Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO170G1401 Papaver somniferum HOM05D006016 ORTHO05D007553 1.3e-174 616.3 325 100.0
PSO407G0301 Papaver somniferum HOM05D006016 ORTHO05D007553 5.3e-163 577.8 330 94.8
Aqoxy2G03243 Aquilegia oxysepala HOM05D006016 ORTHO05D007553 1.8e-118 429.9 325 71.4
Potri.014G138500 Populus trichocarpa HOM05D006016 ORTHO05D007553 1.2e-114 417.2 328 68.0
Nn1g02145 Nelumbo nucifera HOM05D006016 ORTHO05D007553 1.0e-113 414.1 325 70.8
COL.COLO4_09142 Corchorus olitorius HOM05D006016 ORTHO05D007553 4.7e-111 405.2 330 67.6
PGR044G1280 Punica granatum HOM05D006016 ORTHO05D007553 1.4e-110 403.7 325 66.5
GSVIVG01011095001 Vitis vinifera HOM05D006016 ORTHO05D007553 2.0e-109 399.8 327 67.9
Prupe.8G244900 Prunus persica HOM05D006016 ORTHO05D007553 5.7e-109 398.3 326 68.7
MD03G1268900 Malus domestica HOM05D006016 ORTHO05D007553 6.3e-108 394.8 326 67.2
Oeu011169.1 Olea europaea HOM05D006016 ORTHO05D007553 1.1e-107 394.0 282 70.9
AUR62004906 Chenopodium quinoa HOM05D006016 ORTHO05D007553 1.4e-107 393.7 332 64.2
Haze_04746 Corylus avellana HOM05D006016 ORTHO05D007553 1.4e-107 393.7 283 71.7
Cfa006104 Carpinus fangiana HOM05D006016 ORTHO05D007553 1.8e-107 393.3 325 66.2
EL10Ac4g09090 Beta vulgaris HOM05D006016 ORTHO05D007553 3.1e-107 392.5 287 71.8
Duzib138G0992 Durio zibethinus HOM05D006016 ORTHO05D007553 4.1e-107 392.1 325 66.2
MD11G1289700 Malus domestica HOM05D006016 ORTHO05D007553 4.5e-106 388.7 325 66.2
CiPaw.07G094500 Carya illinoinensis HOM05D006016 ORTHO05D007553 1.0e-105 387.5 327 65.1
Manes.01G210000 Manihot esculenta HOM05D006016 ORTHO05D007553 1.3e-105 387.1 325 64.6
CSS0041846 Camellia sinensis var. sinensis HOM05D006016 ORTHO05D007553 2.9e-105 386.0 276 73.6
Nitab4.5_0007392g0030 Nicotiana tabacum HOM05D006016 ORTHO05D007553 2.9e-105 386.0 288 70.5
QL12p022630 Quercus lobata HOM05D006016 ORTHO05D007553 2.9e-105 386.0 327 65.1
Gohir.A08G069800 Gossypium hirsutum HOM05D006016 ORTHO05D007553 3.8e-105 385.6 325 63.7
Ciclev10020923m.g Citrus clementina HOM05D006016 ORTHO05D007553 8.6e-105 384.4 325 64.9
Nitab4.5_0006180g0080 Nicotiana tabacum HOM05D006016 ORTHO05D007553 8.6e-105 384.4 328 64.3
Migut.D00263 Erythranthe guttata HOM05D006016 ORTHO05D007553 1.5e-104 383.6 272 72.4
CANSAT80G0718 Cannabis sativa HOM05D006016 ORTHO05D007553 1.9e-104 383.3 324 65.1
Hma1.2p1_0628F.1_g191900 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 1.9e-104 383.3 269 73.6
Gorai.004G083400 Gossypium raimondii HOM05D006016 ORTHO05D007553 2.5e-104 382.9 330 63.6
RcHm_v2.0_Chr1g0321311 Rosa chinensis HOM05D006016 ORTHO05D007553 3.3e-104 382.5 285 70.9
Sed0013000 Sechium edule HOM05D006016 ORTHO05D007553 4.3e-104 382.1 329 64.1
Thecc.01G283800 Theobroma cacao HOM05D006016 ORTHO05D007553 4.3e-104 382.1 325 65.2
Eucgr.K03395 Eucalyptus grandis HOM05D006016 ORTHO05D007553 5.6e-104 381.7 297 69.4
SGA_v2.0_scaffold1G00448 Striga asiatica HOM05D006016 ORTHO05D007553 5.6e-104 381.7 275 73.1
ClCG07G000070 Citrullus lanatus HOM05D006016 ORTHO05D007553 1.2e-103 380.6 279 72.4
Eucgr.K03393 Eucalyptus grandis HOM05D006016 ORTHO05D007553 1.2e-103 380.6 276 73.9
Hund06953 Selenicereus undatus HOM05D006016 ORTHO05D007553 4.7e-103 378.6 326 63.5
TAR633G0970 Trochodendron aralioides HOM05D006016 ORTHO05D007553 1.0e-102 377.5 250 78.4
DCAR_002754 Daucus carota HOM05D006016 ORTHO05D007553 1.4e-102 377.1 325 62.8
ATR0626G088 Amborella trichopoda HOM05D006016 ORTHO05D007553 2.3e-102 376.3 271 72.0
MELO3C014346.2 Cucumis melo HOM05D006016 ORTHO05D007553 6.8e-102 374.8 279 71.3
Glyma.10G024400 Glycine max HOM05D006016 ORTHO05D007553 8.9e-102 374.4 285 69.5
Ca_09774_v3 Cicer arietinum L. HOM05D006016 ORTHO05D007553 3.4e-101 372.5 294 68.4
FvH4_7g02610 Fragaria vesca HOM05D006016 ORTHO05D007553 5.7e-101 371.7 285 69.8
THA.LOC104823056 Tarenaya hassleriana HOM05D006016 ORTHO05D007553 9.8e-101 370.9 326 62.6
PGSC0003DMG400000944 Solanum tuberosum HOM05D006016 ORTHO05D007553 2.9e-100 369.4 298 67.4
Sc05g0005010 Simmondsia chinensis HOM05D006016 ORTHO05D007553 3.7e-100 369.0 291 67.4
CARHR124900 Cardamine hirsuta HOM05D006016 ORTHO05D007553 6.4e-100 368.2 327 61.8
Cpa.g.sc485.5 Carica papaya HOM05D006016 ORTHO05D007553 6.4e-100 368.2 250 76.4
FAN03G2867 Fragaria x ananassa HOM05D006016 ORTHO05D007553 1.4e-99 367.1 288 68.8
Sopen09g026490 Solanum pennellii HOM05D006016 ORTHO05D007553 2.4e-99 366.3 301 66.8
AUR62032753 Chenopodium quinoa HOM05D006016 ORTHO05D007553 4.1e-99 365.5 248 74.6
Solyc09g064790.3 Solanum lycopersicum HOM05D006016 ORTHO05D007553 5.4e-99 365.2 298 67.1
MSTRG.18215 Avicennia marina HOM05D006016 ORTHO05D007553 7.0e-99 364.8 280 67.9
Medtr1g072640 Medicago truncatula HOM05D006016 ORTHO05D007553 7.0e-99 364.8 303 66.3
Carub.0004s3083 Capsella rubella HOM05D006016 ORTHO05D007553 1.2e-98 364.0 331 59.8
Peaxi162Scf00104g00220 Petunia axillaris HOM05D006016 ORTHO05D007553 2.0e-98 363.2 282 67.7
Atru.chr5.1361 Acer truncatum HOM05D006016 ORTHO05D007553 7.8e-98 361.3 287 67.9
arahy.Tifrunner.gnm1.ann1.Q6PPUG Arachis hypogaea HOM05D006016 ORTHO05D007553 1.7e-97 360.1 278 68.7
Rhsim01G0276200 Rhododendron simsii HOM05D006016 ORTHO05D007553 2.3e-97 359.8 423 50.8
Cc02_g34480 Coffea canephora HOM05D006016 ORTHO05D007553 3.0e-97 359.4 274 66.8
Sp4g30040 Schrenkiella parvula HOM05D006016 ORTHO05D007553 3.0e-97 359.4 322 60.9
CDE01G0302 Ceratophyllum demersum HOM05D006016 ORTHO05D007553 6.6e-97 358.2 276 67.8
arahy.Tifrunner.gnm1.ann1.NXI6YJ Arachis hypogaea HOM05D006016 ORTHO05D007553 1.9e-96 356.7 278 68.3
CAN.G962.6 Capsicum annuum HOM05D006016 ORTHO05D007553 1.9e-96 356.7 270 68.9
FAN01G1545 Fragaria x ananassa HOM05D006016 ORTHO05D007553 4.3e-96 355.5 285 67.0
BcaB02g08738 Brassica carinata HOM05D006016 ORTHO05D007553 5.6e-96 355.1 300 64.3
HanXRQChr01g0002401 Helianthus annuus HOM05D006016 ORTHO05D007553 7.3e-96 354.8 276 66.3
BraA05t18997Z Brassica rapa HOM05D006016 ORTHO05D007553 1.2e-95 354.0 326 61.0
Thhalv10001558m.g Eutrema salsugineum HOM05D006016 ORTHO05D007553 1.2e-95 354.0 323 61.6
HPP92_025128 Vanilla planifolia HOM05D006016 ORTHO05D007553 1.2e-95 354.0 292 64.0
Aa31LG4G3290 Aethionema arabicum HOM05D006016 ORTHO05D007553 2.8e-95 352.8 279 67.0
TPR.G1544 Trifolium pratense HOM05D000563 ORTHO05D000536 1.4e-94 350.5 283 67.5
SalBow4G2498 Salvia bowleyana HOM05D006016 ORTHO05D007553 2.3e-94 349.7 273 65.6
CsaV3_6G036870 Cucumis sativus L. HOM05D006016 ORTHO05D007553 3.1e-94 349.4 285 67.4
Lalb_Chr21g0306561 Lupinus albus HOM05D006016 ORTHO05D007553 5.2e-94 348.6 295 64.4
AL4G47720 Arabidopsis lyrata HOM05D006016 ORTHO05D007553 3.4e-93 345.9 329 58.4
Lsat_1_v5_gn_5_187441 Lactuca sativa HOM05D006016 ORTHO05D007553 3.4e-93 345.9 280 64.3
Lj2C1178T3 Lonicera japonica HOM05D006016 ORTHO05D007553 4.4e-93 345.5 236 73.7
Sabra14G0104500 Salix brachista HOM05D006016 ORTHO05D007553 9.8e-93 344.4 326 59.5
Os05g0393400 Oryza sativa ssp. japonica HOM05D006016 ORTHO05D007553 2.9e-92 342.8 273 64.8
A05p00010 Brassica napus HOM05D006016 ORTHO05D007553 4.9e-92 342.0 317 60.9
ECA248G0902 Erigeron canadensis HOM05D006016 ORTHO05D007553 8.3e-92 341.3 274 65.7
arahy.Tifrunner.gnm1.ann1.95RMVD Arachis hypogaea HOM05D006016 ORTHO05D007553 3.5e-90 335.9 285 64.6
BolC4t21679H Brassica oleracea HOM05D006016 ORTHO05D007553 3.5e-90 335.9 345 56.2
BolSC55t61226H Brassica oleracea HOM05D006016 ORTHO05D007553 1.0e-89 334.3 345 55.9
TWI14G0073 Tripterygium wilfordii HOM05D006016 ORTHO05D007553 1.0e-89 334.3 325 59.1
unitig_61.g26325 Utricularia gibba HOM05D006016 ORTHO05D007553 5.6e-88 328.6 292 61.3
Zm00001eb287380 Zea mays HOM05D006016 ORTHO05D007553 7.3e-88 328.2 250 68.4
BolSC55t61222H Brassica oleracea HOM05D006016 ORTHO05D007553 2.1e-87 326.6 270 65.2
Lj5g0023557 Lotus japonicus HOM05D006016 ORTHO05D007553 3.6e-87 325.9 278 65.5
Phvul.007G169400 Phaseolus vulgaris HOM05D006016 ORTHO05D007553 4.0e-86 322.4 285 62.5
AT2G48120 Arabidopsis thaliana HOM05D006016 ORTHO05D007553 2.6e-85 319.7 328 55.5
BNapus_Darmor_BZH_scaffold_188p00130 Brassica napus HOM05D006016 ORTHO05D007553 2.6e-85 319.7 236 69.5
BNapus_Darmor_BZH_scaffold_188p00120 Brassica napus HOM05D006016 ORTHO05D007553 3.4e-85 319.3 226 71.7
BcaC02g12797 Brassica carinata HOM05D006016 ORTHO05D007553 6.4e-84 315.1 292 61.0
Psat6g138080 Pisum sativum HOM05D006016 ORTHO05D007553 2.4e-83 313.2 228 71.5
Gohir.D08G079100 Gossypium hirsutum HOM05D006016 ORTHO05D007553 5.6e-80 302.0 325 54.2
Dinv32962 Davidia involucrata HOM05D006016 ORTHO05D007553 6.2e-79 298.5 186 79.6
Hma1.2p1_0628F.1_g191890 Hydrangea macrophylla HOM05D006016 ORTHO05D007553 3.2e-75 286.2 245 64.5
BcaC02g12566 Brassica carinata HOM05D006016 ORTHO05D007553 2.3e-73 280.0 293 57.0
vmacro14936 Vaccinium macrocarpon HOM05D006016 ORTHO05D007553 3.3e-72 276.2 329 53.2
SEGI_37912 Sequoiadendron giganteum HOM05D006016 ORTHO05D007553 3.4e-69 266.2 260 55.4
arahy.Tifrunner.gnm1.ann1.9IJ3BZ Arachis hypogaea HOM05D006016 ORTHO05D007553 4.4e-69 265.8 291 55.0
Actinidia21099 Actinidia chinensis HOM05D006016 ORTHO05D007553 1.6e-66 257.3 261 57.1
QL10p008835 Quercus lobata HOM05D006016 ORTHO05D007553 3.0e-65 253.1 181 71.3
BolSC55t61219H Brassica oleracea HOM05D006016 ORTHO05D007553 6.2e-63 245.4 199 65.3
SMO360G0019 Selaginella moellendorffii HOM05D006016 ORTHO05D007553 4.0e-62 242.7 253 50.2
Mapoly0059s0024 Marchantia polymorpha HOM05D006016 ORTHO05D007553 1.5e-61 240.7 256 53.5
Pp3c5_15510 Physcomitrium patens HOM05D006016 ORTHO05D007553 1.1e-59 234.6 252 52.4
BolSC55t61223H Brassica oleracea HOM05D006016 ORTHO05D007553 5.4e-59 232.3 209 60.3
Lj9C654T2 Lonicera japonica HOM05D006016 ORTHO05D007553 1.1e-46 191.4 183 55.7
AagrBONN_evm.TU.Sc2ySwM_228.5509 Anthoceros agrestis HOM05D006016 ORTHO05D007553 1.4e-46 191.0 173 56.6
Glyma.02G149402 Glycine max HOM05D006016 ORTHO05D007553 9.0e-46 188.3 148 68.2
BraA05t18995Z Brassica rapa HOM05D006016 ORTHO05D007553 9.6e-40 168.3 129 64.3
BNapus_Darmor_BZH_scaffold_188p00100 Brassica napus HOM05D006016 ORTHO05D007553 2.6e-37 160.2 126 63.5
BNapus_Darmor_BZH_scaffold_188p00090 Brassica napus HOM05D001484 ORTHO05D007553 5.0e-28 129.4 116 62.1
Actinidia24878 Actinidia chinensis HOM05D006016 ORTHO05D007553 8.5e-28 128.6 154 51.3
QL09p051040 Quercus lobata HOM05D006016 ORTHO05D007553 1.1e-27 128.3 119 58.8
Oeu001432.1 Olea europaea HOM05D006016 ORTHO05D007553 2.1e-26 124.0 99 62.6
CBR_g23747 Chara braunii HOM05D006016 ORTHO05D007553 3.0e-25 120.2 237 32.5
AUR62004907 Chenopodium quinoa HOM05D006016 ORTHO05D007553 6.5e-20 102.4 79 64.6
QL09p050526 Quercus lobata HOM05D006016 ORTHO05D337571 2.5e-19 100.5 85 58.8
BcaC08g43234 Brassica carinata HOM05D006016 ORTHO05D007553 1.3e-15 88.2 69 58.0
MBI04_g32261_MAGBIO Magnolia biondii HOM05D006016 ORTHO05D007553 2.0e-13 80.9 71 62.0
Dinv13370 Davidia involucrata HOM05D006016 ORTHO05D007553 1.1e-11 75.1 126 44.4
Dinv01676 Davidia involucrata HOM05D006016 ORTHO05D007553 4.2e-11 73.2 65 69.2
QL09p050966 Quercus lobata HOM05D001484 ORTHO05D001564 6.7e-09 65.9 34 76.5
Dinv16891 Davidia involucrata HOM05D006016 ORTHO05D007553 2.6e-08 63.9 65 61.5
BolC6t35694H Brassica oleracea HOM05D006016 ORTHO05D007553 1.1e-06 58.5 46 69.6


User provided reference genes

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