Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO266G0061 Papaver somniferum HOM05D001937 ORTHO05D003828 1.4e-136 490.0 320 100.0
PSO063G3818 Papaver somniferum HOM05D001937 ORTHO05D003828 3.3e-40 169.9 196 51.0
PSO782G5216 Papaver somniferum HOM05D001937 ORTHO05D003828 4.0e-38 162.9 196 49.5
PSO384G4225 Papaver somniferum HOM05D003118 ORTHO05D003618 5.6e-32 142.5 187 46.0
PSO675G8698 Papaver somniferum HOM05D001937 ORTHO05D003828 3.1e-30 136.7 276 37.7
PSO266G0025 Papaver somniferum HOM05D048025 ORTHO05D003828 3.7e-28 129.8 319 34.5
TAR374G1188 Trochodendron aralioides HOM05D001937 ORTHO05D003828 1.9e-24 117.5 221 39.4
Aqoxy4G02410 Aquilegia oxysepala HOM05D001937 ORTHO05D003828 7.3e-24 115.5 209 36.8
CiPaw.05G030600 Carya illinoinensis HOM05D001937 ORTHO05D003828 1.2e-23 114.8 208 37.0
Actinidia28033 Actinidia chinensis HOM05D001937 ORTHO05D003828 1.8e-22 110.9 172 39.5
TWI23G0701 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 3.4e-21 106.7 213 37.1
Nn1g09835 Nelumbo nucifera HOM05D001937 ORTHO05D003828 5.8e-21 105.9 204 39.2
PSO384G0103 Papaver somniferum HOM05D048025 ORTHO05D003618 9.9e-21 105.1 117 52.1
Ciclev10004125m.g Citrus clementina HOM05D001937 ORTHO05D003828 8.4e-20 102.1 210 37.6
Prupe.1G559000 Prunus persica HOM05D001937 ORTHO05D003828 4.1e-19 99.8 214 35.5
Cc02_g20980 Coffea canephora HOM05D001937 ORTHO05D003828 1.2e-18 98.2 214 36.4
GSVIVG01020528001 Vitis vinifera HOM05D001937 ORTHO05D003828 2.7e-18 97.1 214 35.5
CDE08G1500 Ceratophyllum demersum HOM05D001937 ORTHO05D003828 7.8e-18 95.5 219 36.5
Rhsim05G0102300 Rhododendron simsii HOM05D001937 ORTHO05D003828 7.8e-18 95.5 203 33.0
Ciclev10004140m.g Citrus clementina HOM05D001937 ORTHO05D003828 1.3e-17 94.7 202 36.6
Migut.B00560 Erythranthe guttata HOM05D001937 ORTHO05D003828 1.3e-17 94.7 213 34.7
Sabra07G0092600 Salix brachista HOM05D001937 ORTHO05D003828 1.7e-17 94.4 211 37.9
COL.COLO4_05351 Corchorus olitorius HOM05D001937 ORTHO05D003828 2.3e-17 94.0 194 36.1
Nn2g11723 Nelumbo nucifera HOM05D001937 ORTHO05D003828 3.0e-17 93.6 204 36.8
Eucgr.I02627 Eucalyptus grandis HOM05D001937 ORTHO05D003828 5.1e-17 92.8 200 34.5
CSS0032005 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.1e-16 91.7 173 37.0
CSS0037154 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D003828 1.1e-16 91.7 173 37.0
vmacro19954 Vaccinium macrocarpon HOM05D001937 ORTHO05D003828 1.9e-16 90.9 203 33.5
QL03p072736 Quercus lobata HOM05D001937 ORTHO05D003828 5.6e-16 89.4 211 33.2
QL12p030812 Quercus lobata HOM05D001937 ORTHO05D003828 7.3e-16 89.0 211 33.2
Lj2C174G11 Lonicera japonica HOM05D001937 ORTHO05D003828 1.2e-15 88.2 177 33.9
EL10Ac3g06089 Beta vulgaris HOM05D001937 ORTHO05D003828 1.6e-15 87.8 177 37.3
Nitab4.5_0000244g0410 Nicotiana tabacum HOM05D001937 ORTHO05D003828 1.6e-15 87.8 213 31.9
Dinv24157 Davidia involucrata HOM05D001937 ORTHO05D003828 2.1e-15 87.4 210 32.9
DCAR_008727 Daucus carota HOM05D001937 ORTHO05D003828 4.7e-15 86.3 210 33.8
AUR62023793 Chenopodium quinoa HOM05D001937 ORTHO05D003828 6.2e-15 85.9 189 33.9
Sabra17G0032100 Salix brachista HOM05D001937 ORTHO05D003828 1.1e-14 85.1 211 34.6
ATR1120G087 Amborella trichopoda HOM05D001937 ORTHO05D003828 1.4e-14 84.7 211 30.8
FAN26G2897 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.8e-14 84.3 217 35.0
Manes.07G036600 Manihot esculenta HOM05D001937 ORTHO05D003828 1.8e-14 84.3 213 32.9
MELO3C021095.2 Cucumis melo HOM05D001937 ORTHO05D003828 2.4e-14 84.0 209 32.5
FAN23G0892 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.4e-14 84.0 212 33.5
Thecc.04G168700 Theobroma cacao HOM05D001937 ORTHO05D003828 4.0e-14 83.2 173 33.5
CsaV3_7G026510 Cucumis sativus L. HOM05D001937 ORTHO05D003828 5.2e-14 82.8 209 33.0
FAN19G2543 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.9e-14 82.4 206 32.5
MD04G1047300 Malus domestica HOM05D001937 ORTHO05D003828 6.9e-14 82.4 207 32.4
ClCG09G008530 Citrullus lanatus HOM05D001937 ORTHO05D003828 1.2e-13 81.6 209 31.1
Hund12383 Selenicereus undatus HOM05D001937 ORTHO05D003828 1.2e-13 81.6 177 35.0
FvH4_3g05980 Fragaria vesca HOM05D001937 ORTHO05D003828 1.5e-13 81.3 206 33.0
Psat2g142560 Pisum sativum HOM05D001937 ORTHO05D003828 1.5e-13 81.3 219 34.2
PGR042G3669 Punica granatum HOM05D001937 ORTHO05D003828 1.5e-13 81.3 202 33.2
Potri.007G113300 Populus trichocarpa HOM05D001937 ORTHO05D003828 2.0e-13 80.9 211 34.6
Glyma.09G215000 Glycine max HOM05D001937 ORTHO05D003828 2.6e-13 80.5 216 32.4
RcHm_v2.0_Chr3g0492481 Rosa chinensis HOM05D001937 ORTHO05D003828 3.4e-13 80.1 214 32.2
Duzib212G0078 Durio zibethinus HOM05D001937 ORTHO05D003828 7.6e-13 79.0 175 32.6
CAN.G584.7 Capsicum annuum HOM05D001937 ORTHO05D003828 9.9e-13 78.6 173 34.1
FAN25G3599 Fragaria x ananassa HOM05D001937 ORTHO05D003828 1.3e-12 78.2 206 32.0
Nitab4.5_0005574g0040 Nicotiana tabacum HOM05D001937 ORTHO05D003828 1.3e-12 78.2 213 31.0
Solyc07g006820.4 Solanum lycopersicum HOM05D001937 ORTHO05D003828 1.3e-12 78.2 201 32.8
Lj2g0019889 Lotus japonicus HOM05D001937 ORTHO05D003828 1.7e-12 77.8 213 30.5
Sopen07g002920 Solanum pennellii HOM05D001937 ORTHO05D003828 1.7e-12 77.8 203 31.5
FAN11G3092 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.2e-12 77.4 209 31.6
AL1G47030 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.9e-12 77.0 207 32.4
RcHm_v2.0_Chr5g0013481 Rosa chinensis HOM05D001937 ORTHO05D003828 2.9e-12 77.0 200 33.5
Thhalv10006532m.g Eutrema salsugineum HOM05D001937 ORTHO05D003828 3.8e-12 76.6 208 34.1
unitig_46.g18832 Utricularia gibba HOM05D001937 ORTHO05D003828 4.9e-12 76.3 213 31.0
FAN28G0964 Fragaria x ananassa HOM05D001937 ORTHO05D003828 6.4e-12 75.9 207 34.3
AT1G32750 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 1.9e-11 74.3 205 31.2
Lsat_1_v5_gn_6_102941 Lactuca sativa HOM05D001937 ORTHO05D003828 1.9e-11 74.3 174 33.3
Sp1g28210 Schrenkiella parvula HOM05D001937 ORTHO05D003828 2.4e-11 73.9 207 32.4
Potri.017G047600 Populus trichocarpa HOM05D001937 ORTHO05D003828 4.2e-11 73.2 212 32.1
AUR62002404 Chenopodium quinoa HOM05D001937 ORTHO05D003828 7.1e-11 72.4 156 34.0
Gohir.D10G124300 Gossypium hirsutum HOM05D001937 ORTHO05D003828 7.1e-11 72.4 176 32.4
Carub.0001s3108 Capsella rubella HOM05D001937 ORTHO05D003828 9.3e-11 72.0 205 31.2
Gorai.011G137400 Gossypium raimondii HOM05D001937 ORTHO05D003828 9.3e-11 72.0 176 32.4
Sc25g0001620 Simmondsia chinensis HOM05D001937 ORTHO05D003828 9.3e-11 72.0 218 31.7
Gohir.A10G142200 Gossypium hirsutum HOM05D001937 ORTHO05D003828 2.7e-10 70.5 176 31.2
AT3G19040 Arabidopsis thaliana HOM05D001937 ORTHO05D003828 4.6e-10 69.7 159 34.0
HanXRQChr05g0162901 Helianthus annuus HOM05D001937 ORTHO05D003828 7.8e-10 68.9 178 34.3
HanXRQChr06g0170531 Helianthus annuus HOM05D001937 ORTHO05D003828 7.8e-10 68.9 178 34.3
BcaC07g37602 Brassica carinata HOM05D001937 ORTHO05D003828 1.0e-09 68.6 210 33.3
CANSAT11G1347 Cannabis sativa HOM05D001937 ORTHO05D003828 1.0e-09 68.6 212 32.1
AL3G32430 Arabidopsis lyrata HOM05D001937 ORTHO05D003828 2.3e-09 67.4 204 30.4
BcaB04g17964 Brassica carinata HOM05D001937 ORTHO05D003828 5.1e-09 66.2 210 32.9
BolC8t47960H Brassica oleracea HOM05D001937 ORTHO05D003828 5.1e-09 66.2 210 32.4
DCAR_019148 Daucus carota HOM05D001937 ORTHO05D003828 5.1e-09 66.2 147 35.4
A08p09140 Brassica napus HOM05D001937 ORTHO05D003828 6.6e-09 65.9 210 32.4
BraA08t32916Z Brassica rapa HOM05D001937 ORTHO05D003828 6.6e-09 65.9 210 32.4
VMungo1215G1229 Vigna mungo HOM05D001937 ORTHO05D003828 6.6e-09 65.9 217 29.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 8.7e-09 65.5 206 32.5
FvH4_1g29900 Fragaria vesca HOM05D001937 ORTHO05D003828 8.7e-09 65.5 210 31.4
FAN21G3055 Fragaria x ananassa HOM05D001937 ORTHO05D003828 2.5e-08 63.9 209 29.2
Cpa.g.sc177.20 Carica papaya HOM05D001937 ORTHO05D003828 5.6e-08 62.8 109 33.9
Os06g0645800 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D003828 5.6e-08 62.8 200 26.0
Sp3g17140 Schrenkiella parvula HOM05D001937 ORTHO05D003828 1.6e-07 61.2 151 33.8
TWI14G0424 Tripterygium wilfordii HOM05D001937 ORTHO05D003828 2.1e-07 60.8 199 28.6
HPP92_017202 Vanilla planifolia HOM05D001937 ORTHO05D003828 2.1e-07 60.8 208 28.8
Aa31LG2G13230 Aethionema arabicum HOM05D001937 ORTHO05D003828 3.6e-07 60.1 166 30.7
Phvul.002G127400 Phaseolus vulgaris HOM05D001937 ORTHO05D003828 3.6e-07 60.1 217 27.6
CARHR032130 Cardamine hirsuta HOM05D001937 ORTHO05D003828 4.8e-07 59.7 165 32.1
Rhsim05G0102700 Rhododendron simsii HOM05D001937 ORTHO05D009414 4.8e-07 59.7 166 28.3
Atru.chr8.1124 Acer truncatum HOM05D001937 ORTHO05D003828 6.2e-07 59.3 196 30.6
BcaC09g48870 Brassica carinata HOM05D001937 ORTHO05D003828 6.2e-07 59.3 185 30.8
C01p44990 Brassica napus HOM05D001937 ORTHO05D003828 6.2e-07 59.3 185 30.8
Ca_25089_v3 Cicer arietinum L. HOM05D001937 ORTHO05D003828 8.1e-07 58.9 213 26.8
ECA246G2336 Erigeron canadensis HOM05D001937 ORTHO05D003828 8.1e-07 58.9 181 28.2
SEGI_35630 Sequoiadendron giganteum HOM05D001937 ORTHO05D003828 8.1e-07 58.9 105 34.3
Peaxi162Scf00610g00377 Petunia axillaris HOM05D001937 ORTHO05D003828 1.4e-06 58.2 164 30.5
A01p35430 Brassica napus HOM05D001937 ORTHO05D003828 1.8e-06 57.8 185 30.3
BcaB04g20722 Brassica carinata HOM05D001937 ORTHO05D003828 2.4e-06 57.4 185 31.4
THA.LOC104811101 Tarenaya hassleriana HOM05D001937 ORTHO05D003828 2.4e-06 57.4 205 31.2
Glyma.04G123500 Glycine max HOM05D001937 ORTHO05D003828 5.3e-06 56.2 210 28.1
BraA01t03625Z Brassica rapa HOM05D001937 ORTHO05D003828 6.9e-06 55.8 193 30.1
BolC1t04467H Brassica oleracea HOM05D001937 ORTHO05D003828 9.0e-06 55.5 191 31.4


User provided reference genes

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