Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO210G6350 Papaver somniferum HOM05D000006 ORTHO05D004030 4.2e-189 664.5 318 100.0
PSO675G4731 Papaver somniferum HOM05D000006 ORTHO05D004030 9.4e-72 274.6 313 47.9
PSO541G6025 Papaver somniferum HOM05D000006 ORTHO05D004030 1.1e-69 267.7 313 47.6
THA.LOC104819319 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 7.7e-42 175.3 293 34.5
BcaB08g37162 Brassica carinata HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
BcaB08g37191 Brassica carinata HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
A10p27700 Brassica napus HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
C09p67790 Brassica napus HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
BolC9t59541H Brassica oleracea HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
BraA10t44822Z Brassica rapa HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
Thhalv10013550m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 3.8e-41 172.9 293 33.4
SalBow7G0198 Salvia bowleyana HOM05D000006 ORTHO05D004030 3.8e-41 172.9 286 35.3
SalBow7G3631 Salvia bowleyana HOM05D000006 ORTHO05D004030 3.8e-41 172.9 286 35.3
Medtr3g007710 Medicago truncatula HOM05D000006 ORTHO05D004030 5.0e-41 172.6 286 35.0
Lj3g0019564 Lotus japonicus HOM05D000006 ORTHO05D004030 6.5e-41 172.2 286 34.6
Actinidia03495 Actinidia chinensis HOM05D000006 ORTHO05D004030 1.1e-40 171.4 286 34.6
Aa31LG3G17360 Aethionema arabicum HOM05D000006 ORTHO05D004030 1.1e-40 171.4 293 33.1
AL6G20140 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 1.1e-40 171.4 293 33.1
Psat5g230080 Pisum sativum HOM05D000006 ORTHO05D004030 1.1e-40 171.4 237 38.8
Sabra05G0129200 Salix brachista HOM05D000006 ORTHO05D004030 1.1e-40 171.4 286 34.6
arahy.Tifrunner.gnm1.ann1.6W1W5K Arachis hypogaea HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
arahy.Tifrunner.gnm1.ann1.B54JNT Arachis hypogaea HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
Ca_14036_v3 Cicer arietinum L. HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.8
Ciclev10001133m.g Citrus clementina HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
Cc04_g08910 Coffea canephora HOM05D000006 ORTHO05D004030 1.5e-40 171.0 286 34.6
Glyma.04G130300 Glycine max HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
Glyma.06G316400 Glycine max HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
Phvul.005G010700 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 1.5e-40 171.0 286 34.3
Phvul.005G011500 Phaseolus vulgaris HOM05D000006 ORTHO05D004030 1.5e-40 171.0 286 34.3
Potri.002G089500 Populus trichocarpa HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.4
Sc23g0000920 Simmondsia chinensis HOM05D000006 ORTHO05D004030 1.5e-40 171.0 237 38.0
VMungo1080G1349 Vigna mungo HOM05D000006 ORTHO05D004030 1.5e-40 171.0 286 34.3
Hund16820 Selenicereus undatus HOM05D000006 ORTHO05D004030 1.9e-40 170.6 237 38.4
TPR.G12257 Trifolium pratense HOM05D000006 ORTHO05D004030 1.9e-40 170.6 286 34.6
CBR_g17677 Chara braunii HOM05D000006 ORTHO05D004030 2.5e-40 170.2 237 37.6
Lalb_Chr18g0049021 Lupinus albus HOM05D000006 ORTHO05D004030 2.5e-40 170.2 237 38.0
TWI79G1190 Tripterygium wilfordii HOM05D000006 ORTHO05D004030 2.5e-40 170.2 286 34.6
Potri.005G171700 Populus trichocarpa HOM05D000006 ORTHO05D004030 3.2e-40 169.9 237 38.4
Sc01g0001570 Simmondsia chinensis HOM05D000006 ORTHO05D004030 3.2e-40 169.9 237 37.6
THA.LOC104799527 Tarenaya hassleriana HOM05D000006 ORTHO05D004030 3.2e-40 169.9 237 38.0
MSTRG.22428 Avicennia marina HOM05D000006 ORTHO05D004030 4.2e-40 169.5 237 38.4
EL10Ac1g00041 Beta vulgaris HOM05D000006 ORTHO05D004030 4.2e-40 169.5 237 38.4
CANSAT56G0745 Cannabis sativa HOM05D000006 ORTHO05D004030 4.2e-40 169.5 237 38.0
Sp6g33660 Schrenkiella parvula HOM05D000006 ORTHO05D004030 4.2e-40 169.5 286 33.9
CiPaw.05G229200 Carya illinoinensis HOM05D000006 ORTHO05D004030 7.2e-40 168.7 237 37.6
CiPaw.06G024600 Carya illinoinensis HOM05D000006 ORTHO05D004030 7.2e-40 168.7 237 37.6
Dinv27386 Davidia involucrata HOM05D000006 ORTHO05D004030 7.2e-40 168.7 237 38.4
QL05p058776 Quercus lobata HOM05D000006 ORTHO05D004030 7.2e-40 168.7 237 38.0
SMO351G0268 Selaginella moellendorffii HOM05D000006 ORTHO05D004030 7.2e-40 168.7 237 38.0
Atru.chr13.1315 Acer truncatum HOM05D000006 ORTHO05D004030 9.4e-40 168.3 237 37.6
Atru.chr13.1359 Acer truncatum HOM05D000006 ORTHO05D004030 9.4e-40 168.3 237 37.6
AL8G42020 Arabidopsis lyrata HOM05D000006 ORTHO05D004030 9.4e-40 168.3 286 33.2
AT5G64610 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 9.4e-40 168.3 286 33.2
Carub.0008s2540 Capsella rubella HOM05D000006 ORTHO05D004030 9.4e-40 168.3 286 33.2
CARHR278580 Cardamine hirsuta HOM05D000006 ORTHO05D004030 9.4e-40 168.3 286 33.2
COL.COLO4_21821 Corchorus olitorius HOM05D000006 ORTHO05D004030 9.4e-40 168.3 237 38.0
Thhalv10004220m.g Eutrema salsugineum HOM05D000006 ORTHO05D004030 9.4e-40 168.3 286 33.2
HanXRQChr02g0044231 Helianthus annuus HOM05D000006 ORTHO05D004030 9.4e-40 168.3 237 38.0
Prupe.1G506200 Prunus persica HOM05D000006 ORTHO05D004030 1.2e-39 167.9 286 33.9
Cfa015957 Carpinus fangiana HOM05D000006 ORTHO05D004030 1.6e-39 167.5 237 37.1
Haze_00526 Corylus avellana HOM05D000006 ORTHO05D004030 1.6e-39 167.5 237 37.1
SalBow6G6076 Salvia bowleyana HOM05D000006 ORTHO05D004030 1.6e-39 167.5 237 38.0
Aa31LG1G17340 Aethionema arabicum HOM05D000006 ORTHO05D004030 2.1e-39 167.2 286 32.9
AT5G09740 Arabidopsis thaliana HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 37.6
BcaB04g19978 Brassica carinata HOM05D000006 ORTHO05D004030 2.1e-39 167.2 286 33.2
Eucgr.F04379 Eucalyptus grandis HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Gohir.A05G231900 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Gohir.D05G234200 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Gohir.D06G041700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Gorai.009G242400 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Gorai.010G046900 Gossypium raimondii HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Nitab4.5_0000051g0130 Nicotiana tabacum HOM05D000006 ORTHO05D004030 2.1e-39 167.2 286 34.3
Oeu001989.1 Olea europaea HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
Sp2g27670 Schrenkiella parvula HOM05D000006 ORTHO05D004030 2.1e-39 167.2 286 33.2
Thecc.08G116400 Theobroma cacao HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
unitig_21.g20189 Utricularia gibba HOM05D000006 ORTHO05D004030 2.1e-39 167.2 286 34.3
GSVIVG01008945001 Vitis vinifera HOM05D000006 ORTHO05D004030 2.1e-39 167.2 237 38.0
MSTRG.24147 Avicennia marina HOM05D000006 ORTHO05D004030 2.7e-39 166.8 237 38.0
Actinidia23042 Actinidia chinensis HOM05D000006 ORTHO05D004030 3.6e-39 166.4 237 37.6
AUR62004690 Chenopodium quinoa HOM05D000006 ORTHO05D004030 3.6e-39 166.4 291 34.4
Dinv26721 Davidia involucrata HOM05D000006 ORTHO05D004030 3.6e-39 166.4 237 38.0
Gohir.A06G040700 Gossypium hirsutum HOM05D000006 ORTHO05D004030 3.6e-39 166.4 237 38.0
DCAR_014281 Daucus carota HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 38.0
Migut.N03322 Erythranthe guttata HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 37.6
Nitab4.5_0002496g0060 Nicotiana tabacum HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 38.0
Solyc11g013520.3 Solanum lycopersicum HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 38.0
Sopen11g008540 Solanum pennellii HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 38.0
HPP92_004738 Vanilla planifolia HOM05D000006 ORTHO05D004030 4.7e-39 166.0 237 37.6
BcaC04g23307 Brassica carinata HOM05D000006 ORTHO05D004030 6.1e-39 165.6 286 32.9
A09p08740 Brassica napus HOM05D000006 ORTHO05D004030 6.1e-39 165.6 286 32.9
C09p09880 Brassica napus HOM05D000006 ORTHO05D004030 6.1e-39 165.6 286 32.9
BolC9t53896H Brassica oleracea HOM05D000006 ORTHO05D004030 6.1e-39 165.6 286 32.9
BraA09t36523Z Brassica rapa HOM05D000006 ORTHO05D004030 6.1e-39 165.6 286 32.9
CSS0012091 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D004030 8.0e-39 165.2 237 37.1
Pp3c4_18030 Physcomitrium patens HOM05D000006 ORTHO05D004030 8.0e-39 165.2 237 37.6
PGR142G3648 Punica granatum HOM05D000006 ORTHO05D004030 8.0e-39 165.2 237 37.1
TAR381G0924 Trochodendron aralioides HOM05D000006 ORTHO05D004030 8.0e-39 165.2 237 37.6
TAR625G0616 Trochodendron aralioides HOM05D000006 ORTHO05D004030 8.0e-39 165.2 237 37.6
Ah.05g172680 Amaranthus hybridus HOM05D000006 ORTHO05D004030 1.0e-38 164.9 191 43.5
MD08G1173300 Malus domestica HOM05D000006 ORTHO05D004030 1.0e-38 164.9 237 37.1
MD15G1358600 Malus domestica HOM05D000006 ORTHO05D004030 1.0e-38 164.9 237 37.1
Zm00001eb328000 Zea mays HOM05D000006 ORTHO05D004030 1.0e-38 164.9 237 38.0
CARHR203660 Cardamine hirsuta HOM05D000006 ORTHO05D004030 1.4e-38 164.5 226 37.6
Lsat_1_v5_gn_1_12240 Lactuca sativa HOM05D000006 ORTHO05D004030 1.4e-38 164.5 237 37.6
Aqoxy5G01525 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 1.8e-38 164.1 237 37.1
Rhsim11G0065000 Rhododendron simsii HOM05D000006 ORTHO05D004030 1.8e-38 164.1 247 36.8
RcHm_v2.0_Chr7g0240841 Rosa chinensis HOM05D000006 ORTHO05D004030 1.8e-38 164.1 237 37.1
SEGI_25942 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.3e-38 163.7 237 37.1
ATR0564G159 Amborella trichopoda HOM05D000006 ORTHO05D004030 3.0e-38 163.3 237 36.3
Lj4A550G32 Lonicera japonica HOM05D000006 ORTHO05D004030 3.0e-38 163.3 286 33.2
Lj4A578G72 Lonicera japonica HOM05D000006 ORTHO05D004030 3.0e-38 163.3 286 33.2
Mapoly0014s0119 Marchantia polymorpha HOM05D000006 ORTHO05D004030 3.0e-38 163.3 237 37.1
MELO3C022788.2 Cucumis melo HOM05D000006 ORTHO05D004030 6.8e-38 162.2 237 37.1
CsaV3_5G023540 Cucumis sativus L. HOM05D000006 ORTHO05D004030 6.8e-38 162.2 237 37.1
ECA247G3040 Erigeron canadensis HOM05D000006 ORTHO05D000091 6.8e-38 162.2 237 37.1
PSO210G6583 Papaver somniferum HOM05D000006 ORTHO05D004030 6.8e-38 162.2 237 37.1
PSO447G0296 Papaver somniferum HOM05D000006 ORTHO05D004030 6.8e-38 162.2 237 37.1
FvH4_5g38850 Fragaria vesca HOM05D000006 ORTHO05D004030 8.8e-38 161.8 237 37.1
FAN04G0021 Fragaria x ananassa HOM05D000006 ORTHO05D004030 8.8e-38 161.8 237 37.1
FAN18G2681 Fragaria x ananassa HOM05D000006 ORTHO05D004030 8.8e-38 161.8 237 37.1
Sabra02G0070500 Salix brachista HOM05D000006 ORTHO05D004030 8.8e-38 161.8 249 36.5
FAN08G2703 Fragaria x ananassa HOM05D000006 ORTHO05D004030 1.2e-37 161.4 237 37.1
Os07g0626600 Oryza sativa ssp. japonica HOM05D000006 ORTHO05D004030 1.2e-37 161.4 237 37.6
AagrBONN_evm.TU.Sc2ySwM_344.1570 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.5e-37 161.0 237 36.7
Sed0027470 Sechium edule HOM05D000006 ORTHO05D004030 1.5e-37 161.0 286 33.2
Duzib093G0061 Durio zibethinus HOM05D000006 ORTHO05D004030 2.0e-37 160.6 191 41.9
FAN13G0359 Fragaria x ananassa HOM05D000006 ORTHO05D004030 2.0e-37 160.6 237 37.1
Nn1g05200 Nelumbo nucifera HOM05D000006 ORTHO05D004030 2.6e-37 160.2 237 36.7
Oeu039581.2 Olea europaea HOM05D000006 ORTHO05D004030 9.8e-37 158.3 258 35.7
Aqoxy6G00495 Aquilegia oxysepala HOM05D000006 ORTHO05D004030 3.7e-36 156.4 173 41.6
TAR628G0303 Trochodendron aralioides HOM05D000006 ORTHO05D004030 3.7e-36 156.4 163 43.6
SGA_v2.0_scaffold25G11094 Striga asiatica HOM05D000006 ORTHO05D004030 6.3e-36 155.6 163 44.2
Peaxi162Scf00360g00314 Petunia axillaris HOM05D000006 ORTHO05D004030 2.4e-35 153.7 261 34.9
ClCG03G009080 Citrullus lanatus HOM05D000006 ORTHO05D004030 9.1e-35 151.8 163 44.2
Haze_26687 Corylus avellana HOM05D000006 ORTHO05D004030 1.2e-34 151.4 267 34.1
CAN.G255.14 Capsicum annuum HOM05D000006 ORTHO05D004030 3.5e-34 149.8 237 36.3
CAN.G222.83 Capsicum annuum HOM05D000006 ORTHO05D004030 4.5e-34 149.4 200 40.0
Mapoly0014s0220 Marchantia polymorpha HOM05D000006 ORTHO05D004030 2.3e-33 147.1 341 27.9
Cre03.g143907 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 1.5e-32 144.4 240 31.7
vmacro12808 Vaccinium macrocarpon HOM05D000006 ORTHO05D004030 3.3e-32 143.3 295 31.5
PRCOL_00001934 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 5.5e-32 142.5 245 33.9
Haze_26200 Corylus avellana HOM05D000006 ORTHO05D004030 1.4e-30 137.9 230 36.5
AUR62023606 Chenopodium quinoa HOM05D000006 ORTHO05D004030 3.4e-29 133.3 286 30.8
Cre13.g587150 Chlamydomonas reinhardtii HOM05D000006 ORTHO05D004030 5.7e-29 132.5 246 32.1
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 7.5e-29 132.1 292 30.1
Pp3c2_37980 Physcomitrium patens HOM05D000006 ORTHO05D004030 7.5e-29 132.1 206 34.0
MCO10G273 Micromonas commoda HOM05D000006 ORTHO05D004030 9.8e-29 131.7 243 34.2
Haze_27167 Corylus avellana HOM05D000006 ORTHO05D004030 1.3e-28 131.3 193 36.3
MCO09G855 Micromonas commoda HOM05D000006 ORTHO05D004030 1.7e-28 131.0 248 33.5
Cfa025466 Carpinus fangiana HOM05D000006 ORTHO05D004030 2.8e-28 130.2 235 31.9
Cfa027305 Carpinus fangiana HOM05D000006 ORTHO05D004030 4.9e-28 129.4 247 32.0
Lj7C307G3 Lonicera japonica HOM05D000006 ORTHO05D004030 6.3e-28 129.0 237 33.3
PRCOL_00006094 Prasinoderma coloniale HOM05D000006 ORTHO05D004030 1.1e-27 128.3 250 32.0
Duzib116G0798 Durio zibethinus HOM05D000006 ORTHO05D004030 1.8e-27 127.5 237 32.9
MCO10G130 Micromonas commoda HOM05D000006 ORTHO05D004030 1.8e-27 127.5 218 32.6
SEGI_33287 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.4e-27 127.1 190 34.7
MBI04_g34117_MAGBIO Magnolia biondii HOM05D000006 ORTHO05D004030 9.2e-27 125.2 237 32.1
SGA_v2.0_scaffold28G12032 Striga asiatica HOM05D000006 ORTHO05D004030 2.7e-26 123.6 151 41.7
Cpa.g.sc42.141 Carica papaya HOM05D000006 ORTHO05D004030 7.3e-24 115.5 188 35.1
Manes.18G072700 Manihot esculenta HOM05D000006 ORTHO05D004030 3.1e-22 110.2 185 34.6
Haze_26386 Corylus avellana HOM05D000006 ORTHO05D004030 5.2e-22 109.4 261 31.0
Nn5g28927 Nelumbo nucifera HOM05D000006 ORTHO05D004030 1.2e-21 108.2 185 34.6
SEGI_04115 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 6.6e-17 92.4 156 30.8
CAN.G959.48 Capsicum annuum HOM05D000006 ORTHO05D004030 1.1e-16 91.7 114 40.4
Zm00001eb109790 Zea mays HOM05D000006 ORTHO05D004030 3.3e-16 90.1 81 49.4
CDE02G1825 Ceratophyllum demersum HOM05D000006 ORTHO05D004030 1.8e-14 84.3 160 31.2
TAR376G0202 Trochodendron aralioides HOM05D000006 ORTHO05D004030 2.6e-13 80.5 80 43.8
FAN25G2177 Fragaria x ananassa HOM05D000006 ORTHO05D004030 2.7e-10 70.5 78 41.0
SEGI_24978 Sequoiadendron giganteum HOM05D000006 ORTHO05D004030 2.5e-08 63.9 130 33.8
BcaC01g02690 Brassica carinata HOM05D000006 ORTHO05D004030 5.6e-08 62.8 129 32.6


User provided reference genes

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