORTHO05D004075 1.3e-12 80.1 90 46.7
BcaB03g14986 Brassica carinata HOM05D001849 ORTHO05D004075 5.1e-12 78.2 136 36.0
SHI29651 Sapria himalayana HOM05D001849 ORTHO05D004075 8.7e-12 77.4 597 33.5
Manes.06G063600 Manihot esculenta HOM05D001849 ORTHO05D004075 4.8e-10 71.6 70 55.7
Nitab4.5_0006425g0080 Nicotiana tabacum HOM05D001849 ORTHO05D004075 6.9e-09 67.8 336 32.4
MCO11G122 Micromonas commoda HOM05D001849 ORTHO05D004075 1.5e-08 66.6 95 40.0
Oeu013447.1 Olea europaea HOM05D001849 ORTHO05D004075 1.5e-08 66.6 178 36.5
Atru.chr11.323 Acer truncatum HOM05D001849 ORTHO05D004075 4.5e-08 65.1 485 25.6
Cpa.g.sc25.149 Carica papaya HOM05D020865 ORTHO05D004075 2.2e-07 62.8 122 36.9


User provided reference genes

Program Settings