Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO063G3522 Papaver somniferum HOM05D005206 ORTHO05D006219 7.3e-311 1069.7 534 100.0
PSO832G4147 Papaver somniferum HOM05D005206 ORTHO05D006219 1.9e-290 1001.9 539 94.8
Aqoxy3G03082 Aquilegia oxysepala HOM05D005206 ORTHO05D006219 2.1e-217 759.2 554 69.7
TAR371G0117 Trochodendron aralioides HOM05D005206 ORTHO05D006219 9.8e-215 750.4 532 72.0
QL03p062489 Quercus lobata HOM05D005206 ORTHO05D006219 1.4e-205 719.9 529 69.0
GSVIVG01020174001 Vitis vinifera HOM05D005206 ORTHO05D006219 2.4e-205 719.2 532 68.4
Potri.010G094800 Populus trichocarpa HOM05D005206 ORTHO05D006219 4.1e-205 718.4 546 67.8
Atru.chr11.1960 Acer truncatum HOM05D005206 ORTHO05D006219 2.0e-204 716.1 523 69.8
Ciclev10031184m.g Citrus clementina HOM05D005206 ORTHO05D006219 5.9e-204 714.5 556 67.6
Nn4g22885 Nelumbo nucifera HOM05D005206 ORTHO05D006219 1.0e-203 713.8 543 67.4
Hma1.2p1_1049F.1_g251730 Hydrangea macrophylla HOM05D005206 ORTHO05D006219 2.3e-203 712.6 542 68.1
Dinv30996 Davidia involucrata HOM05D005206 ORTHO05D006219 2.5e-202 709.1 531 68.7
Thhalv10009477m.g Eutrema salsugineum HOM05D005206 ORTHO05D006219 3.3e-202 708.8 521 68.7
CSS0048376 Camellia sinensis var. sinensis HOM05D005206 ORTHO05D006219 9.5e-202 707.2 531 68.4
arahy.Tifrunner.gnm1.ann1.05N2IU Arachis hypogaea HOM05D005206 ORTHO05D006219 1.2e-201 706.8 527 66.6
Eucgr.B02561 Eucalyptus grandis HOM05D005206 ORTHO05D006219 1.2e-201 706.8 547 66.9
CsaV3_5G031880 Cucumis sativus L. HOM05D005206 ORTHO05D006219 1.8e-200 703.0 536 66.4
Rhsim12G0124400 Rhododendron simsii HOM05D005206 ORTHO05D006219 3.0e-200 702.2 558 67.0
Sp1g09150 Schrenkiella parvula HOM05D005206 ORTHO05D006219 4.0e-200 701.8 523 69.0
Lj2g0017178 Lotus japonicus HOM05D005206 ORTHO05D006219 8.9e-200 700.7 524 67.2
Lalb_Chr09g0326511 Lupinus albus HOM05D005206 ORTHO05D006219 8.9e-200 700.7 521 66.6
Manes.01G196700 Manihot esculenta HOM05D005206 ORTHO05D006219 1.2e-199 700.3 551 64.2
TWI36G1721 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 2.6e-199 699.1 524 68.9
Medtr7g039450 Medicago truncatula HOM05D005206 ORTHO05D006219 1.3e-198 696.8 524 66.8
BraA08t35305Z Brassica rapa HOM05D005206 ORTHO05D006219 1.7e-198 696.4 516 68.8
BcaC07g38608 Brassica carinata HOM05D005206 ORTHO05D006219 2.2e-198 696.0 515 68.5
CARHR010660 Cardamine hirsuta HOM05D005206 ORTHO05D006219 2.2e-198 696.0 514 69.3
Nitab4.5_0000257g0230 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.9e-198 695.7 528 68.4
THA.LOC104816736 Tarenaya hassleriana HOM05D005206 ORTHO05D006219 3.7e-198 695.3 530 67.4
CANSAT56G0905 Cannabis sativa HOM05D005206 ORTHO05D006219 4.9e-198 694.9 510 68.4
Sabra10G0067100 Salix brachista HOM05D005206 ORTHO05D006219 4.9e-198 694.9 575 63.1
Medtr5g040170 Medicago truncatula HOM05D005206 ORTHO05D006219 1.4e-197 693.3 524 66.4
Lj3A1048T22 Lonicera japonica HOM05D005206 ORTHO05D006219 2.4e-197 692.6 520 68.1
MBI15_g34233_MAGBIO Magnolia biondii HOM05D005206 ORTHO05D006219 2.4e-197 692.6 607 60.8
Carub.0001s0995 Capsella rubella HOM05D005206 ORTHO05D006219 3.2e-197 692.2 521 67.2
BolC8t49011H Brassica oleracea HOM05D005206 ORTHO05D006219 4.1e-197 691.8 516 68.0
BcaC07g38570 Brassica carinata HOM05D005206 ORTHO05D006219 5.4e-197 691.4 516 68.0
C08p13780 Brassica napus HOM05D005206 ORTHO05D006219 5.4e-197 691.4 516 68.0
RcHm_v2.0_Chr4g0444551 Rosa chinensis HOM05D005206 ORTHO05D006219 5.4e-197 691.4 534 66.9
Sed0001006 Sechium edule HOM05D005206 ORTHO05D006219 7.0e-197 691.0 526 66.5
Aa31LG1G4440 Aethionema arabicum HOM05D005206 ORTHO05D006219 9.2e-197 690.6 527 66.6
ATR1149G100 Amborella trichopoda HOM05D005206 ORTHO05D006219 1.6e-196 689.9 546 64.1
Glyma.02G065600 Glycine max HOM05D005206 ORTHO05D006219 3.5e-196 688.7 528 65.5
FvH4_4g35030 Fragaria vesca HOM05D005206 ORTHO05D006219 4.6e-196 688.3 534 66.5
RcHm_v2.0_Chr4g0444541 Rosa chinensis HOM05D005206 ORTHO05D006219 4.6e-196 688.3 505 68.7
arahy.Tifrunner.gnm1.ann1.U6W7RM Arachis hypogaea HOM05D005206 ORTHO05D006219 6.0e-196 688.0 555 63.1
Gorai.002G164200 Gossypium raimondii HOM05D005206 ORTHO05D006219 7.8e-196 687.6 550 65.1
C08p13760 Brassica napus HOM05D005206 ORTHO05D006219 1.0e-195 687.2 521 68.9
Phvul.004G071000 Phaseolus vulgaris HOM05D005206 ORTHO05D006219 3.0e-195 685.6 516 65.3
Ah.03g132350 Amaranthus hybridus HOM05D005206 ORTHO05D006219 1.5e-194 683.3 551 63.9
Gohir.A01G141200 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.5e-194 683.3 550 64.9
A08p33920 Brassica napus HOM05D005206 ORTHO05D006219 1.9e-194 682.9 540 65.7
Dinv31107 Davidia involucrata HOM05D005206 ORTHO05D006219 1.9e-194 682.9 511 69.1
vmacro16280 Vaccinium macrocarpon HOM05D005206 ORTHO05D006219 4.3e-194 681.8 551 65.0
Thecc.02G242400 Theobroma cacao HOM05D005206 ORTHO05D006219 5.6e-194 681.4 524 67.2
Lsat_1_v5_gn_9_83200 Lactuca sativa HOM05D005206 ORTHO05D006219 7.3e-194 681.0 506 68.4
EL10Ac8g20565 Beta vulgaris HOM05D005206 ORTHO05D006219 2.8e-193 679.1 552 64.7
FvH4_4g35010 Fragaria vesca HOM05D005206 ORTHO05D006219 4.7e-193 678.3 505 67.1
CAN.G1160.5 Capsicum annuum HOM05D005206 ORTHO05D006219 1.8e-192 676.4 526 66.2
Nitab4.5_0005722g0070 Nicotiana tabacum HOM05D005206 ORTHO05D006219 2.3e-192 676.0 544 64.2
HanXRQChr16g0527551 Helianthus annuus HOM05D005206 ORTHO05D006219 3.1e-192 675.6 509 68.6
PGR119G2380 Punica granatum HOM05D005206 ORTHO05D006219 1.7e-190 669.8 528 65.7
Sc11g0001370 Simmondsia chinensis HOM05D005206 ORTHO05D006219 1.4e-189 666.8 538 63.8
Migut.L01447 Erythranthe guttata HOM05D005206 ORTHO05D006219 7.0e-189 664.5 521 65.8
Actinidia15006 Actinidia chinensis HOM05D005206 ORTHO05D006219 9.2e-189 664.1 550 63.1
Hund25315 Selenicereus undatus HOM05D005206 ORTHO05D006219 2.7e-188 662.5 543 64.5
SalBow2G2775 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.9e-187 658.7 530 64.7
MSTRG.7873 Avicennia marina HOM05D005206 ORTHO05D006219 8.6e-187 657.5 511 64.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 4.3e-186 655.2 559 62.8
Sopen05g002140 Solanum pennellii HOM05D005206 ORTHO05D006219 1.5e-183 646.7 532 63.3
Haze_12137 Corylus avellana HOM05D005206 ORTHO05D006219 5.8e-183 644.8 597 59.3
DCAR_007103 Daucus carota HOM05D005206 ORTHO05D006219 5.8e-183 644.8 538 63.6
Gohir.D01G132600 Gossypium hirsutum HOM05D005206 ORTHO05D006219 1.3e-182 643.7 530 64.0
Solyc05g006120.3 Solanum lycopersicum HOM05D005206 ORTHO05D006219 1.3e-182 643.7 526 64.1
ECA236G3606 Erigeron canadensis HOM05D005206 ORTHO05D006219 3.7e-182 642.1 518 63.5
AUR62039408 Chenopodium quinoa HOM05D005206 ORTHO05D006219 3.2e-181 639.0 580 59.5
SGA_v2.0_scaffold166G38340 Striga asiatica HOM05D005206 ORTHO05D006219 3.9e-179 632.1 619 55.6
Os06g0237200 Oryza sativa ssp. japonica HOM05D005206 ORTHO05D006219 2.5e-178 629.4 534 59.7
Peaxi162Scf00421g00833 Petunia axillaris HOM05D005206 ORTHO05D006219 2.5e-178 629.4 530 62.5
AL1G21320 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 3.6e-177 625.5 452 70.6
Duzib248G0782 Durio zibethinus HOM05D005206 ORTHO05D006219 3.4e-175 619.0 534 60.9
Zm00001eb371940 Zea mays HOM05D005206 ORTHO05D006219 9.2e-173 610.9 536 59.3
Ca_18093_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 2.1e-172 609.8 494 62.8
TPR.G13491 Trifolium pratense HOM05D005206 ORTHO05D006219 5.6e-170 601.7 472 63.6
AT1G10520 Arabidopsis thaliana HOM05D005206 ORTHO05D006219 9.6e-170 600.9 469 65.9
TWI36G0196 Tripterygium wilfordii HOM05D005206 ORTHO05D006219 1.6e-169 600.1 463 67.6
MELO3C034123.2 Cucumis melo HOM05D005206 ORTHO05D006219 2.8e-169 599.4 576 57.3
SEGI_33189 Sequoiadendron giganteum HOM05D005206 ORTHO05D006219 4.7e-169 598.6 554 56.3
CiPaw.06G074900 Carya illinoinensis HOM05D005206 ORTHO05D006219 6.0e-164 581.6 392 74.0
Hund05954 Selenicereus undatus HOM05D005206 ORTHO05D006219 1.7e-163 580.1 572 56.1
ClCG05G025020 Citrullus lanatus HOM05D005206 ORTHO05D006219 1.5e-162 577.0 528 58.0
COL.COLO4_38096 Corchorus olitorius HOM05D005206 ORTHO05D006219 9.0e-160 567.8 523 60.2
Psat2g114280 Pisum sativum HOM05D005206 ORTHO05D006219 4.5e-159 565.5 446 63.9
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 1.9e-157 560.1 551 57.0
FAN12G3755 Fragaria x ananassa HOM05D005206 ORTHO05D006219 1.3e-155 553.9 534 57.3
unitig_748.g7742 Utricularia gibba HOM05D005206 ORTHO05D006219 1.8e-152 543.5 425 64.9
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 9.0e-152 541.2 504 57.3
FAN12G3075 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.2e-149 532.3 521 55.9
AagrBONN_evm.TU.Sc2ySwM_344.2272 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.6e-143 513.1 524 52.5
Prupe.1G259900 Prunus persica HOM05D005206 ORTHO05D006219 9.3e-141 504.6 394 66.8
Pp3c15_19010 Physcomitrium patens HOM05D005206 ORTHO05D006219 3.8e-134 482.6 562 47.7
AL1G24280 Arabidopsis lyrata HOM05D005206 ORTHO05D006219 8.5e-134 481.5 275 82.2
MD16G1086700 Malus domestica HOM05D005206 ORTHO05D006219 8.8e-131 471.5 271 80.8
Mapoly0057s0101 Marchantia polymorpha HOM05D005206 ORTHO05D006219 3.4e-127 459.5 460 53.7
SMO353G0008 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 1.8e-120 437.2 346 61.3
CDE07G1306 Ceratophyllum demersum HOM05D005206 ORTHO05D006219 5.7e-114 415.6 516 47.1
QL03p062590 Quercus lobata HOM05D005206 ORTHO05D006219 7.7e-111 405.2 547 46.4
CBR_g3482 Chara braunii HOM05D005206 ORTHO05D006219 2.9e-110 403.3 320 59.4
Oeu025446.1 Olea europaea HOM05D005206 ORTHO05D006219 1.5e-106 391.0 384 57.6
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.1e-96 358.2 217 74.7
SHI08107 Sapria himalayana HOM05D005206 ORTHO05D006219 4.2e-93 346.3 386 52.8
Cc11_g14230 Coffea canephora HOM05D005206 ORTHO05D006219 1.3e-89 334.7 378 51.6
FAN07G1959 Fragaria x ananassa HOM05D005206 ORTHO05D006219 2.2e-89 334.0 270 61.5
Cc11_g14240 Coffea canephora HOM05D005206 ORTHO05D006219 1.3e-86 324.7 186 79.6
HPP92_017067 Vanilla planifolia HOM05D005206 ORTHO05D006219 3.3e-85 320.1 391 49.4
PGSC0003DMG400015600 Solanum tuberosum HOM05D005206 ORTHO05D006219 1.2e-84 318.2 186 79.0
Mapoly0078s0005 Marchantia polymorpha HOM05D005206 ORTHO05D006219 8.9e-83 312.0 514 36.6
HPP92_017072 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.7e-79 300.4 208 67.3
AagrBONN_evm.TU.Sc2ySwM_362.251 Anthoceros agrestis HOM05D005206 ORTHO05D006219 2.8e-76 290.4 511 36.8
FAN17G0295 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.0e-75 286.6 275 58.5
CBR_g48616 Chara braunii HOM05D005206 ORTHO05D006219 4.4e-74 283.1 497 37.0
SMO235G0045 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 5.1e-70 269.6 312 43.9
SMO347G0124 Selaginella moellendorffii HOM05D005206 ORTHO05D006219 4.9e-65 253.1 314 43.6
MD16G1086600 Malus domestica HOM05D005206 ORTHO05D006219 3.3e-61 240.4 238 56.7
Cpa.g.sc5.344 Carica papaya HOM05D005206 ORTHO05D006219 2.8e-60 237.3 250 56.4
Cpa.g.sc5.345 Carica papaya HOM05D005206 ORTHO05D006219 8.9e-59 232.3 140 76.4
AUR62026578 Chenopodium quinoa HOM05D005206 ORTHO05D006219 5.1e-54 216.5 302 47.4
Cpa.g.sc5.348 Carica papaya HOM05D005206 ORTHO05D006219 6.6e-54 216.1 119 81.5
VMungo0464G1917 Vigna mungo HOM05D005206 ORTHO05D006219 9.9e-50 202.2 242 49.2
HPP92_017071 Vanilla planifolia HOM05D005206 ORTHO05D006219 1.1e-40 172.2 232 45.7
Cfa026399 Carpinus fangiana HOM05D005206 ORTHO05D006219 2.4e-40 171.0 357 31.9
PRCOL_00003765 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 1.9e-37 161.4 369 28.2
VMungo0464G2026 Vigna mungo HOM05D005206 ORTHO05D006219 4.3e-37 160.2 95 76.8
MCO16G526 Micromonas commoda HOM05D005206 ORTHO05D006219 6.9e-35 152.9 379 29.0
SHI08109 Sapria himalayana HOM05D005206 ORTHO05D006219 1.3e-33 148.7 122 60.7
FvH4_6g23350 Fragaria vesca HOM05D005206 ORTHO05D006219 2.3e-30 137.9 82 76.8
FvH4_5g07370 Fragaria vesca HOM05D003058 ORTHO05D003464 1.2e-23 115.5 99 60.6
RcHm_v2.0_Chr3g0484611 Rosa chinensis HOM05D005206 ORTHO05D006219 8.7e-22 109.4 62 80.6
Ca_04200_v3 Cicer arietinum L. HOM05D005206 ORTHO05D006219 1.8e-14 85.1 55 69.1
Cre17.g716101 Chlamydomonas reinhardtii HOM05D005206 ORTHO05D006219 2.3e-14 84.7 182 30.8
HPP92_017068 Vanilla planifolia HOM05D005206 ORTHO05D006219 2.3e-14 84.7 60 61.7
PRCOL_00003580 Prasinoderma coloniale HOM05D005206 ORTHO05D006219 6.5e-09 66.6 169 28.4
RcHm_v2.0_Chr4g0401081 Rosa chinensis HOM05D005206 ORTHO05D006219 2.3e-06 58.2 48 60.4


User provided reference genes

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