Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO135G0120 Papaver somniferum HOM05D005330 ORTHO05D006489 8.2e-205 716.8 366 100.0
PSO135G0922 Papaver somniferum HOM05D005330 ORTHO05D006489 1.9e-97 360.1 341 58.7
PSO135G0621 Papaver somniferum HOM05D005330 ORTHO05D006489 2.6e-81 306.6 381 50.7
PSO724G1321 Papaver somniferum HOM05D005330 ORTHO05D006489 1.6e-78 297.4 390 48.7
Cpa.g.sc25.125 Carica papaya HOM05D005330 ORTHO05D006489 6.1e-75 285.4 387 43.4
Rhsim08G0239400 Rhododendron simsii HOM05D005330 ORTHO05D006489 3.7e-72 276.2 335 45.4
GSVIVG01016752001 Vitis vinifera HOM05D005330 ORTHO05D006489 4.8e-72 275.8 372 43.0
TWI79G1442 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 8.2e-72 275.0 369 42.8
Thecc.06G120800 Theobroma cacao HOM05D005330 ORTHO05D006489 1.1e-71 274.6 367 43.9
Nn6g34611 Nelumbo nucifera HOM05D005330 ORTHO05D006489 1.4e-71 274.2 372 43.5
Dinv20432 Davidia involucrata HOM05D005330 ORTHO05D006489 7.0e-71 271.9 369 42.0
Phvul.010G129300 Phaseolus vulgaris HOM05D005330 ORTHO05D006489 2.7e-70 270.0 368 42.4
Glyma.16G008300 Glycine max HOM05D005330 ORTHO05D006489 7.7e-70 268.5 366 41.5
Eucgr.F04419 Eucalyptus grandis HOM05D005330 ORTHO05D006489 1.7e-69 267.3 375 42.7
Psat0s741g0240 Pisum sativum HOM05D005330 ORTHO05D006489 1.7e-69 267.3 370 41.1
TWI31G1192 Tripterygium wilfordii HOM05D005330 ORTHO05D006489 2.2e-69 266.9 365 42.7
vmacro15037 Vaccinium macrocarpon HOM05D005330 ORTHO05D006489 2.2e-69 266.9 371 41.5
PGR119G1300 Punica granatum HOM05D005330 ORTHO05D006489 3.8e-69 266.2 376 41.8
AUR62001479 Chenopodium quinoa HOM05D005330 ORTHO05D006489 6.5e-69 265.4 335 43.6
CiPaw.01G218300 Carya illinoinensis HOM05D005330 ORTHO05D006489 8.5e-69 265.0 384 41.4
EL10Ac7g16412 Beta vulgaris HOM05D005330 ORTHO05D006489 4.2e-68 262.7 372 40.6
Gohir.D10G055300 Gossypium hirsutum HOM05D005330 ORTHO05D006489 7.2e-68 261.9 366 40.7
Gorai.011G059000 Gossypium raimondii HOM05D005330 ORTHO05D006489 7.2e-68 261.9 366 40.7
VMungo0331G1542 Vigna mungo HOM05D005330 ORTHO05D006489 1.2e-67 261.2 369 40.9
Gohir.A10G053500 Gossypium hirsutum HOM05D005330 ORTHO05D006489 8.0e-67 258.5 366 41.0
Manes.11G019800 Manihot esculenta HOM05D005330 ORTHO05D006489 8.0e-67 258.5 376 42.3
QL05p004250 Quercus lobata HOM05D005330 ORTHO05D006489 1.8e-66 257.3 407 39.8
Glyma.18G149800 Glycine max HOM05D005330 ORTHO05D006489 5.2e-66 255.8 370 41.1
Actinidia32189 Actinidia chinensis HOM05D005330 ORTHO05D006489 8.8e-66 255.0 364 39.6
Cfa003530 Carpinus fangiana HOM05D005330 ORTHO05D006489 8.8e-66 255.0 383 40.7
Lalb_Chr04g0263541 Lupinus albus HOM05D005330 ORTHO05D006489 8.8e-66 255.0 367 40.6
Atru.chr1.3994 Acer truncatum HOM05D005330 ORTHO05D006489 2.6e-65 253.4 373 40.8
Sed0005660 Sechium edule HOM05D005330 ORTHO05D006489 2.6e-65 253.4 372 42.5
ClCG09G000970 Citrullus lanatus HOM05D005330 ORTHO05D006489 4.4e-65 252.7 377 39.8
Ah.08g216810 Amaranthus hybridus HOM05D005330 ORTHO05D006489 5.7e-65 252.3 367 38.4
Hund05737 Selenicereus undatus HOM05D005330 ORTHO05D006489 5.7e-65 252.3 360 40.0
Lj3g0015373 Lotus japonicus HOM05D005330 ORTHO05D006489 9.8e-65 251.5 368 39.7
Nitab4.5_0000189g0150 Nicotiana tabacum HOM05D005330 ORTHO05D006489 1.7e-64 250.8 369 39.6
SGA_v2.0_scaffold122G33335 Striga asiatica HOM05D005330 ORTHO05D006489 1.7e-64 250.8 390 41.3
Nitab4.5_0001199g0030 Nicotiana tabacum HOM05D005330 ORTHO05D006489 2.2e-64 250.4 369 39.3
Cc04_g01320 Coffea canephora HOM05D005330 ORTHO05D006489 3.7e-64 249.6 375 39.7
Lsat_1_v5_gn_5_136241 Lactuca sativa HOM05D005330 ORTHO05D006489 4.8e-64 249.2 374 39.3
Sabra03G0038500 Salix brachista HOM05D005330 ORTHO05D006489 4.8e-64 249.2 369 39.3
Sed0026793 Sechium edule HOM05D005330 ORTHO05D006489 4.8e-64 249.2 376 41.5
Oeu015485.2 Olea europaea HOM05D005330 ORTHO05D006489 1.4e-63 247.7 383 39.7
Medtr8g020850 Medicago truncatula HOM05D005330 ORTHO05D006489 1.8e-63 247.3 366 39.6
Ca_23387_v3 Cicer arietinum L. HOM05D005330 ORTHO05D006489 3.1e-63 246.5 368 38.9
Lj5A36G79 Lonicera japonica HOM05D005330 ORTHO05D006489 3.1e-63 246.5 383 38.9
Potri.003G065500 Populus trichocarpa HOM05D005330 ORTHO05D006489 4.1e-63 246.1 369 39.3
Sc10g0007910 Simmondsia chinensis HOM05D005330 ORTHO05D006489 5.4e-63 245.7 368 41.6
DCAR_022693 Daucus carota HOM05D005330 ORTHO05D006489 9.1e-63 245.0 368 39.4
Hma1.2p1_0686F.1_g203410 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 2.7e-62 243.4 366 41.3
Hund18689 Selenicereus undatus HOM05D005330 ORTHO05D006489 2.7e-62 243.4 364 39.3
Solyc12g049330.2 Solanum lycopersicum HOM05D005330 ORTHO05D006489 2.7e-62 243.4 368 39.1
Potri.001G168700 Populus trichocarpa HOM05D005330 ORTHO05D006489 3.5e-62 243.0 369 39.6
PGSC0003DMG400014100 Solanum tuberosum HOM05D005330 ORTHO05D006489 3.5e-62 243.0 374 39.0
Sopen12g023810 Solanum pennellii HOM05D005330 ORTHO05D006489 4.5e-62 242.7 368 38.9
PSO724G1224 Papaver somniferum HOM05D005330 ORTHO05D006489 7.7e-62 241.9 219 60.3
Ciclev10025803m.g Citrus clementina HOM05D005330 ORTHO05D006489 1.0e-61 241.5 373 38.1
Prupe.3G040200 Prunus persica HOM05D005330 ORTHO05D006489 1.5e-60 237.7 369 39.8
Peaxi162Scf00177g00417 Petunia axillaris HOM05D005330 ORTHO05D006489 1.9e-60 237.3 370 39.2
Atru.chr1.3993 Acer truncatum HOM05D005330 ORTHO05D006489 1.6e-59 234.2 373 39.4
SalBow6G0331 Salvia bowleyana HOM05D005330 ORTHO05D006489 1.6e-59 234.2 381 37.0
MD09G1182600 Malus domestica HOM05D005330 ORTHO05D006489 2.1e-59 233.8 365 39.7
SalBow6G0719 Salvia bowleyana HOM05D005330 ORTHO05D006489 2.1e-59 233.8 377 37.1
Aqoxy2G00145 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 2.8e-59 233.4 402 36.3
AUR62009886 Chenopodium quinoa HOM05D005330 ORTHO05D006489 4.7e-59 232.6 364 38.5
HanXRQChr12g0360301 Helianthus annuus HOM05D005330 ORTHO05D006489 1.8e-58 230.7 372 37.9
HanXRQChr12g0360351 Helianthus annuus HOM05D005330 ORTHO05D006489 1.8e-58 230.7 372 37.9
BcaB04g17020 Brassica carinata HOM05D005330 ORTHO05D006489 2.3e-58 230.3 384 36.7
arahy.Tifrunner.gnm1.ann1.K577WU Arachis hypogaea HOM05D005330 ORTHO05D006489 3.0e-58 229.9 275 45.5
arahy.Tifrunner.gnm1.ann1.RX87J0 Arachis hypogaea HOM05D005330 ORTHO05D006489 5.2e-58 229.2 275 45.1
BraA08t32169Z Brassica rapa HOM05D005330 ORTHO05D006489 1.5e-57 227.6 384 35.7
A06p00510 Brassica napus HOM05D005330 ORTHO05D006489 2.6e-57 226.9 387 37.0
Haze_16035 Corylus avellana HOM05D005330 ORTHO05D006489 2.6e-57 226.9 443 35.2
A08p01180 Brassica napus HOM05D005330 ORTHO05D006489 4.4e-57 226.1 384 35.4
BraA06t23266Z Brassica rapa HOM05D005330 ORTHO05D006489 4.4e-57 226.1 391 37.1
ATR0598G333 Amborella trichopoda HOM05D005330 ORTHO05D006489 9.8e-57 224.9 360 39.2
C03p92030 Brassica napus HOM05D005330 ORTHO05D006489 1.3e-56 224.6 384 35.2
Hma1.2p1_0291F.1_g115070 Hydrangea macrophylla HOM05D005330 ORTHO05D006489 1.3e-56 224.6 360 38.6
BcaC08g43595 Brassica carinata HOM05D005330 ORTHO05D006489 3.7e-56 223.0 388 36.3
C06p09930 Brassica napus HOM05D005330 ORTHO05D006489 3.7e-56 223.0 388 36.3
BolC6t36066H Brassica oleracea HOM05D005330 ORTHO05D006489 3.7e-56 223.0 388 36.3
MELO3C024354.2 Cucumis melo HOM05D005330 ORTHO05D006489 8.3e-56 221.9 275 45.1
BcaC01g01438 Brassica carinata HOM05D005330 ORTHO05D006489 1.1e-55 221.5 384 34.6
BolC3t21521H Brassica oleracea HOM05D005330 ORTHO05D006489 1.1e-55 221.5 384 34.6
COL.COLO4_30752 Corchorus olitorius HOM05D005330 ORTHO05D006489 1.8e-55 220.7 337 40.7
DCAR_016124 Daucus carota HOM05D005330 ORTHO05D006489 3.1e-55 219.9 341 38.7
RcHm_v2.0_Chr2g0145651 Rosa chinensis HOM05D005330 ORTHO05D006489 5.4e-55 219.2 385 35.8
Sp1g40600 Schrenkiella parvula HOM05D005330 ORTHO05D006489 9.2e-55 218.4 387 36.2
SGA_v2.0_scaffold71G23853 Striga asiatica HOM05D005330 ORTHO05D006489 9.2e-55 218.4 408 36.3
BcaB07g33256 Brassica carinata HOM05D005330 ORTHO05D006489 1.6e-54 217.6 393 36.9
CsaV3_7G034470 Cucumis sativus L. HOM05D005330 ORTHO05D006489 3.5e-54 216.5 272 45.2
TPR.G36682 Trifolium pratense HOM05D005330 ORTHO05D006489 5.9e-54 215.7 323 36.5
CARHR044500 Cardamine hirsuta HOM05D005330 ORTHO05D006489 1.0e-53 214.9 389 35.7
SEGI_21309 Sequoiadendron giganteum HOM05D005330 ORTHO05D006489 1.0e-53 214.9 374 37.7
MD09G1182800 Malus domestica HOM05D005330 ORTHO05D006489 1.7e-53 214.2 364 38.2
AL1G62870 Arabidopsis lyrata HOM05D005330 ORTHO05D006489 2.3e-53 213.8 383 37.1
ECA234G4612 Erigeron canadensis HOM05D005330 ORTHO05D006489 2.9e-53 213.4 369 35.0
Carub.0001s4339 Capsella rubella HOM05D005330 ORTHO05D006489 5.0e-53 212.6 388 36.9
Thhalv10011564m.g Eutrema salsugineum HOM05D005330 ORTHO05D006489 1.5e-52 211.1 390 34.9
TAR624G1001 Trochodendron aralioides HOM05D005330 ORTHO05D006489 2.5e-52 210.3 233 47.6
AT1G54150 Arabidopsis thaliana HOM05D005330 ORTHO05D006489 4.3e-52 209.5 388 36.6
Migut.I01076 Erythranthe guttata HOM05D005330 ORTHO05D006489 5.6e-52 209.1 384 35.4
HPP92_013292 Vanilla planifolia HOM05D005330 ORTHO05D006489 1.6e-51 207.6 360 33.9
HanXRQChr12g0360331 Helianthus annuus HOM05D005330 ORTHO05D006489 6.1e-51 205.7 364 35.7
THA.LOC104810366 Tarenaya hassleriana HOM05D005330 ORTHO05D006489 6.1e-51 205.7 387 35.4
Aa31LG10G1260 Aethionema arabicum HOM05D005330 ORTHO05D006489 2.3e-50 203.8 369 35.8
CAN.G1455.4 Capsicum annuum HOM05D005330 ORTHO05D006489 1.2e-49 201.4 229 45.4
FAN05G5341 Fragaria x ananassa HOM05D005330 ORTHO05D006489 1.3e-48 198.0 367 35.1
FvH4_6g34790 Fragaria vesca HOM05D005330 ORTHO05D006489 1.7e-48 197.6 367 35.1
Glyma.03G080300 Glycine max HOM05D005330 ORTHO05D006489 2.4e-47 193.7 368 35.9
Duzib160G0528 Durio zibethinus HOM05D005330 ORTHO05D006489 4.1e-47 193.0 366 35.2
MD09G1182700 Malus domestica HOM05D005330 ORTHO05D006489 1.2e-46 191.4 369 35.8
TAR624G0147 Trochodendron aralioides HOM05D005330 ORTHO05D006489 5.0e-45 186.0 233 44.6
SMO118G0169 Selaginella moellendorffii HOM05D005330 ORTHO05D006489 1.6e-43 181.0 372 31.5
CDE05G1829 Ceratophyllum demersum HOM05D005330 ORTHO05D006489 3.6e-43 179.9 302 38.4
MD02G1089500 Malus domestica HOM05D005330 ORTHO05D006489 5.8e-41 172.6 368 33.7
AagrBONN_evm.TU.Sc2ySwM_228.1646 Anthoceros agrestis HOM05D005330 ORTHO05D006489 2.0e-38 164.1 396 31.3
Mapoly0002s0144 Marchantia polymorpha HOM05D005330 ORTHO05D006489 2.3e-37 160.6 413 31.7
Pp3c13_6970 Physcomitrium patens HOM05D005330 ORTHO05D006489 1.9e-36 157.5 240 39.2
Os03g0177300 Oryza sativa ssp. japonica HOM05D005330 ORTHO05D006489 9.5e-36 155.2 358 33.0
Pp3c16_12380 Physcomitrium patens HOM05D005330 ORTHO05D006489 2.1e-35 154.1 369 30.4
Zm00001eb401910 Zea mays HOM05D005330 ORTHO05D006489 8.3e-32 142.1 224 36.2
CAN.G1080.1 Capsicum annuum HOM05D005330 ORTHO05D006489 9.2e-31 138.7 229 37.6
CSS0046024 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 1.0e-29 135.2 102 62.7
Lsat_1_v5_gn_5_136301 Lactuca sativa HOM05D005330 ORTHO05D006489 1.9e-28 131.0 235 35.7
Aqoxy3G00178 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.6e-27 127.9 236 33.1
Aqoxy3G00203 Aquilegia oxysepala HOM05D005330 ORTHO05D006489 1.9e-23 114.4 301 30.9
Dinv20433 Davidia involucrata HOM05D005330 ORTHO05D006489 2.3e-21 107.5 267 33.7
CBR_g17139 Chara braunii HOM05D005330 ORTHO05D006489 1.1e-20 105.1 246 30.9
Actinidia21790 Actinidia chinensis HOM05D005330 ORTHO05D006489 1.5e-17 94.7 134 36.6
CSS0027574 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 3.6e-11 73.6 143 32.2
Actinidia21791 Actinidia chinensis HOM05D005330 ORTHO05D006489 4.8e-11 73.2 102 40.2
CSS0036813 Camellia sinensis var. sinensis HOM05D005330 ORTHO05D006489 3.4e-09 67.0 109 40.4


User provided reference genes

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