Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 0.0e+00 1466.1 747 100.0
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 0.0e+00 1372.8 744 94.6
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 4.5e-282 974.5 737 67.6
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 7.1e-280 967.2 766 65.9
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 1.6e-279 966.1 737 69.2
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 9.0e-275 950.3 744 65.1
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 1.4e-267 926.4 742 64.8
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 6.9e-267 924.1 744 64.2
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 2.0e-266 922.5 739 63.5
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 2.0e-266 922.5 765 63.3
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 3.4e-266 921.8 744 64.1
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 4.5e-266 921.4 745 64.3
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 8.4e-265 917.1 763 63.4
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 8.4e-265 917.1 737 64.3
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 7.1e-264 914.1 718 66.0
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 2.7e-263 912.1 739 64.8
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.3e-262 909.8 739 63.7
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 3.0e-262 908.7 739 64.0
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 3.3e-261 905.2 745 63.1
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 7.4e-261 904.0 729 64.7
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 2.8e-260 902.1 766 62.8
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 4.8e-260 901.4 760 62.8
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 3.1e-259 898.7 739 62.7
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 1.2e-258 896.7 762 61.7
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 1.0e-257 893.6 716 64.9
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 2.5e-256 889.0 713 64.5
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 2.5e-256 889.0 740 62.8
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 3.2e-256 888.6 823 58.2
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.2e-256 888.6 747 63.1
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 4.2e-256 888.3 715 64.6
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 7.2e-256 887.5 715 64.8
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 2.1e-255 885.9 727 62.6
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 2.1e-255 885.9 731 62.4
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 4.6e-255 884.8 715 64.5
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 6.1e-255 884.4 770 61.7
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.3e-254 882.5 749 62.6
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 3.0e-254 882.1 744 62.6
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 6.7e-254 880.9 745 62.1
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.1e-253 880.2 776 61.3
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 1.1e-253 880.2 716 63.7
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 1.9e-253 879.4 769 60.9
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 3.3e-253 878.6 742 62.5
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 3.3e-253 878.6 718 63.5
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 5.7e-253 877.9 738 61.4
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 5.7e-253 877.9 738 61.4
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 9.7e-253 877.1 740 62.4
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.3e-252 876.7 745 62.1
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 1.7e-252 876.3 716 63.5
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 2.2e-252 875.9 743 61.8
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 2.8e-252 875.5 730 61.8
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 2.8e-252 875.5 728 61.7
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 3.7e-252 875.2 735 60.5
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 8.2e-252 874.0 769 60.6
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 8.2e-252 874.0 721 61.0
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 4.1e-251 871.7 727 62.0
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 9.1e-251 870.5 717 63.2
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 1.5e-250 869.8 760 61.2
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 7.7e-250 867.5 715 63.4
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 7.7e-250 867.5 801 58.4
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 7.7e-250 867.5 713 62.7
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 1.4e-248 863.2 772 59.6
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 1.9e-248 862.8 726 61.7
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 3.2e-248 862.1 744 60.2
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 4.2e-248 861.7 764 59.7
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 2.0e-242 842.8 712 61.4
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 1.0e-241 840.5 724 60.9
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 1.1e-237 827.0 715 60.4
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 3.3e-237 825.5 713 60.4
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 7.4e-237 824.3 710 60.7
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 2.2e-236 822.8 713 59.5
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 6.3e-236 821.2 713 59.6
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 1.1e-235 820.5 713 60.2
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 1.4e-235 820.1 713 59.9
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 1.0e-233 813.9 714 59.5
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 1.7e-233 813.1 713 59.5
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 3.2e-232 808.9 707 59.3
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 9.4e-232 807.4 737 58.1
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 1.8e-230 803.1 757 56.9
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 4.0e-230 802.0 1001 47.7
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 6.3e-228 794.7 711 58.4
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 7.7e-226 787.7 748 56.3
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 2.9e-225 785.8 741 56.7
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 2.1e-223 779.6 691 59.5
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 1.0e-222 777.3 860 50.8
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 3.0e-222 775.8 704 58.4
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 2.8e-220 769.2 739 56.4
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 6.3e-220 768.1 736 56.2
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 2.7e-218 762.7 957 46.8
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 1.3e-217 760.4 750 53.9
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 4.7e-215 751.9 735 57.0
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 7.8e-210 734.6 633 60.7
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 2.3e-209 733.0 643 60.0
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 2.8e-207 726.1 718 54.0
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 3.6e-207 725.7 747 53.0
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 4.7e-199 698.7 604 59.9
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 5.4e-179 632.1 598 57.9
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 9.0e-174 614.8 702 48.0
Hma1.2p1_0501F.1_g167660 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 7.6e-173 611.7 493 64.7
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 1.7e-172 610.5 550 60.0
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.3e-169 600.9 617 56.4
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 4.2e-163 579.3 772 44.7
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 8.1e-159 565.1 782 42.7
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 3.5e-154 549.7 726 44.1
Os03g0293400 Oryza sativa ssp. japonica HOM05D005074 ORTHO05D006853 6.9e-134 482.3 390 62.1
arahy.Tifrunner.gnm1.ann1.W8IS2K Arachis hypogaea HOM05D005074 ORTHO05D006853 7.0e-126 455.7 387 60.2
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.1e-114 417.5 663 41.3
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.2e-101 375.2 512 44.1
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 7.7e-101 372.5 475 45.7
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 8.9e-97 359.0 460 44.3
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 6.3e-95 352.8 714 35.7
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.8e-89 332.8 327 57.5
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 2.9e-87 327.4 313 57.5
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.3e-83 313.9 294 59.5
FAN09G0802 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.8e-73 281.6 263 58.2
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 5.8e-72 276.6 1014 25.6
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 1.1e-67 262.3 171 72.5
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 1.4e-62 245.4 281 51.6
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 1.1e-59 235.7 160 69.4
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 2.1e-58 231.5 231 55.4
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 2.4e-54 218.0 703 27.5
Duzib093G1335 Durio zibethinus HOM05D005074 ORTHO05D006853 4.6e-53 213.8 371 38.0
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 3.0e-52 211.1 278 42.1
BcaC06g31962 Brassica carinata HOM05D005074 ORTHO05D006853 2.1e-50 204.9 162 58.0
AagrBONN_evm.TU.Sc2ySwM_344.4419 Anthoceros agrestis HOM05D005074 ORTHO05D006853 4.2e-46 190.7 158 55.7
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 9.6e-43 179.5 124 66.1
Glyma.U000501 Glycine max HOM05D005074 ORTHO05D006853 6.9e-33 146.7 172 48.8
Ca_06765_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 4.1e-25 120.9 193 40.4
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 4.1e-25 120.9 281 33.5
Aa31LG1G22970 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.0e-23 114.0 120 51.7
Medtr1g024155 Medicago truncatula HOM05D005074 ORTHO05D006853 1.0e-20 106.3 119 51.3
MCO14G225 Micromonas commoda HOM05D005074 ORTHO05D006853 3.0e-20 104.8 215 32.6
Aa31sc1955G20 Aethionema arabicum HOM05D005074 ORTHO05D006853 2.5e-19 101.7 105 49.5
Medtr8g092520 Medicago truncatula HOM05D005074 ORTHO05D006853 2.5e-14 85.1 67 67.2
Cre05.g239450 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 2.0e-11 75.5 163 33.7
Pp3c2_27000 Physcomitrium patens HOM05D005074 ORTHO05D034455 4.4e-11 74.3 163 27.6
Cre02.g079150 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 1.8e-09 68.9 160 29.4
PSO675G8941 Papaver somniferum HOM05D005074 ORTHO05D006853 1.8e-09 68.9 104 32.7
Aa31LG1G19700 Aethionema arabicum HOM05D005074 ORTHO05D023363 2.0e-08 65.5 54 55.6
Cfa025975 Carpinus fangiana HOM05D005074 ORTHO05D006853 5.9e-08 63.9 189 27.5
Aa31LG1G19680 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.9e-06 58.9 77 45.5
Actinidia11567 Actinidia chinensis HOM05D005074 ORTHO05D006853 2.5e-06 58.5 86 43.0


User provided reference genes

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