Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G2981 Papaver somniferum HOM05D005614 ORTHO05D006759 1.1e-175 619.8 308 100.0
PSO782G2082 Papaver somniferum HOM05D005614 ORTHO05D006759 3.1e-173 611.7 308 98.7
TAR628G1424 Trochodendron aralioides HOM05D005614 ORTHO05D006759 3.5e-132 475.3 291 80.1
GSVIVG01008884001 Vitis vinifera HOM05D005614 ORTHO05D006759 4.7e-129 464.9 298 77.9
Thecc.08G123600 Theobroma cacao HOM05D005614 ORTHO05D006759 1.2e-127 460.3 298 76.2
Gohir.A05G234600 Gossypium hirsutum HOM05D005614 ORTHO05D006759 3.4e-127 458.8 298 75.5
Atru.chr13.1437_Atru.chr13.1438 Acer truncatum HOM05D005614 ORTHO05D006759 7.5e-127 457.6 301 75.4
Dinv07241 Davidia involucrata HOM05D005614 ORTHO05D006759 2.2e-126 456.1 298 76.5
Potri.005G176600 Populus trichocarpa HOM05D005614 ORTHO05D006759 3.7e-126 455.3 299 74.9
Prupe.1G500100 Prunus persica HOM05D005614 ORTHO05D006759 8.3e-126 454.1 298 76.2
Aqoxy7G02121 Aquilegia oxysepala HOM05D005614 ORTHO05D006759 1.9e-125 453.0 301 75.7
Gorai.009G245300 Gossypium raimondii HOM05D005614 ORTHO05D006759 2.4e-125 452.6 298 74.8
Ciclev10002002m.g Citrus clementina HOM05D005614 ORTHO05D006759 1.2e-124 450.3 303 73.6
RcHm_v2.0_Chr6g0295621 Rosa chinensis HOM05D005614 ORTHO05D006759 1.2e-124 450.3 301 74.8
TWI79G0333 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.5e-124 448.7 300 75.3
QL09p035347 Quercus lobata HOM05D005614 ORTHO05D006759 4.6e-124 448.4 301 73.8
Sc01g0001200 Simmondsia chinensis HOM05D005614 ORTHO05D006759 1.3e-123 446.8 307 71.0
MD15G1351400 Malus domestica HOM05D005614 ORTHO05D006759 2.3e-123 446.0 299 75.3
CANSAT54G1242 Cannabis sativa HOM05D005614 ORTHO05D006759 3.0e-123 445.7 289 76.5
FvH4_2g26720 Fragaria vesca HOM05D005614 ORTHO05D006759 3.9e-123 445.3 299 73.9
Actinidia03480 Actinidia chinensis HOM05D005614 ORTHO05D006759 5.1e-123 444.9 298 74.2
PGR042G1492 Punica granatum HOM05D005614 ORTHO05D006759 2.5e-122 442.6 301 73.1
CSS0036035 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 7.3e-122 441.0 301 73.1
Cpa.g.sc36.54 Carica papaya HOM05D005614 ORTHO05D006759 1.8e-120 436.4 298 73.2
CiPaw.05G223000 Carya illinoinensis HOM05D005614 ORTHO05D006759 3.1e-120 435.6 289 75.1
RhsimUnG0093400 Rhododendron simsii HOM05D005614 ORTHO05D006759 1.2e-119 433.7 299 72.2
Sed0025863 Sechium edule HOM05D005614 ORTHO05D006759 1.2e-119 433.7 298 70.8
AL1G30720 Arabidopsis lyrata HOM05D005614 ORTHO05D006759 1.5e-119 433.3 302 72.2
Thhalv10008316m.g Eutrema salsugineum HOM05D005614 ORTHO05D006759 1.5e-119 433.3 303 71.3
THA.LOC104806819 Tarenaya hassleriana HOM05D005614 ORTHO05D006759 2.0e-119 433.0 302 71.2
AT1G18340 Arabidopsis thaliana HOM05D005614 ORTHO05D006759 4.4e-119 431.8 302 71.9
CARHR138110 Cardamine hirsuta HOM05D005614 ORTHO05D006759 4.4e-119 431.8 304 71.7
BcaB07g31845 Brassica carinata HOM05D005614 ORTHO05D006759 1.7e-118 429.9 303 70.3
CSS0020697 Camellia sinensis var. sinensis HOM05D005614 ORTHO05D006759 2.9e-118 429.1 302 71.9
CAN.G628.77 Capsicum annuum HOM05D005614 ORTHO05D006759 3.8e-118 428.7 297 71.0
Sp1g16310 Schrenkiella parvula HOM05D005614 ORTHO05D006759 3.8e-118 428.7 303 70.3
A06p14370 Brassica napus HOM05D005614 ORTHO05D006759 1.9e-117 426.4 303 70.0
BcaB03g12976 Brassica carinata HOM05D005614 ORTHO05D006759 7.1e-117 424.5 304 69.7
Aa31LG6G9300 Aethionema arabicum HOM05D005614 ORTHO05D006759 9.2e-117 424.1 302 70.2
C05p16610 Brassica napus HOM05D005614 ORTHO05D006759 9.2e-117 424.1 303 69.6
BraA06t24565Z Brassica rapa HOM05D005614 ORTHO05D006759 1.2e-116 423.7 303 69.6
CsaV3_2G009350 Cucumis sativus L. HOM05D005614 ORTHO05D006759 1.2e-116 423.7 279 74.2
HanXRQChr02g0053121 Helianthus annuus HOM05D005614 ORTHO05D006759 2.1e-116 422.9 299 70.6
BolC5t30360H Brassica oleracea HOM05D005614 ORTHO05D006759 3.5e-116 422.2 303 69.6
PGSC0003DMG400026996 Solanum tuberosum HOM05D005614 ORTHO05D006759 6.0e-116 421.4 297 70.4
Lalb_Chr23g0270981 Lupinus albus HOM05D005614 ORTHO05D006759 7.8e-116 421.0 301 70.1
Ca_15193_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 1.0e-115 420.6 299 68.9
Carub.0001s1797 Capsella rubella HOM05D005614 ORTHO05D006759 1.3e-115 420.2 302 69.9
CARHR018930 Cardamine hirsuta HOM05D005614 ORTHO05D006759 1.3e-115 420.2 303 71.0
Solyc06g071450.4 Solanum lycopersicum HOM05D005614 ORTHO05D006759 1.3e-115 420.2 297 70.0
BcaC05g25728 Brassica carinata HOM05D005614 ORTHO05D006759 3.0e-115 419.1 305 68.9
HanXRQChr16g0532671 Helianthus annuus HOM05D005614 ORTHO05D006759 3.0e-115 419.1 299 69.6
Sopen06g027730 Solanum pennellii HOM05D005614 ORTHO05D006759 5.1e-115 418.3 297 69.7
BolC8t49486H Brassica oleracea HOM05D005614 ORTHO05D006759 6.6e-115 417.9 306 67.6
ClCG08G005590 Citrullus lanatus HOM05D005614 ORTHO05D006759 6.6e-115 417.9 335 64.2
DCAR_017415 Daucus carota HOM05D005614 ORTHO05D006759 6.6e-115 417.9 301 70.8
Lj1g0021555 Lotus japonicus HOM05D005614 ORTHO05D006759 6.6e-115 417.9 300 69.0
Oeu024691.1 Olea europaea HOM05D005614 ORTHO05D006759 6.6e-115 417.9 282 73.8
Migut.D01926 Erythranthe guttata HOM05D005614 ORTHO05D006759 1.5e-114 416.8 305 68.2
Rhsim11G0047100 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.5e-114 416.0 283 72.8
ECA246G0276 Erigeron canadensis HOM05D005614 ORTHO05D006759 9.6e-114 414.1 301 69.1
BraA08t34975Z Brassica rapa HOM05D005614 ORTHO05D006759 4.7e-113 411.8 298 68.8
FAN15G2492 Fragaria x ananassa HOM05D005614 ORTHO05D006759 6.2e-113 411.4 320 67.2
Medtr3g072430 Medicago truncatula HOM05D005614 ORTHO05D006759 6.2e-113 411.4 298 67.1
Nitab4.5_0000866g0090 Nicotiana tabacum HOM05D005614 ORTHO05D006759 6.2e-113 411.4 321 66.0
Sed0022578 Sechium edule HOM05D005614 ORTHO05D006759 1.1e-112 410.6 310 66.1
C08p18540 Brassica napus HOM05D005614 ORTHO05D006759 1.4e-112 410.2 297 67.7
FAN27G1664 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.8e-112 409.8 320 66.9
SalBow3G0912 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.8e-112 409.8 299 69.6
A08p30430 Brassica napus HOM05D005614 ORTHO05D006759 3.1e-112 409.1 298 69.1
Phvul.009G124300 Phaseolus vulgaris HOM05D005614 ORTHO05D006759 5.2e-112 408.3 299 68.6
Cc04_g13870 Coffea canephora HOM05D005614 ORTHO05D006759 9.0e-112 407.5 283 71.7
FAN20G0890 Fragaria x ananassa HOM05D005614 ORTHO05D006759 1.5e-111 406.8 275 73.5
vmacro14329 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 2.6e-111 406.0 287 71.4
COL.COLO4_35944 Corchorus olitorius HOM05D005614 ORTHO05D006759 1.3e-110 403.7 254 77.6
Glyma.04G250400 Glycine max HOM05D005614 ORTHO05D006759 2.2e-110 402.9 301 66.8
Glyma.06G112400 Glycine max HOM05D005614 ORTHO05D006759 8.4e-110 401.0 301 67.1
arahy.Tifrunner.gnm1.ann1.2VS3GS Arachis hypogaea HOM05D005614 ORTHO05D006759 5.4e-109 398.3 294 67.7
HPP92_013333 Vanilla planifolia HOM05D005614 ORTHO05D006759 5.4e-109 398.3 293 68.6
arahy.Tifrunner.gnm1.ann1.MKV7IN Arachis hypogaea HOM05D005614 ORTHO05D006759 9.3e-109 397.5 294 68.0
Nitab4.5_0001017g0060 Nicotiana tabacum HOM05D005614 ORTHO05D006759 6.0e-108 394.8 299 67.9
Duzib041G0760 Durio zibethinus HOM05D005614 ORTHO05D006759 2.8e-105 386.0 298 67.1
ATR0684G165 Amborella trichopoda HOM05D005614 ORTHO05D006759 3.1e-104 382.5 278 67.6
Os02g0125800 Oryza sativa ssp. japonica HOM05D005614 ORTHO05D006759 4.0e-104 382.1 296 64.2
Zm00001eb208710 Zea mays HOM05D005614 ORTHO05D006759 1.8e-99 366.7 302 62.3
Manes.02G162200 Manihot esculenta HOM05D005614 ORTHO05D006759 3.9e-99 365.5 247 76.1
EL10Ac1g01047 Beta vulgaris HOM05D005614 ORTHO05D006759 1.1e-98 364.0 261 70.1
AUR62027890 Chenopodium quinoa HOM05D005614 ORTHO05D006759 4.3e-98 362.1 247 72.5
Hund27024 Selenicereus undatus HOM05D005614 ORTHO05D006759 5.6e-98 361.7 249 73.1
Duzib093G1836 Durio zibethinus HOM05D005614 ORTHO05D006759 8.1e-97 357.8 325 60.0
Nn8g39974 Nelumbo nucifera HOM05D005614 ORTHO05D006759 8.1e-97 357.8 273 67.8
Ah.05g170870 Amaranthus hybridus HOM05D005614 ORTHO05D006759 1.5e-95 353.6 243 72.4
Lsat_1_v5_gn_3_69700 Lactuca sativa HOM05D005614 ORTHO05D006759 3.8e-94 349.0 245 72.2
Pp3c2_3680 Physcomitrium patens HOM05D005614 ORTHO05D006759 4.6e-92 342.0 302 57.0
Gohir.D05G236900 Gossypium hirsutum HOM05D005614 ORTHO05D006759 2.3e-91 339.7 207 78.3
Mapoly0044s0012 Marchantia polymorpha HOM05D005614 ORTHO05D006759 2.8e-89 332.8 298 55.4
MELO3C008774.2 Cucumis melo HOM05D005614 ORTHO05D006759 4.8e-89 332.0 208 77.4
SalBow7G1071 Salvia bowleyana HOM05D005614 ORTHO05D006759 1.4e-88 330.5 247 68.4
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 2.0e-79 300.1 218 69.7
Eucgr.G01112 Eucalyptus grandis HOM05D005614 ORTHO05D006759 3.4e-79 299.3 221 69.2
AUR62019050 Chenopodium quinoa HOM05D005614 ORTHO05D006759 5.0e-78 295.4 247 62.8
MBI03_g33030_MAGBIO Magnolia biondii HOM05D005614 ORTHO05D006759 1.2e-76 290.8 252 61.1
Sabra05G0133300 Salix brachista HOM05D005614 ORTHO05D006759 4.3e-74 282.3 292 55.1
FAN24G3468 Fragaria x ananassa HOM05D005614 ORTHO05D006759 2.8e-73 279.6 447 42.1
Nitab4.5_0000003g0570 Nicotiana tabacum HOM05D005614 ORTHO05D006759 3.1e-72 276.2 241 61.8
SGA_v2.0_scaffold31G12915 Striga asiatica HOM05D005614 ORTHO05D006759 1.2e-71 274.2 218 64.2
Oeu022164.1 Olea europaea HOM05D005614 ORTHO05D006759 1.2e-68 264.2 149 83.9
CDE06G0499 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 7.9e-68 261.5 186 68.8
Peaxi162Scf00689g00225 Petunia axillaris HOM05D005614 ORTHO05D006759 5.1e-67 258.8 223 61.9
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 8.8e-67 258.1 317 43.8
Haze_00457 Corylus avellana HOM05D005614 ORTHO05D006759 1.4e-61 240.7 184 67.9
vmacro00825 Vaccinium macrocarpon HOM05D005614 ORTHO05D006759 6.1e-60 235.3 195 64.6
TPR.G24041 Trifolium pratense HOM05D005614 ORTHO05D006759 3.5e-55 219.5 181 61.3
Psat5g132360 Pisum sativum HOM05D005614 ORTHO05D006759 3.3e-50 203.0 167 61.7
TWI75G0111 Tripterygium wilfordii HOM05D005614 ORTHO05D006759 3.3e-50 203.0 212 56.1
CDE12G0551 Ceratophyllum demersum HOM05D005614 ORTHO05D006759 5.3e-48 195.7 129 73.6
TPR.G40310 Trifolium pratense HOM05D001808 ORTHO05D001747 9.1e-48 194.9 111 78.4
Psat5g132400 Pisum sativum HOM05D005614 ORTHO05D006759 1.0e-46 191.4 122 73.0
Lj4A622G15 Lonicera japonica HOM05D005614 ORTHO05D006759 1.6e-44 184.1 98 89.8
SEGI_11087 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.4e-40 170.2 96 83.3
Cre03.g172050 Chlamydomonas reinhardtii HOM05D005614 ORTHO05D006759 3.8e-38 162.9 162 49.4
Lj4A622G16 Lonicera japonica HOM05D005614 ORTHO05D006759 8.3e-33 145.2 128 62.5
Haze_00458 Corylus avellana HOM05D005614 ORTHO05D006759 4.1e-32 142.9 80 80.0
SEGI_10746 Sequoiadendron giganteum HOM05D005614 ORTHO05D006759 2.0e-31 140.6 154 50.6
MCO01G384 Micromonas commoda HOM05D005614 ORTHO05D006759 2.5e-29 133.7 262 34.0
Cfa025530 Carpinus fangiana HOM05D005614 ORTHO05D006759 2.1e-28 130.6 352 29.5
SMO358G0086 Selaginella moellendorffii HOM05D005614 ORTHO05D006759 1.8e-27 127.5 163 46.0
QL09p036498 Quercus lobata HOM05D005614 ORTHO05D006759 9.8e-26 121.7 70 81.4
PRCOL_00005856 Prasinoderma coloniale HOM05D005614 ORTHO05D006759 8.3e-25 118.6 133 44.4
Ca_31116_v3 Cicer arietinum L. HOM05D005614 ORTHO05D006759 4.7e-20 102.8 94 58.5
CAN.G964.16 Capsicum annuum HOM05D005614 ORTHO05D006759 4.0e-19 99.8 108 53.7
RhsimUnG0102200 Rhododendron simsii HOM05D005614 ORTHO05D006759 2.1e-15 87.4 90 56.7
Rhsim02G0185400 Rhododendron simsii HOM05D005614 ORTHO05D006759 5.6e-13 79.3 87 51.7
Rhsim03G0117800 Rhododendron simsii HOM05D005614 ORTHO05D006759 9.9e-10 68.6 90 47.8
TPR.G32 Trifolium pratense HOM05D005614 ORTHO05D006759 2.2e-09 67.4 31 83.9
Cfa016005 Carpinus fangiana HOM05D005614 ORTHO05D006759 4.9e-09 66.2 50 66.0


User provided reference genes

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