Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2053 Papaver somniferum HOM05D001429 ORTHO05D001420 1.1e-115 420.2 256 100.0
PSO063G0952 Papaver somniferum HOM05D001429 ORTHO05D001420 1.4e-49 200.7 272 60.7
MBI07_g04745_MAGBIO Magnolia biondii HOM05D001429 ORTHO05D001420 3.3e-11 73.2 134 46.3
DCAR_000646 Daucus carota HOM05D001429 ORTHO05D001420 4.3e-11 72.8 110 48.2
SGA_v2.0_scaffold127G34016 Striga asiatica HOM05D001429 ORTHO05D001420 4.3e-11 72.8 112 45.5
Ah.05g177950 Amaranthus hybridus HOM05D001429 ORTHO05D001420 5.7e-11 72.4 99 51.5
PSO717G0024 Papaver somniferum HOM05D001429 ORTHO05D001420 1.7e-10 70.9 113 47.8
PSO675G5190 Papaver somniferum HOM05D001429 ORTHO05D001420 2.8e-10 70.1 113 46.9
HPP92_000442 Vanilla planifolia HOM05D001429 ORTHO05D001420 2.8e-10 70.1 118 41.5
MBI01_g02258_MAGBIO Magnolia biondii HOM05D001429 ORTHO05D001420 4.8e-10 69.3 100 47.0
SGA_v2.0_scaffold116G32282 Striga asiatica HOM05D001429 ORTHO05D001420 4.8e-10 69.3 124 41.9
ATR0705G140 Amborella trichopoda HOM05D001429 ORTHO05D001420 8.2e-10 68.6 96 51.0
vmacro21064 Vaccinium macrocarpon HOM05D001429 ORTHO05D001420 8.2e-10 68.6 135 39.3
Hma1.2p1_2756F.1_g328020 Hydrangea macrophylla HOM05D001429 ORTHO05D001420 1.1e-09 68.2 112 43.8
Sopen01g035980 Solanum pennellii HOM05D001429 ORTHO05D001420 1.4e-09 67.8 95 46.3
Migut.A01034 Erythranthe guttata HOM05D001429 ORTHO05D001420 1.8e-09 67.4 100 50.0
QL12p009567 Quercus lobata HOM05D001429 ORTHO05D001420 2.4e-09 67.0 137 42.3
AagrBONN_evm.TU.Sc2ySwM_344.3349 Anthoceros agrestis HOM05D001429 ORTHO05D001420 3.1e-09 66.6 88 46.6
AUR62013759 Chenopodium quinoa HOM05D001429 ORTHO05D001420 3.1e-09 66.6 97 49.5
Os01g0721900 Oryza sativa ssp. japonica HOM05D001429 ORTHO05D001420 4.1e-09 66.2 120 45.8
Solyc01g090190.3 Solanum lycopersicum HOM05D001429 ORTHO05D001420 4.1e-09 66.2 105 41.0
unitig_750.g28411 Utricularia gibba HOM05D001429 ORTHO05D001420 4.1e-09 66.2 123 42.3
Duzib205G0586 Durio zibethinus HOM05D001429 ORTHO05D001420 6.9e-09 65.5 109 43.1
Sc26g0001630 Simmondsia chinensis HOM05D001429 ORTHO05D001420 6.9e-09 65.5 113 46.0
PGSC0003DMG400025998 Solanum tuberosum HOM05D001429 ORTHO05D001420 6.9e-09 65.5 105 41.0
CSS0018232 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 9.1e-09 65.1 130 43.1
CSS0024114 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 9.1e-09 65.1 130 43.1
DCAR_004601 Daucus carota HOM05D001429 ORTHO05D001420 9.1e-09 65.1 101 46.5
SEGI_09917 Sequoiadendron giganteum HOM05D001429 ORTHO05D001420 9.1e-09 65.1 90 45.6
arahy.Tifrunner.gnm1.ann1.C7EL2G Arachis hypogaea HOM05D001429 ORTHO05D001420 1.2e-08 64.7 133 40.6
Nn2g14485 Nelumbo nucifera HOM05D001429 ORTHO05D001420 1.2e-08 64.7 106 47.2
SEGI_34546 Sequoiadendron giganteum HOM05D001429 ORTHO05D001420 1.2e-08 64.7 88 47.7
Psat3g099160 Pisum sativum HOM05D001429 ORTHO05D001420 1.5e-08 64.3 110 43.6
Nitab4.5_0002685g0040 Nicotiana tabacum HOM05D001429 ORTHO05D001420 2.0e-08 63.9 105 41.0
Prupe.2G132500 Prunus persica HOM05D001429 ORTHO05D001420 2.0e-08 63.9 112 45.5
CiPaw.12G048100 Carya illinoinensis HOM05D001429 ORTHO05D001420 2.6e-08 63.5 114 45.6
AUR62023395 Chenopodium quinoa HOM05D001429 ORTHO05D001420 2.6e-08 63.5 87 49.4
Lj2C226G6 Lonicera japonica HOM05D001429 ORTHO05D001420 2.6e-08 63.5 106 39.6
MBI04_g22922_MAGBIO Magnolia biondii HOM05D001429 ORTHO05D001420 2.6e-08 63.5 124 41.9
QL09p049052 Quercus lobata HOM05D001429 ORTHO05D022508 2.6e-08 63.5 129 39.5
Actinidia02183 Actinidia chinensis HOM05D001429 ORTHO05D001420 3.4e-08 63.2 194 32.5
Lalb_Chr01g0021591 Lupinus albus HOM05D001429 ORTHO05D001420 3.4e-08 63.2 100 48.0
Phvul.008G047300 Phaseolus vulgaris HOM05D001429 ORTHO05D001420 3.4e-08 63.2 125 40.8
MSTRG.4933 Avicennia marina HOM05D001429 ORTHO05D001420 4.5e-08 62.8 97 49.5
BcaC03g16950 Brassica carinata HOM05D001429 ORTHO05D001420 4.5e-08 62.8 100 47.0
CAN.G1497.15 Capsicum annuum HOM05D001429 ORTHO05D001420 4.5e-08 62.8 106 41.5
CiPaw.14G041200 Carya illinoinensis HOM05D001429 ORTHO05D001420 5.9e-08 62.4 89 51.7
Nitab4.5_0000920g0060 Nicotiana tabacum HOM05D001429 ORTHO05D001420 5.9e-08 62.4 105 40.0
TAR374G1144 Trochodendron aralioides HOM05D001429 ORTHO05D001420 5.9e-08 62.4 105 39.0
Duzib084G0208 Durio zibethinus HOM05D001429 ORTHO05D001420 7.7e-08 62.0 102 45.1
Rhsim07G0036400 Rhododendron simsii HOM05D001429 ORTHO05D001420 7.7e-08 62.0 107 43.9
Cfa012663 Carpinus fangiana HOM05D001429 ORTHO05D001420 1.0e-07 61.6 106 42.5
MSTRG.20686 Avicennia marina HOM05D001429 ORTHO05D001420 1.3e-07 61.2 113 41.6
CsaV3_6G008690 Cucumis sativus L. HOM05D001429 ORTHO05D001420 1.3e-07 61.2 96 49.0
Pp3c7_26560 Physcomitrium patens HOM05D001429 ORTHO05D001420 1.3e-07 61.2 118 40.7
CSS0045630 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 1.7e-07 60.8 110 44.5
vmacro00034 Vaccinium macrocarpon HOM05D001429 ORTHO05D001420 1.7e-07 60.8 108 46.3
VMungo1383G0355 Vigna mungo HOM05D001429 ORTHO05D001420 1.7e-07 60.8 105 42.9
EL10Ac1g00747 Beta vulgaris HOM05D001429 ORTHO05D001420 2.2e-07 60.5 105 44.8
Gohir.A09G196800 Gossypium hirsutum HOM05D001429 ORTHO05D001420 2.2e-07 60.5 101 44.6
Gohir.D09G191400 Gossypium hirsutum HOM05D001429 ORTHO05D001420 2.2e-07 60.5 101 44.6
Gorai.006G214200 Gossypium raimondii HOM05D001429 ORTHO05D001420 2.2e-07 60.5 101 44.6
MD07G1109500 Malus domestica HOM05D001429 ORTHO05D001420 2.2e-07 60.5 111 42.3
Aa31sc89G130 Aethionema arabicum HOM05D001429 ORTHO05D001420 2.9e-07 60.1 105 42.9
ECA240G0458 Erigeron canadensis HOM05D001429 ORTHO05D001420 2.9e-07 60.1 107 43.0
Eucgr.D02118 Eucalyptus grandis HOM05D001429 ORTHO05D001420 2.9e-07 60.1 100 44.0
MD02G1213500 Malus domestica HOM05D001429 ORTHO05D001420 2.9e-07 60.1 101 48.5
Manes.01G086200 Manihot esculenta HOM05D001429 ORTHO05D001420 2.9e-07 60.1 106 40.6
Actinidia31503 Actinidia chinensis HOM05D001429 ORTHO05D001420 3.8e-07 59.7 111 44.1
Carub.0007s2451 Capsella rubella HOM05D001429 ORTHO05D001420 3.8e-07 59.7 107 41.1
Duzib268G0869 Durio zibethinus HOM05D001429 ORTHO05D001420 3.8e-07 59.7 92 47.8
Oeu031157.1 Olea europaea HOM05D001429 ORTHO05D001420 3.8e-07 59.7 97 47.4
Os05g0589600 Oryza sativa ssp. japonica HOM05D001429 ORTHO05D001420 5.0e-07 59.3 125 42.4
Potri.002G138300 Populus trichocarpa HOM05D001429 ORTHO05D001420 5.0e-07 59.3 123 43.1
Nn6g33814 Nelumbo nucifera HOM05D001429 ORTHO05D001420 6.5e-07 58.9 108 43.5
Thecc.01G395600 Theobroma cacao HOM05D001429 ORTHO05D001420 6.5e-07 58.9 92 47.8
TWI23G0570 Tripterygium wilfordii HOM05D001429 ORTHO05D001420 6.5e-07 58.9 130 36.2
TAR375G0305 Trochodendron aralioides HOM05D001429 ORTHO05D001420 6.5e-07 58.9 97 47.4
vmacro14134 Vaccinium macrocarpon HOM05D001429 ORTHO05D001420 6.5e-07 58.9 94 44.7
GSVIVG01002125001 Vitis vinifera HOM05D001429 ORTHO05D001420 6.5e-07 58.9 107 39.3
Haze_07983 Corylus avellana HOM05D001429 ORTHO05D001420 8.5e-07 58.5 88 46.6
Gohir.A08G029201 Gossypium hirsutum HOM05D001429 ORTHO05D001420 8.5e-07 58.5 104 41.3
Gorai.004G038700 Gossypium raimondii HOM05D001429 ORTHO05D001420 8.5e-07 58.5 104 41.3
QL04p030014 Quercus lobata HOM05D001429 ORTHO05D001420 8.5e-07 58.5 88 47.7
GSVIVG01018290001 Vitis vinifera HOM05D001429 ORTHO05D001420 8.5e-07 58.5 90 46.7
ATR0057G051 Amborella trichopoda HOM05D001429 ORTHO05D001420 1.1e-06 58.2 103 38.8
arahy.Tifrunner.gnm1.ann1.6LE7D6 Arachis hypogaea HOM05D001429 ORTHO05D001420 1.1e-06 58.2 121 38.8
BcaNung00084 Brassica carinata HOM05D001429 ORTHO05D001420 1.1e-06 58.2 122 44.3
C01p11170 Brassica napus HOM05D001429 ORTHO05D001420 1.1e-06 58.2 148 37.8
BolC1t01082H Brassica oleracea HOM05D001429 ORTHO05D001420 1.1e-06 58.2 139 38.8
Manes.01G274200 Manihot esculenta HOM05D001429 ORTHO05D001420 1.1e-06 58.2 111 42.3
Zm00001eb154690 Zea mays HOM05D001429 ORTHO05D001420 1.1e-06 58.2 111 44.1
Actinidia23780 Actinidia chinensis HOM05D001429 ORTHO05D001420 1.4e-06 57.8 134 37.3
Aa31LG2G13020 Aethionema arabicum HOM05D001429 ORTHO05D001420 1.4e-06 57.8 107 41.1
AL7G37810 Arabidopsis lyrata HOM05D001429 ORTHO05D001420 1.4e-06 57.8 107 43.9
CSS0006185 Camellia sinensis var. sinensis HOM05D001429 ORTHO05D001420 1.4e-06 57.8 102 46.1
CDE05G1379 Ceratophyllum demersum HOM05D001429 ORTHO05D001420 1.4e-06 57.8 121 39.7
Dinv43611 Davidia involucrata HOM05D001429 ORTHO05D001420 1.4e-06 57.8 89 49.4
Migut.B01530 Erythranthe guttata HOM05D001429 ORTHO05D001420 1.4e-06 57.8 110 40.0
Manes.02G043300 Manihot esculenta HOM05D001429 ORTHO05D001420 1.4e-06 57.8 134 39.6
Sp7g17250 Schrenkiella parvula HOM05D001429 ORTHO05D001420 1.4e-06 57.8 108 42.6
Sed0000430 Sechium edule HOM05D001429 ORTHO05D001420 1.4e-06 57.8 105 41.0
Atru.chr5.120 Acer truncatum HOM05D001429 ORTHO05D001420 1.9e-06 57.4 113 43.4
AT4G16830 Arabidopsis thaliana HOM05D001429 ORTHO05D001420 1.9e-06 57.4 109 43.1
Gohir.A08G138900 Gossypium hirsutum HOM05D001429 ORTHO05D001420 1.9e-06 57.4 91 47.3
Gohir.D08G160000 Gossypium hirsutum HOM05D001429 ORTHO05D001420 1.9e-06 57.4 91 47.3
Gorai.004G166200 Gossypium raimondii HOM05D001429 ORTHO05D001420 1.9e-06 57.4 91 47.3
Gorai.004G166300 Gossypium raimondii HOM05D001429 ORTHO05D001420 1.9e-06 57.4 91 47.3
Nitab4.5_0000185g0150 Nicotiana tabacum HOM05D001429 ORTHO05D001420 1.9e-06 57.4 93 46.2
Gohir.A08G138700 Gossypium hirsutum HOM05D001429 ORTHO05D001420 2.5e-06 57.0 109 44.0
Nitab4.5_0006594g0050 Nicotiana tabacum HOM05D001429 ORTHO05D001420 2.5e-06 57.0 89 47.2
Rhsim07G0117800 Rhododendron simsii HOM05D001429 ORTHO05D001420 2.5e-06 57.0 96 44.8
Hund27411 Selenicereus undatus HOM05D001429 ORTHO05D001420 2.5e-06 57.0 99 46.5
COL.COLO4_10016 Corchorus olitorius HOM05D001429 ORTHO05D001420 3.2e-06 56.6 93 41.9
Duzib068G1311 Durio zibethinus HOM05D001429 ORTHO05D001420 3.2e-06 56.6 93 43.0
Lj7P558T34 Lonicera japonica HOM05D001429 ORTHO05D001420 3.2e-06 56.6 85 45.9
Os05g0533100 Oryza sativa ssp. japonica HOM05D001429 ORTHO05D001420 3.2e-06 56.6 109 41.3
Potri.014G049300 Populus trichocarpa HOM05D001429 ORTHO05D001420 3.2e-06 56.6 132 39.4
Sabra02G0107900 Salix brachista HOM05D001429 ORTHO05D001420 3.2e-06 56.6 123 40.7
Hund17103 Selenicereus undatus HOM05D001429 ORTHO05D001420 3.2e-06 56.6 75 50.7
THA.LOC104807920 Tarenaya hassleriana HOM05D001429 ORTHO05D001420 3.2e-06 56.6 102 46.1
Thecc.03G244100 Theobroma cacao HOM05D001429 ORTHO05D001420 3.2e-06 56.6 94 42.6
arahy.Tifrunner.gnm1.ann1.5L4YH4 Arachis hypogaea HOM05D001429 ORTHO05D001420 4.2e-06 56.2 120 42.5
Peaxi162Scf00102g00839 Petunia axillaris HOM05D001429 ORTHO05D001420 4.2e-06 56.2 112 42.9
Rhsim01G0141100 Rhododendron simsii HOM05D001429 ORTHO05D001420 4.2e-06 56.2 100 44.0
BcaB04g18425 Brassica carinata HOM05D001429 ORTHO05D001420 5.5e-06 55.8 126 43.7
CiPaw.14G020000 Carya illinoinensis HOM05D001429 ORTHO05D001420 5.5e-06 55.8 86 45.3
Oeu011237.1 Olea europaea HOM05D001429 ORTHO05D001420 5.5e-06 55.8 127 37.0
Pp3c2_30970 Physcomitrium patens HOM05D001429 ORTHO05D001420 5.5e-06 55.8 125 38.4
SMO203G0040 Selaginella moellendorffii HOM05D001429 ORTHO05D001420 5.5e-06 55.8 115 38.3
BcaB04g18394 Brassica carinata HOM05D001429 ORTHO05D001420 7.2e-06 55.5 107 42.1
A01p09600 Brassica napus HOM05D001429 ORTHO05D001420 7.2e-06 55.5 108 44.4
BraA01t00902Z Brassica rapa HOM05D001429 ORTHO05D001420 7.2e-06 55.5 108 44.4
Lsat_1_v5_gn_3_126861 Lactuca sativa HOM05D001429 ORTHO05D001420 7.2e-06 55.5 122 40.2
MD06G1049800 Malus domestica HOM05D001429 ORTHO05D001420 7.2e-06 55.5 132 40.9
Sabra03G0052600 Salix brachista HOM05D001429 ORTHO05D000003 7.2e-06 55.5 96 44.8
Solyc08g007220.3 Solanum lycopersicum HOM05D001429 ORTHO05D001420 7.2e-06 55.5 177 33.9
Sopen08g003170 Solanum pennellii HOM05D001429 ORTHO05D001420 7.2e-06 55.5 177 33.9
arahy.Tifrunner.gnm1.ann1.180UYH Arachis hypogaea HOM05D001429 ORTHO05D001420 9.4e-06 55.1 141 36.2
BcaC09g51634 Brassica carinata HOM05D001429 ORTHO05D001420 9.4e-06 55.1 124 42.7
CDE02G0684 Ceratophyllum demersum HOM05D001429 ORTHO05D001420 9.4e-06 55.1 117 45.3
ClCG06G002440 Citrullus lanatus HOM05D001429 ORTHO05D001420 9.4e-06 55.1 169 32.5
DCAR_029471 Daucus carota HOM05D001429 ORTHO05D001420 9.4e-06 55.1 100 42.0
RcHm_v2.0_Chr1g0348031 Rosa chinensis HOM05D001429 ORTHO05D001420 9.4e-06 55.1 145 37.9
RcHm_v2.0_Chr7g0204831 Rosa chinensis HOM05D001429 ORTHO05D001420 9.4e-06 55.1 113 44.2
THA.LOC104807918 Tarenaya hassleriana HOM05D001429 ORTHO05D001420 9.4e-06 55.1 102 45.1


User provided reference genes

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