Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G5566 Papaver somniferum HOM05D005942 ORTHO05D007209 0.0e+00 1406.3 765 100.0
PSO017G1617 Papaver somniferum HOM05D005942 ORTHO05D007209 0.0e+00 1341.3 778 91.3
TAR624G0006 Trochodendron aralioides HOM05D005942 ORTHO05D007209 5.3e-246 854.7 772 60.0
Aqoxy7G00926 Aquilegia oxysepala HOM05D005942 ORTHO05D007209 1.8e-238 829.7 678 64.0
Nn3g21985 Nelumbo nucifera HOM05D005942 ORTHO05D007209 6.2e-231 804.7 762 57.2
GSVIVG01016664001 Vitis vinifera HOM05D005942 ORTHO05D007209 1.5e-221 773.5 676 61.2
Dinv37817 Davidia involucrata HOM05D005942 ORTHO05D007209 7.7e-221 771.2 666 61.4
Dinv20380 Davidia involucrata HOM05D005942 ORTHO05D007209 3.8e-220 768.8 680 61.5
MBI13_g01657_MAGBIO Magnolia biondii HOM05D005942 ORTHO05D007209 4.2e-219 765.4 680 60.9
CSS0026354 Camellia sinensis var. sinensis HOM05D005942 ORTHO05D007209 1.7e-215 753.4 645 61.2
Thecc.06G130500 Theobroma cacao HOM05D005942 ORTHO05D007209 1.4e-214 750.4 680 58.7
QL05p001132 Quercus lobata HOM05D005942 ORTHO05D007209 5.9e-213 745.0 680 58.2
QL05p000862 Quercus lobata HOM05D005942 ORTHO05D007209 5.0e-212 741.9 680 57.9
Ciclev10024928m.g Citrus clementina HOM05D005942 ORTHO05D007209 4.2e-211 738.8 682 58.8
TWI14G0802 Tripterygium wilfordii HOM05D005942 ORTHO05D007209 1.2e-210 737.3 685 56.8
CANSAT56G3801 Cannabis sativa HOM05D005942 ORTHO05D007209 1.0e-209 734.2 625 60.5
CiPaw.02G130800 Carya illinoinensis HOM05D005942 ORTHO05D007209 2.3e-209 733.0 682 57.0
Hma1.2p1_0090F.1_g045800 Hydrangea macrophylla HOM05D005942 ORTHO05D007209 2.3e-209 733.0 620 61.1
Lj9C538T8 Lonicera japonica HOM05D005942 ORTHO05D007209 3.3e-208 729.2 716 56.3
Rhsim08G0245000 Rhododendron simsii HOM05D005942 ORTHO05D007209 3.1e-206 722.6 670 57.9
Potri.003G073000 Populus trichocarpa HOM05D005942 ORTHO05D007209 1.2e-205 720.7 611 60.7
Duzib192G0321 Durio zibethinus HOM05D005942 ORTHO05D007209 1.9e-203 713.4 678 57.7
Gohir.D05G144100 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.9e-203 713.4 619 60.4
Gorai.009G148000 Gossypium raimondii HOM05D005942 ORTHO05D007209 1.9e-203 713.4 619 60.6
Prupe.3G030900 Prunus persica HOM05D005942 ORTHO05D007209 5.5e-203 711.8 672 56.2
COL.COLO4_30871 Corchorus olitorius HOM05D005942 ORTHO05D007209 7.2e-203 711.4 610 60.2
PGR102G3180 Punica granatum HOM05D005942 ORTHO05D007209 8.0e-202 708.0 620 58.7
FvH4_6g35860 Fragaria vesca HOM05D005942 ORTHO05D007209 2.6e-200 703.0 682 56.7
Gohir.A05G141800 Gossypium hirsutum HOM05D005942 ORTHO05D007209 1.3e-199 700.7 679 57.0
Carub.0002s1918 Capsella rubella HOM05D005942 ORTHO05D007209 3.1e-198 696.0 605 59.2
Haze_16138 Corylus avellana HOM05D005942 ORTHO05D007209 3.1e-198 696.0 832 48.3
DCAR_007660 Daucus carota HOM05D005942 ORTHO05D007209 7.0e-198 694.9 684 54.7
FAN09G3780 Fragaria x ananassa HOM05D005942 ORTHO05D007209 1.6e-197 693.7 682 56.3
Cc04_g00670 Coffea canephora HOM05D005942 ORTHO05D007209 2.0e-197 693.3 676 55.9
CsaV3_7G033920 Cucumis sativus L. HOM05D005942 ORTHO05D007209 2.7e-197 693.0 762 49.5
Sabra03G0043700 Salix brachista HOM05D005942 ORTHO05D007209 3.5e-197 692.6 709 54.2
RcHm_v2.0_Chr2g0147901 Rosa chinensis HOM05D005942 ORTHO05D007209 5.9e-197 691.8 683 56.5
Thhalv10018182m.g Eutrema salsugineum HOM05D005942 ORTHO05D007209 2.2e-196 689.9 604 58.8
FAN14G4637 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.9e-196 689.5 682 56.0
Aa31LG4G2680 Aethionema arabicum HOM05D005942 ORTHO05D007209 3.8e-196 689.1 604 58.8
ClCG09G001410 Citrullus lanatus HOM05D005942 ORTHO05D007209 8.5e-196 688.0 775 48.6
Sp5g27400 Schrenkiella parvula HOM05D005942 ORTHO05D007209 1.1e-195 687.6 604 58.3
PGSC0003DMG400009149 Solanum tuberosum HOM05D005942 ORTHO05D007209 1.1e-195 687.6 656 56.1
ECA234G0243 Erigeron canadensis HOM05D005942 ORTHO05D007209 5.5e-195 685.3 673 54.8
MSTRG.10908 Avicennia marina HOM05D005942 ORTHO05D007209 2.1e-194 683.3 706 53.4
CAN.G790.55 Capsicum annuum HOM05D005942 ORTHO05D007209 3.6e-194 682.6 657 55.9
THA.LOC104813965 Tarenaya hassleriana HOM05D005942 ORTHO05D007209 1.4e-193 680.6 676 55.5
Peaxi162Scf00038g02336 Petunia axillaris HOM05D005942 ORTHO05D007209 1.8e-193 680.2 614 57.5
Sopen03g041410 Solanum pennellii HOM05D005942 ORTHO05D007209 2.3e-193 679.9 655 55.3
AT1G72320 Arabidopsis thaliana HOM05D005942 ORTHO05D007209 3.0e-193 679.5 605 57.7
VMungo1309G0067 Vigna mungo HOM05D005942 ORTHO05D007209 4.0e-193 679.1 608 56.2
AL2G32000 Arabidopsis lyrata HOM05D005942 ORTHO05D007209 5.2e-193 678.7 605 57.7
FAN02G3526 Fragaria x ananassa HOM05D005942 ORTHO05D007209 5.2e-193 678.7 704 54.1
Phvul.009G261600 Phaseolus vulgaris HOM05D005942 ORTHO05D007209 3.4e-192 676.0 611 55.3
Solyc03g123640.3 Solanum lycopersicum HOM05D005942 ORTHO05D007209 9.8e-192 674.5 652 54.8
Sed0028190 Sechium edule HOM05D005942 ORTHO05D007209 2.8e-191 672.9 678 53.1
MELO3C024305.2 Cucumis melo HOM05D005942 ORTHO05D007209 8.3e-191 671.4 768 48.8
CARHR065220 Cardamine hirsuta HOM05D005942 ORTHO05D007209 2.7e-189 666.4 605 57.0
SalBow7G4809 Salvia bowleyana HOM05D005942 ORTHO05D007209 7.7e-189 664.8 699 51.9
Lalb_Chr15g0076691 Lupinus albus HOM05D005942 ORTHO05D007209 1.0e-188 664.5 621 55.2
Glyma.03G263200 Glycine max HOM05D005942 ORTHO05D007209 1.7e-188 663.7 681 52.4
A07p38500 Brassica napus HOM05D005942 ORTHO05D007209 2.9e-188 662.9 604 56.0
CDE04G3550 Ceratophyllum demersum HOM05D005942 ORTHO05D007209 1.1e-187 661.0 708 53.5
BcaC08g46688 Brassica carinata HOM05D005942 ORTHO05D007209 1.5e-187 660.6 605 55.9
SGA_v2.0_scaffold122G33306 Striga asiatica HOM05D005942 ORTHO05D007209 2.5e-187 659.8 655 54.0
MD09G1172500 Malus domestica HOM05D005942 ORTHO05D007209 5.5e-187 658.7 687 52.4
BraA07t31410Z Brassica rapa HOM05D005942 ORTHO05D007209 7.2e-187 658.3 606 55.6
Eucgr.J02595 Eucalyptus grandis HOM05D005942 ORTHO05D007209 7.2e-187 658.3 693 52.7
BolC6t39713H Brassica oleracea HOM05D005942 ORTHO05D007209 9.4e-187 657.9 606 55.6
Nitab4.5_0006338g0060 Nicotiana tabacum HOM05D005942 ORTHO05D007209 9.4e-187 657.9 657 54.6
TPR.G28866 Trifolium pratense HOM05D005942 ORTHO05D007209 9.4e-187 657.9 621 54.6
C06p46680 Brassica napus HOM05D005942 ORTHO05D007209 1.2e-186 657.5 606 55.6
AUR62001402 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.2e-186 657.5 615 55.4
Atru.chr1.4156 Acer truncatum HOM05D005942 ORTHO05D007209 8.0e-186 654.8 682 54.1
AUR62025613 Chenopodium quinoa HOM05D005942 ORTHO05D007209 1.8e-185 653.7 615 55.4
Lj1g0014309 Lotus japonicus HOM05D005942 ORTHO05D007209 6.8e-185 651.7 680 50.7
Lsat_1_v5_gn_5_137681 Lactuca sativa HOM05D005942 ORTHO05D007209 8.8e-185 651.4 673 52.7
Manes.04G151100 Manihot esculenta HOM05D005942 ORTHO05D007209 8.8e-185 651.4 618 56.5
Medtr7g117545 Medicago truncatula HOM05D005942 ORTHO05D007209 4.9e-183 645.6 624 53.4
Oeu019509.2 Olea europaea HOM05D005942 ORTHO05D007209 1.4e-182 644.0 543 61.1
Migut.I01134 Erythranthe guttata HOM05D005942 ORTHO05D007209 1.8e-182 643.7 630 53.3
EL10Ac7g16496 Beta vulgaris HOM05D005942 ORTHO05D007209 4.1e-182 642.5 625 55.0
Psat6g168240 Pisum sativum HOM05D005942 ORTHO05D007209 1.3e-180 637.5 610 53.4
Ah.15g094920 Amaranthus hybridus HOM05D005942 ORTHO05D007209 1.7e-180 637.1 633 54.0
arahy.Tifrunner.gnm1.ann1.SXV5N5 Arachis hypogaea HOM05D005942 ORTHO05D007209 1.7e-180 637.1 619 52.8
Ca_07883_v3 Cicer arietinum L. HOM05D005942 ORTHO05D007209 1.5e-179 634.0 621 53.5
BcaB03g14980 Brassica carinata HOM05D005942 ORTHO05D007209 3.3e-179 632.9 604 55.3
vmacro18719 Vaccinium macrocarpon HOM05D005942 ORTHO05D007209 4.3e-179 632.5 596 56.9
ATR0099G013 Amborella trichopoda HOM05D005942 ORTHO05D007209 1.0e-177 627.9 670 50.6
Cfa003459 Carpinus fangiana HOM05D005942 ORTHO05D007209 5.7e-176 622.1 1033 38.4
Hund18636 Selenicereus undatus HOM05D005942 ORTHO05D007209 1.8e-174 617.1 629 52.8
FAN05G1996 Fragaria x ananassa HOM05D005942 ORTHO05D007209 2.0e-165 587.0 612 53.8
Sc12g0011030 Simmondsia chinensis HOM05D005942 ORTHO05D007209 4.6e-165 585.9 568 54.2
HanXRQChr10g0311801 Helianthus annuus HOM05D005942 ORTHO05D007209 8.6e-164 581.6 677 48.6
Zm00001eb028000 Zea mays HOM05D005942 ORTHO05D007209 2.8e-162 576.6 621 50.6
HPP92_016652 Vanilla planifolia HOM05D005942 ORTHO05D007209 7.5e-160 568.5 621 49.6
Nitab4.5_0001873g0040 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.7e-148 530.8 655 47.6
AUR62043501 Chenopodium quinoa HOM05D005942 ORTHO05D007209 2.9e-135 486.9 483 52.8
Nitab4.5_0007678g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.1e-131 474.9 632 45.4
Actinidia24424 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.7e-114 416.8 403 55.1
unitig_62.g23675 Utricularia gibba HOM05D005942 ORTHO05D007209 5.0e-103 379.8 627 38.0
Mapoly0020s0016 Marchantia polymorpha HOM05D005942 ORTHO05D007209 3.6e-101 373.6 645 37.1
Pp3c10_6430 Physcomitrium patens HOM05D005942 ORTHO05D007209 4.6e-101 373.2 657 36.5
arahy.Tifrunner.gnm1.ann1.UMP4HF Arachis hypogaea HOM05D005942 ORTHO05D007209 6.1e-101 372.9 393 49.6
Cpa.g.sc25.196 Carica papaya HOM05D005942 ORTHO05D007209 6.5e-95 352.8 285 60.0
AagrBONN_evm.TU.Sc2ySwM_369.233 Anthoceros agrestis HOM05D005942 ORTHO05D007209 1.5e-91 341.7 575 35.5
CAN.G635.25 Capsicum annuum HOM05D005942 ORTHO05D007209 8.8e-84 315.8 611 36.3
SMO118G0133 Selaginella moellendorffii HOM05D005942 ORTHO05D007209 3.7e-82 310.5 569 35.1
HPP92_016646 Vanilla planifolia HOM05D005942 ORTHO05D007209 5.0e-79 300.1 325 49.8
Nitab4.5_0001873g0030 Nicotiana tabacum HOM05D005942 ORTHO05D007209 1.8e-68 265.0 641 33.1
Cpa.g.sc25.195 Carica papaya HOM05D005942 ORTHO05D007209 2.4e-65 254.6 192 66.7
MCO05G275 Micromonas commoda HOM05D005942 ORTHO05D007209 9.8e-59 232.6 610 29.3
HPP92_016647 Vanilla planifolia HOM05D005942 ORTHO05D007209 1.7e-55 221.9 268 45.5
Cre16.g649600 Chlamydomonas reinhardtii HOM05D005942 ORTHO05D007209 4.9e-42 177.2 630 22.9
CBR_g4864 Chara braunii HOM05D005942 ORTHO05D007209 3.8e-34 151.0 792 23.5
CAN.G635.26 Capsicum annuum HOM05D005942 ORTHO05D007209 1.6e-32 145.6 172 49.4
SEGI_33476 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 1.7e-31 142.1 248 39.9
Sabra01G0130200 Salix brachista HOM05D005942 ORTHO05D007209 5.1e-31 140.6 609 26.1
PRCOL_00005763 Prasinoderma coloniale HOM05D005942 ORTHO05D007209 1.2e-27 129.4 509 25.3
SEGI_14143 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 6.4e-26 123.6 145 46.2
Actinidia21840 Actinidia chinensis HOM05D005942 ORTHO05D007209 5.6e-22 110.5 171 40.4
BolC2t09032H Brassica oleracea HOM05D005942 ORTHO05D007209 1.4e-17 95.9 92 54.3
Glyma.19G262250 Glycine max HOM05D005942 ORTHO05D007209 6.0e-16 90.5 91 48.4
Actinidia21839 Actinidia chinensis HOM05D005942 ORTHO05D007209 3.3e-14 84.7 63 63.5
C02p29840 Brassica napus HOM05D005942 ORTHO05D007209 9.6e-14 83.2 74 56.8
MBI15_g00935_MAGBIO Magnolia biondii HOM05D001716 ORTHO05D016670 5.8e-11 73.9 123 38.2
SGA_v2.0_scaffold253G45152 Striga asiatica HOM05D005942 ORTHO05D007209 1.3e-10 72.8 159 35.8
CBR_g19531 Chara braunii HOM05D005942 ORTHO05D007209 1.1e-09 69.7 259 26.3
Haze_02542 Corylus avellana HOM05D005942 ORTHO05D007209 1.9e-09 68.9 66 47.0
SEGI_28404 Sequoiadendron giganteum HOM05D005942 ORTHO05D007209 2.1e-08 65.5 73 42.5
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 3.3e-06 58.2 49 57.1


User provided reference genes

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