Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G4822 Papaver somniferum HOM05D006873 ORTHO05D008668 2.5e-276 954.9 514 100.0
PSO832G2329 Papaver somniferum HOM05D006873 ORTHO05D008668 9.9e-257 889.8 514 93.6
Nn3g16974 Nelumbo nucifera HOM05D006873 ORTHO05D008668 1.2e-71 275.0 526 40.5
Aqoxy3G03077 Aquilegia oxysepala HOM05D006873 ORTHO05D008668 1.0e-64 251.9 529 36.9
CSS0023446 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 9.8e-63 245.4 423 41.4
CSS0006883 Camellia sinensis var. sinensis HOM05D006873 ORTHO05D008668 4.9e-62 243.0 420 41.0
TAR622G0254 Trochodendron aralioides HOM05D006873 ORTHO05D008668 1.1e-61 241.9 519 36.8
DCAR_026551 Daucus carota HOM05D006873 ORTHO05D008668 5.4e-61 239.6 468 38.9
Ciclev10031560m.g Citrus clementina HOM05D006873 ORTHO05D008668 3.5e-60 236.9 418 39.7
CiPaw.06G074700 Carya illinoinensis HOM05D006873 ORTHO05D008668 3.3e-58 230.3 545 34.5
THA.LOC104823082 Tarenaya hassleriana HOM05D006873 ORTHO05D008668 4.7e-57 226.5 453 37.3
Atru.chr11.1966 Acer truncatum HOM05D006873 ORTHO05D008668 2.3e-56 224.2 526 35.9
Potri.008G146700 Populus trichocarpa HOM05D006873 ORTHO05D008668 2.3e-56 224.2 436 39.0
Haze_12141 Corylus avellana HOM05D006873 ORTHO05D008668 5.2e-56 223.0 447 35.8
PGR119G2095 Punica granatum HOM05D006873 ORTHO05D008668 7.5e-55 219.2 474 35.9
MSTRG.7876 Avicennia marina HOM05D006873 ORTHO05D008668 2.2e-54 217.6 465 36.3
COL.COLO4_37899 Corchorus olitorius HOM05D006873 ORTHO05D008668 2.2e-54 217.6 308 45.1
Manes.05G090700 Manihot esculenta HOM05D006873 ORTHO05D008668 2.9e-54 217.2 415 37.6
GSVIVG01020168001 Vitis vinifera HOM05D006873 ORTHO05D008668 4.9e-54 216.5 215 54.4
Cfa009104 Carpinus fangiana HOM05D006873 ORTHO05D008668 1.1e-53 215.3 445 36.2
Cpa.g.sc5.353 Carica papaya HOM05D006873 ORTHO05D008668 1.4e-53 214.9 517 34.4
FAN07G2203 Fragaria x ananassa HOM05D006873 ORTHO05D008668 3.2e-53 213.8 493 34.9
Gohir.D08G144400 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.2e-52 211.8 244 48.8
MD16G1087500 Malus domestica HOM05D006873 ORTHO05D008668 1.2e-52 211.8 434 37.6
Gorai.004G149100 Gossypium raimondii HOM05D006873 ORTHO05D008668 2.1e-52 211.1 268 47.0
Gohir.A08G123000 Gossypium hirsutum HOM05D006873 ORTHO05D008668 1.0e-51 208.8 282 44.7
TWI18G0196 Tripterygium wilfordii HOM05D006873 ORTHO05D008668 1.0e-51 208.8 507 36.1
QL03p062447 Quercus lobata HOM05D006873 ORTHO05D008668 1.7e-51 208.0 179 58.7
Prupe.1G259500 Prunus persica HOM05D006873 ORTHO05D008668 8.6e-51 205.7 298 42.6
Actinidia15007 Actinidia chinensis HOM05D006873 ORTHO05D008668 1.1e-50 205.3 516 34.3
FAN22G1812 Fragaria x ananassa HOM05D006873 ORTHO05D008668 3.3e-50 203.8 563 33.7
Thecc.02G242900 Theobroma cacao HOM05D006873 ORTHO05D008668 4.3e-50 203.4 529 33.1
Lj2g0015184 Lotus japonicus HOM05D006873 ORTHO05D008668 5.6e-50 203.0 418 37.1
FAN17G1454 Fragaria x ananassa HOM05D006873 ORTHO05D008668 9.5e-50 202.2 564 34.2
Eucgr.B02558 Eucalyptus grandis HOM05D006873 ORTHO05D008668 1.6e-49 201.4 417 38.4
SGA_v2.0_scaffold166G38344 Striga asiatica HOM05D006873 ORTHO05D008668 1.6e-49 201.4 432 34.5
HanXRQChr08g0209031 Helianthus annuus HOM05D006873 ORTHO05D008668 4.7e-49 199.9 408 37.0
ATR1149G030 Amborella trichopoda HOM05D006873 ORTHO05D008668 6.2e-49 199.5 179 55.3
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 8.1e-49 199.1 443 35.2
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 1.8e-48 198.0 406 37.2
Lsat_1_v5_gn_8_160241 Lactuca sativa HOM05D006873 ORTHO05D008668 1.8e-48 198.0 275 45.8
SalBow2G2439 Salvia bowleyana HOM05D006873 ORTHO05D008668 1.8e-48 198.0 464 32.5
Phvul.002G074900 Phaseolus vulgaris HOM05D006873 ORTHO05D008668 3.1e-48 197.2 531 32.8
arahy.Tifrunner.gnm1.ann1.MXA56B Arachis hypogaea HOM05D006873 ORTHO05D008668 5.2e-48 196.4 415 36.9
Nitab4.5_0009368g0020 Nicotiana tabacum HOM05D006873 ORTHO05D008668 6.8e-48 196.1 523 32.5
FvH4_4g34980 Fragaria vesca HOM05D006873 ORTHO05D008668 8.9e-48 195.7 557 32.7
RcHm_v2.0_Chr4g0444501 Rosa chinensis HOM05D006873 ORTHO05D008668 1.5e-47 194.9 541 33.1
Cc11_g14280 Coffea canephora HOM05D006873 ORTHO05D008668 2.0e-47 194.5 410 36.3
Solyc05g006070.4 Solanum lycopersicum HOM05D006873 ORTHO05D008668 2.0e-47 194.5 409 34.0
Nitab4.5_0000257g0240 Nicotiana tabacum HOM05D006873 ORTHO05D008668 3.4e-47 193.7 415 34.9
Aa31LG4G10700 Aethionema arabicum HOM05D006873 ORTHO05D008668 4.4e-47 193.4 446 35.4
Glyma.02G030100 Glycine max HOM05D006873 ORTHO05D008668 5.8e-47 193.0 416 36.1
SalBow2G2215 Salvia bowleyana HOM05D006873 ORTHO05D008668 5.8e-47 193.0 464 33.0
PGSC0003DMG400015575 Solanum tuberosum HOM05D006873 ORTHO05D008668 9.9e-47 192.2 428 33.2
Sopen05g002090 Solanum pennellii HOM05D006873 ORTHO05D008668 1.3e-46 191.8 410 33.9
Rhsim12G0124200 Rhododendron simsii HOM05D006873 ORTHO05D008668 1.7e-46 191.4 445 35.7
vmacro16278 Vaccinium macrocarpon HOM05D006873 ORTHO05D008668 1.7e-46 191.4 443 35.7
Sc11g0001350 Simmondsia chinensis HOM05D006873 ORTHO05D008668 3.7e-46 190.3 412 35.2
Migut.L01442 Erythranthe guttata HOM05D006873 ORTHO05D008668 6.4e-46 189.5 539 31.0
EL10Ac6g13256 Beta vulgaris HOM05D006873 ORTHO05D008668 1.4e-45 188.3 246 43.9
Ca_04627_v3 Cicer arietinum L. HOM05D006873 ORTHO05D008668 1.9e-45 188.0 195 52.3
Lalb_Chr05g0217211 Lupinus albus HOM05D006873 ORTHO05D008668 2.4e-45 187.6 420 35.0
Sabra08G0111700 Salix brachista HOM05D006873 ORTHO05D008668 2.4e-45 187.6 413 36.6
Carub.0002s1690 Capsella rubella HOM05D006873 ORTHO05D008668 4.1e-45 186.8 424 34.2
Glyma.01G035700 Glycine max HOM05D006873 ORTHO05D008668 4.1e-45 186.8 413 35.8
Sp5g25330 Schrenkiella parvula HOM05D006873 ORTHO05D008668 7.1e-45 186.0 428 34.3
unitig_26.g10334 Utricularia gibba HOM05D006873 ORTHO05D008668 7.1e-45 186.0 159 57.9
CANSAT01G2194 Cannabis sativa HOM05D006873 ORTHO05D008668 9.2e-45 185.7 506 32.4
Duzib248G0774 Durio zibethinus HOM05D006873 ORTHO05D008668 9.2e-45 185.7 511 33.9
ClCG09G020710 Citrullus lanatus HOM05D006873 ORTHO05D008668 1.2e-44 185.3 493 32.9
arahy.Tifrunner.gnm1.ann1.N2BTYN Arachis hypogaea HOM05D006873 ORTHO05D008668 2.7e-44 184.1 434 35.5
CARHR063320 Cardamine hirsuta HOM05D006873 ORTHO05D008668 3.5e-44 183.7 413 33.9
MELO3C002912.2 Cucumis melo HOM05D006873 ORTHO05D008668 3.5e-44 183.7 482 34.0
AT1G70200 Arabidopsis thaliana HOM05D006873 ORTHO05D008668 4.6e-44 183.3 428 33.6
arahy.Tifrunner.gnm1.ann1.8WMT1Z Arachis hypogaea HOM05D006873 ORTHO05D008668 1.7e-43 181.4 430 35.8
arahy.Tifrunner.gnm1.ann1.RPT3RX Arachis hypogaea HOM05D006873 ORTHO05D009096 1.7e-43 181.4 428 34.8
VMungo1215G0960 Vigna mungo HOM05D006873 ORTHO05D008668 3.9e-43 180.3 504 32.3
Thhalv10018395m.g Eutrema salsugineum HOM05D006873 ORTHO05D008668 5.1e-43 179.9 414 34.1
TPR.G13500 Trifolium pratense HOM05D006873 ORTHO05D008668 1.1e-42 178.7 416 35.1
Peaxi162Scf00421g00062 Petunia axillaris HOM05D006873 ORTHO05D008668 1.9e-42 177.9 369 37.4
Medtr5g035330 Medicago truncatula HOM05D006873 ORTHO05D008668 5.6e-42 176.4 526 30.6
AL2G29500 Arabidopsis lyrata HOM05D006873 ORTHO05D008668 9.6e-42 175.6 510 30.8
BraA07t30751Z Brassica rapa HOM05D006873 ORTHO05D008668 1.2e-41 175.3 410 32.7
Sed0022830 Sechium edule HOM05D006873 ORTHO05D008668 2.1e-41 174.5 444 32.9
A07p31180 Brassica napus HOM05D006873 ORTHO05D008668 2.8e-41 174.1 410 32.7
Hund25317 Selenicereus undatus HOM05D006873 ORTHO05D008668 1.8e-40 171.4 505 32.7
HPP92_005898 Vanilla planifolia HOM05D006873 ORTHO05D008668 1.8e-40 171.4 189 46.0
Psat2g111440 Pisum sativum HOM05D006873 ORTHO05D008668 1.7e-38 164.9 227 43.2
BcaB03g15534 Brassica carinata HOM05D006873 ORTHO05D008668 2.2e-38 164.5 414 31.6
BcaC08g45836 Brassica carinata HOM05D006873 ORTHO05D008668 1.4e-37 161.8 419 31.5
BolC6t38744H Brassica oleracea HOM05D006873 ORTHO05D008668 1.9e-37 161.4 412 30.8
AUR62020959 Chenopodium quinoa HOM05D006873 ORTHO05D008668 7.1e-37 159.5 411 31.9
Dinv31000 Davidia involucrata HOM05D006873 ORTHO05D008668 4.6e-36 156.8 404 33.2
Dinv31103 Davidia involucrata HOM05D006873 ORTHO05D008668 4.6e-36 156.8 404 33.2
C06p36230 Brassica napus HOM05D006873 ORTHO05D008668 6.0e-36 156.4 412 31.1
Ah.04g149970 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.3e-33 148.7 240 37.9
SEGI_33585 Sequoiadendron giganteum HOM05D006873 ORTHO05D008668 1.2e-31 142.1 455 32.3
CDE04G1917 Ceratophyllum demersum HOM05D000231 ORTHO05D008668 2.6e-31 141.0 384 32.8
Zm00001eb234150 Zea mays HOM05D006873 ORTHO05D008668 4.4e-31 140.2 213 41.8
MBI15_g12637_MAGBIO Magnolia biondii HOM05D006873 ORTHO05D008668 4.9e-30 136.7 342 31.9
Mapoly0001s0497 Marchantia polymorpha HOM05D006873 ORTHO05D008668 4.2e-29 133.7 307 30.9
Os02g0326200 Oryza sativa ssp. japonica HOM05D006873 ORTHO05D008668 5.4e-29 133.3 159 45.3
CBR_g81555 Chara braunii HOM05D006873 ORTHO05D000353 7.1e-29 132.9 194 39.7
CsaV3_5G025700 Cucumis sativus L. HOM05D006873 ORTHO05D008668 1.3e-27 128.6 346 32.4
Oeu001659.1 Olea europaea HOM05D006873 ORTHO05D008668 1.5e-26 125.2 340 30.6
AagrBONN_evm.TU.Sc2ySwM_362.2365 Anthoceros agrestis HOM05D006873 ORTHO05D008668 9.6e-26 122.5 305 32.8
Duzib251G0321 Durio zibethinus HOM05D006873 ORTHO05D008668 4.0e-24 117.1 223 36.3
SMO146G0062 Selaginella moellendorffii HOM05D006873 ORTHO05D008668 5.8e-23 113.2 243 30.5
Pp3c1_41900 Physcomitrium patens HOM05D006873 ORTHO05D008668 2.7e-20 104.4 442 26.5
Oeu001660.1 Olea europaea HOM05D006873 ORTHO05D008668 7.4e-18 96.3 78 64.1
AUR62018459 Chenopodium quinoa HOM05D000676 ORTHO05D001458 1.7e-14 85.1 167 37.1
CsaV3_5G025690 Cucumis sativus L. HOM05D006873 ORTHO05D008668 4.2e-13 80.5 108 44.4
CsaV3_5G025680 Cucumis sativus L. HOM05D006873 ORTHO05D008668 3.5e-12 77.4 135 40.0
Ah.13g077500 Amaranthus hybridus HOM05D006873 ORTHO05D008668 1.1e-10 72.4 123 37.4


User provided reference genes

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