Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO330G0001 Papaver somniferum HOM05D003226 ORTHO05D005723 2.4e-39 165.2 96 100.0
Aqoxy5G00921 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 1.3e-29 132.9 96 79.2
Dinv33760 Davidia involucrata HOM05D003226 ORTHO05D005723 6.6e-29 130.6 95 74.7
Aqoxy6G02361 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 1.1e-28 129.8 96 75.0
Potri.017G083200 Populus trichocarpa HOM05D003226 ORTHO05D005723 1.5e-28 129.4 96 75.0
vmacro05694 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 1.5e-28 129.4 96 74.0
Dinv05919 Davidia involucrata HOM05D003226 ORTHO05D005723 2.5e-28 128.6 96 74.0
Aqoxy5G00799 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 4.3e-28 127.9 96 77.1
Rhsim10G0039000 Rhododendron simsii HOM05D003226 ORTHO05D005723 4.3e-28 127.9 96 72.9
Atru.chr8.162 Acer truncatum HOM05D003226 ORTHO05D005723 1.6e-27 125.9 96 71.9
Rhsim07G0120700 Rhododendron simsii HOM05D003226 ORTHO05D005723 4.7e-27 124.4 96 69.8
TWI34G0415 Tripterygium wilfordii HOM05D003226 ORTHO05D005723 4.7e-27 124.4 96 71.9
Sabra17G0073700 Salix brachista HOM05D003226 ORTHO05D005723 8.0e-27 123.6 96 70.8
Manes.02G046500 Manihot esculenta HOM05D003226 ORTHO05D005723 1.1e-26 123.2 96 70.8
Prupe.3G267300 Prunus persica HOM05D003226 ORTHO05D005723 5.2e-26 120.9 96 70.8
Cpa.g.sc140.54 Carica papaya HOM05D003226 ORTHO05D005723 8.9e-26 120.2 96 68.8
MD02G1198100 Malus domestica HOM05D003226 ORTHO05D005723 2.0e-25 119.0 96 69.8
Thecc.04G082300 Theobroma cacao HOM05D003226 ORTHO05D005723 3.4e-25 118.2 96 67.7
Ca_22432_v3 Cicer arietinum L. HOM05D003226 ORTHO05D005723 4.4e-25 117.9 96 68.8
PSO170G5698 Papaver somniferum HOM05D003226 ORTHO05D005723 4.4e-25 117.9 68 100.0
TPR.G36529 Trifolium pratense HOM05D003226 ORTHO05D005723 4.4e-25 117.9 96 69.8
Medtr8g072890 Medicago truncatula HOM05D003226 ORTHO05D005723 7.5e-25 117.1 96 69.8
A06p40240 Brassica napus HOM05D003226 ORTHO05D005723 9.8e-25 116.7 96 67.7
BraA06t26939Z Brassica rapa HOM05D003226 ORTHO05D005723 9.8e-25 116.7 96 67.7
Oeu035695.1 Olea europaea HOM05D003226 ORTHO05D005723 9.8e-25 116.7 95 68.4
BcaC06g33656 Brassica carinata HOM05D003226 ORTHO05D005723 1.3e-24 116.3 96 66.7
AT5G48600 Arabidopsis thaliana HOM05D003226 ORTHO05D005723 2.2e-24 115.5 96 66.7
Actinidia06098 Actinidia chinensis HOM05D003226 ORTHO05D005723 2.9e-24 115.2 96 67.7
Lj7C393G0 Lonicera japonica HOM05D003226 ORTHO05D005723 2.9e-24 115.2 90 72.2
MBI18_g02834_MAGBIO Magnolia biondii HOM05D003226 ORTHO05D005723 2.9e-24 115.2 87 75.9
PSO017G5293 Papaver somniferum HOM05D003226 ORTHO05D005723 2.9e-24 115.2 68 98.5
Cc07_g03380 Coffea canephora HOM05D003226 ORTHO05D005723 1.4e-23 112.8 96 67.7
QL11p027129 Quercus lobata HOM05D003226 ORTHO05D005723 1.9e-23 112.5 89 69.7
RcHm_v2.0_Chr6g0300801 Rosa chinensis HOM05D003226 ORTHO05D005723 1.9e-23 112.5 96 65.6
EL10Ac2g02987 Beta vulgaris HOM05D003226 ORTHO05D005723 3.2e-23 111.7 96 64.6
C07p37860 Brassica napus HOM05D003226 ORTHO05D005723 3.2e-23 111.7 96 65.6
BolC7t44308H Brassica oleracea HOM05D003226 ORTHO05D005723 4.1e-23 111.3 96 64.6
MELO3C022910.2 Cucumis melo HOM05D003226 ORTHO05D005723 5.4e-23 110.9 96 67.7
CsaV3_5G027630 Cucumis sativus L. HOM05D003226 ORTHO05D005723 7.1e-23 110.5 96 66.7
Aqoxy293s003 Aquilegia oxysepala HOM05D003226 ORTHO05D005723 9.2e-23 110.2 96 69.8
ATR0605G313 Amborella trichopoda HOM05D003226 ORTHO05D005723 2.1e-22 109.0 95 65.3
RcHm_v2.0_Chr7g0226461 Rosa chinensis HOM05D003226 ORTHO05D005723 2.7e-22 108.6 96 62.5
Medtr7g091430 Medicago truncatula HOM05D003226 ORTHO05D005723 3.5e-22 108.2 96 65.6
ClCG11G000030 Citrullus lanatus HOM05D003226 ORTHO05D005723 4.6e-22 107.8 96 64.6
Phvul.004G029000 Phaseolus vulgaris HOM05D003226 ORTHO05D005723 7.8e-22 107.1 96 63.5
AUR62029891 Chenopodium quinoa HOM05D003226 ORTHO05D005723 2.3e-21 105.5 96 61.5
Nitab4.5_0004308g0020 Nicotiana tabacum HOM05D003226 ORTHO05D005723 2.3e-21 105.5 96 61.5
Peaxi162Scf00011g02911 Petunia axillaris HOM05D003226 ORTHO05D005723 3.0e-21 105.1 96 61.5
FvH4_5g30910 Fragaria vesca HOM05D003226 ORTHO05D005723 6.6e-21 104.0 96 61.5
RcHm_v2.0_Chr7g0223741 Rosa chinensis HOM05D003226 ORTHO05D005723 6.6e-21 104.0 96 60.4
VMungo0464G1600 Vigna mungo HOM05D003226 ORTHO05D005723 6.6e-21 104.0 96 62.5
AUR62034416 Chenopodium quinoa HOM05D003226 ORTHO05D005723 1.1e-20 103.2 96 60.4
Nitab4.5_0000274g0210 Nicotiana tabacum HOM05D003226 ORTHO05D005723 1.5e-20 102.8 96 61.5
vmacro02215 Vaccinium macrocarpon HOM05D003226 ORTHO05D005723 1.5e-20 102.8 96 62.5
AL8G21600 Arabidopsis lyrata HOM05D003226 ORTHO05D005723 1.9e-20 102.4 85 67.1
CARHR037400 Cardamine hirsuta HOM05D003226 ORTHO05D005723 5.6e-20 100.9 85 67.1
Ah.10g031620 Amaranthus hybridus HOM05D003226 ORTHO05D005723 1.2e-19 99.8 96 57.3
CSS0044326 Camellia sinensis var. sinensis HOM05D003226 ORTHO05D005723 1.6e-19 99.4 96 62.5
Oeu062107.2 Olea europaea HOM05D003226 ORTHO05D005723 2.8e-19 98.6 95 61.1
Ciclev10010934m.g Citrus clementina HOM05D003226 ORTHO05D005723 6.2e-19 97.4 96 58.3
Os05g0497150 Oryza sativa ssp. japonica HOM05D003226 ORTHO05D005723 1.1e-18 96.7 96 61.5
Peaxi162Scf00129g00132 Petunia axillaris HOM05D003226 ORTHO05D005723 1.4e-18 96.3 83 66.3
Lsat_1_v5_gn_3_101601 Lactuca sativa HOM05D003226 ORTHO05D005723 6.8e-18 94.0 74 71.6
HPP92_015724 Vanilla planifolia HOM05D003226 ORTHO05D005723 6.8e-18 94.0 96 56.2
Zm00001eb291710 Zea mays HOM05D003226 ORTHO05D005723 6.8e-18 94.0 87 62.1
Psat4g106040 Pisum sativum HOM05D003226 ORTHO05D005723 8.9e-18 93.6 81 67.9
GSVIVG01011404001 Vitis vinifera HOM05D003226 ORTHO05D005723 1.2e-17 93.2 82 63.4
CANSAT64G2675 Cannabis sativa HOM05D003226 ORTHO05D005723 2.6e-17 92.0 68 75.0
Carub.0005s0749 Capsella rubella HOM05D003226 ORTHO05D005723 3.4e-17 91.7 78 66.7
QL02p063973 Quercus lobata HOM05D003226 ORTHO05D005723 3.4e-17 91.7 96 57.3
AUR62039793 Chenopodium quinoa HOM05D003226 ORTHO05D005723 9.9e-17 90.1 96 59.4
unitig_899.g15524 Utricularia gibba HOM05D003226 ORTHO05D005723 1.3e-16 89.7 77 63.6
TAR381G0539 Trochodendron aralioides HOM05D003226 ORTHO05D005723 2.2e-16 89.0 96 58.3
TAR375G0513 Trochodendron aralioides HOM05D003226 ORTHO05D005723 4.9e-16 87.8 96 57.3
Sp2g17560 Schrenkiella parvula HOM05D003226 ORTHO05D005723 6.4e-16 87.4 73 67.1
CAN.G206.153 Capsicum annuum HOM05D003226 ORTHO05D005723 8.3e-16 87.0 70 68.6
PGSC0003DMG400001326 Solanum tuberosum HOM05D003226 ORTHO05D005723 1.1e-15 86.7 68 69.1
Thhalv10003529m.g Eutrema salsugineum HOM05D003226 ORTHO05D005723 1.4e-15 86.3 75 65.3
Aa31LG2G4270 Aethionema arabicum HOM05D003226 ORTHO05D005723 1.9e-15 85.9 71 66.2
Sopen02g032720 Solanum pennellii HOM05D003226 ORTHO05D005723 2.4e-15 85.5 69 66.7
Lalb_Chr21g0318701 Lupinus albus HOM05D003226 ORTHO05D005723 7.1e-15 84.0 94 55.3
Hund08915 Selenicereus undatus HOM05D003226 ORTHO05D005723 9.2e-15 83.6 69 68.1
SGA_v2.0_scaffold499G52482 Striga asiatica HOM05D003226 ORTHO05D005723 9.2e-15 83.6 96 55.2
Solyc02g087980.3 Solanum lycopersicum HOM05D003226 ORTHO05D005723 1.6e-14 82.8 96 53.1
Duzib187G0629 Durio zibethinus HOM05D003226 ORTHO05D005723 6.0e-14 80.9 96 53.1
PGR004G1048 Punica granatum HOM05D003226 ORTHO05D005723 7.8e-14 80.5 69 69.6
FAN20G3149 Fragaria x ananassa HOM05D003226 ORTHO05D005723 1.0e-13 80.1 96 53.1
Actinidia17346 Actinidia chinensis HOM05D003226 ORTHO05D005723 1.3e-13 79.7 69 68.1
Glyma.19G022800 Glycine max HOM05D003226 ORTHO05D005723 1.3e-13 79.7 96 51.0
Actinidia17343 Actinidia chinensis HOM05D003226 ORTHO05D005723 3.9e-13 78.2 94 56.4
Sed0013037 Sechium edule HOM05D003226 ORTHO05D005723 8.6e-13 77.0 68 66.2
Glyma.13G062800 Glycine max HOM05D003226 ORTHO05D005723 1.5e-12 76.3 96 50.0
COL.COLO4_33309 Corchorus olitorius HOM05D003226 ORTHO05D005723 5.6e-12 74.3 55 72.7
Gohir.A09G016100 Gossypium hirsutum HOM05D003226 ORTHO05D005723 5.6e-12 74.3 55 74.5
Gohir.D09G014800 Gossypium hirsutum HOM05D003226 ORTHO05D005723 5.6e-12 74.3 55 74.5
Gorai.006G016800 Gossypium raimondii HOM05D003226 ORTHO05D005723 5.6e-12 74.3 55 74.5
GSVIVG01011408001 Vitis vinifera HOM05D003226 ORTHO05D005723 5.6e-12 74.3 95 50.5
SalBow1G4412 Salvia bowleyana HOM05D003226 ORTHO05D005723 7.3e-12 73.9 68 63.2
Sc14g0005870 Simmondsia chinensis HOM05D003226 ORTHO05D005723 9.6e-12 73.6 96 46.9
SGA_v2.0_scaffold1G00329 Striga asiatica HOM05D003226 ORTHO05D005723 2.8e-11 72.0 51 74.5
FAN15G3277 Fragaria x ananassa HOM05D003226 ORTHO05D005723 6.2e-11 70.9 96 49.0
Hma1.2p1_0409F.1_g146951 Hydrangea macrophylla HOM05D003226 ORTHO05D005723 5.2e-10 67.8 165 37.0
Cfa007554 Carpinus fangiana HOM05D003226 ORTHO05D005723 6.8e-10 67.4 54 66.7
Migut.H00924 Erythranthe guttata HOM05D003226 ORTHO05D005723 6.8e-10 67.4 53 69.8
arahy.Tifrunner.gnm1.ann1.R713I2 Arachis hypogaea HOM05D003226 ORTHO05D005723 1.2e-09 66.6 55 67.3
CiPaw.03G026700 Carya illinoinensis HOM05D003226 ORTHO05D005723 1.2e-09 66.6 66 60.6
arahy.Tifrunner.gnm1.ann1.WKF5J8 Arachis hypogaea HOM05D003226 ORTHO05D005723 1.5e-09 66.2 55 67.3
Eucgr.I01943 Eucalyptus grandis HOM05D003226 ORTHO05D005723 2.6e-09 65.5 69 58.0
Nn4g25634 Nelumbo nucifera HOM05D003226 ORTHO05D005723 3.4e-09 65.1 81 54.3
FAN18G4273 Fragaria x ananassa HOM05D003226 ORTHO05D005723 9.9e-09 63.5 96 43.8
Lj4g0003862 Lotus japonicus HOM05D003226 ORTHO05D005723 1.3e-08 63.2 53 66.0
Mapoly0189s0011 Marchantia polymorpha HOM05D003226 ORTHO05D005723 1.7e-08 62.8 95 38.9
Pp3c18_16050 Physcomitrium patens HOM05D003226 ORTHO05D005723 2.9e-08 62.0 96 39.6
FvH4_2g39941 Fragaria vesca HOM05D003226 ORTHO05D005723 1.1e-07 60.1 89 46.1
Haze_14528 Corylus avellana HOM05D003226 ORTHO05D005723 4.2e-07 58.2 90 44.4
AagrBONN_evm.TU.Sc2ySwM_368.939 Anthoceros agrestis HOM05D003226 ORTHO05D005723 1.2e-06 56.6 95 38.9
DCAR_025375 Daucus carota HOM05D003226 ORTHO05D005723 1.2e-06 56.6 50 64.0
PGSC0003DMG400006628 Solanum tuberosum HOM05D003226 ORTHO05D005723 2.1e-06 55.8 42 71.4


User provided reference genes

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