Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006479 Prasinoderma coloniale HOM05D004558 ORTHO05D005647 7.4e-203 710.3 354 100.0
Duzib128G1152 Durio zibethinus HOM05D004558 ORTHO05D005647 1.6e-152 543.1 357 74.2
Gohir.A01G192400 Gossypium hirsutum HOM05D004558 ORTHO05D005647 6.0e-152 541.2 357 73.4
ATR1096G103 Amborella trichopoda HOM05D004558 ORTHO05D005647 7.8e-152 540.8 357 73.1
Cpa.g.sc92.57 Carica papaya HOM05D004558 ORTHO05D005647 7.8e-152 540.8 357 73.7
PGR042G2423 Punica granatum HOM05D004558 ORTHO05D005647 7.8e-152 540.8 357 73.7
AUR62020990 Chenopodium quinoa HOM05D004558 ORTHO05D005647 3.0e-151 538.9 357 72.3
Eucgr.A02177 Eucalyptus grandis HOM05D004558 ORTHO05D005647 3.0e-151 538.9 357 73.1
Thecc.05G130200 Theobroma cacao HOM05D004558 ORTHO05D005647 3.0e-151 538.9 357 73.4
AUR62018443 Chenopodium quinoa HOM05D004558 ORTHO05D005647 3.9e-151 538.5 357 72.3
Ciclev10011842m.g Citrus clementina HOM05D004558 ORTHO05D005647 3.9e-151 538.5 360 73.9
Sabra16G0030900 Salix brachista HOM05D004558 ORTHO05D005647 5.0e-151 538.1 357 73.1
SMO119G0375 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 5.0e-151 538.1 357 72.8
Prupe.7G022500 Prunus persica HOM05D004558 ORTHO05D005647 6.6e-151 537.7 357 72.5
arahy.Tifrunner.gnm1.ann1.VDKY5W Arachis hypogaea HOM05D004558 ORTHO05D005647 8.6e-151 537.3 357 72.8
arahy.Tifrunner.gnm1.ann1.XE2WF0 Arachis hypogaea HOM05D004558 ORTHO05D005647 8.6e-151 537.3 357 72.8
Manes.09G073800 Manihot esculenta HOM05D004558 ORTHO05D005647 8.6e-151 537.3 357 73.1
Sc19g0007850 Simmondsia chinensis HOM05D004558 ORTHO05D005647 8.6e-151 537.3 357 73.1
DCAR_013513 Daucus carota HOM05D004558 ORTHO05D005647 1.1e-150 537.0 356 72.8
THA.LOC104824384 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.1e-150 537.0 357 72.8
Duzib093G1273 Durio zibethinus HOM05D004558 ORTHO05D005647 1.5e-150 536.6 357 73.1
MBI13_g30268_MAGBIO Magnolia biondii HOM05D004558 ORTHO05D005647 1.5e-150 536.6 357 72.8
GSVIVG01025841001 Vitis vinifera HOM05D004558 ORTHO05D005647 1.5e-150 536.6 357 72.5
Aqoxy2G00035_Aqoxy2G00036 Aquilegia oxysepala HOM05D004558 ORTHO05D005647 1.9e-150 536.2 353 73.4
Lj1g0019045 Lotus japonicus HOM05D004558 ORTHO05D005647 1.9e-150 536.2 357 72.8
DCAR_016944 Daucus carota HOM05D004558 ORTHO05D005647 2.5e-150 535.8 356 73.0
Gohir.D01G177500 Gossypium hirsutum HOM05D004558 ORTHO05D005647 2.5e-150 535.8 348 74.4
Potri.006G027300 Populus trichocarpa HOM05D004558 ORTHO05D005647 3.3e-150 535.4 357 72.5
TWI53G2040 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 3.3e-150 535.4 357 72.0
QL07p015188 Quercus lobata HOM05D004558 ORTHO05D005647 4.3e-150 535.0 356 72.8
Aa31LG10G11840 Aethionema arabicum HOM05D004558 ORTHO05D005647 5.6e-150 534.6 357 72.3
PSO339G0825 Papaver somniferum HOM05D004558 ORTHO05D005647 5.6e-150 534.6 353 73.7
Pp3c11_7910 Physcomitrium patens HOM05D004558 ORTHO05D005647 7.3e-150 534.3 356 72.2
Potri.016G025000 Populus trichocarpa HOM05D004558 ORTHO05D005647 7.3e-150 534.3 357 72.5
Cc06_g22740 Coffea canephora HOM05D004558 ORTHO05D005647 9.5e-150 533.9 357 72.5
Thhalv10006009m.g Eutrema salsugineum HOM05D004558 ORTHO05D005647 9.5e-150 533.9 357 72.5
Glyma.03G119500 Glycine max HOM05D004558 ORTHO05D005647 9.5e-150 533.9 348 74.1
Hund24509 Selenicereus undatus HOM05D004558 ORTHO05D005647 1.2e-149 533.5 357 72.5
SEGI_29193 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 1.2e-149 533.5 357 71.4
THA.LOC104803235 Tarenaya hassleriana HOM05D004558 ORTHO05D005647 1.2e-149 533.5 357 72.5
TAR369G0680 Trochodendron aralioides HOM05D004558 ORTHO05D005647 1.2e-149 533.5 357 72.3
BcaC07g40007 Brassica carinata HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.3
BcaC07g40105 Brassica carinata HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.5
A09p49810 Brassica napus HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.3
BraA07t29976Z Brassica rapa HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.5
BraA09t40434Z Brassica rapa HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.3
Carub.0005s2368 Capsella rubella HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 72.3
Os01g0279100 Oryza sativa ssp. japonica HOM05D004558 ORTHO05D005647 1.6e-149 533.1 357 71.7
PSO384G3158 Papaver somniferum HOM05D004558 ORTHO05D005647 1.6e-149 533.1 353 73.4
AL5G38370 Arabidopsis lyrata HOM05D004558 ORTHO05D005647 2.1e-149 532.7 357 72.3
BcaB02g07634 Brassica carinata HOM05D004558 ORTHO05D005647 2.1e-149 532.7 357 72.3
BcaC08g44811 Brassica carinata HOM05D004558 ORTHO05D005647 2.1e-149 532.7 357 72.3
BolC6t37555H Brassica oleracea HOM05D004558 ORTHO05D005647 2.1e-149 532.7 357 72.3
CSS0026074 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.1e-149 532.7 356 72.5
CSS0045826 Camellia sinensis var. sinensis HOM05D004558 ORTHO05D005647 2.1e-149 532.7 356 72.5
TPR.G23197 Trifolium pratense HOM05D004558 ORTHO05D005647 2.1e-149 532.7 357 72.8
Actinidia38207 Actinidia chinensis HOM05D004558 ORTHO05D005647 2.8e-149 532.3 353 72.8
CiPaw.09G162600 Carya illinoinensis HOM05D004558 ORTHO05D005647 2.8e-149 532.3 357 72.0
Nitab4.5_0000123g0170 Nicotiana tabacum HOM05D004558 ORTHO05D005647 2.8e-149 532.3 357 72.5
Phvul.001G108700 Phaseolus vulgaris HOM05D004558 ORTHO05D005647 2.8e-149 532.3 357 71.7
CARHR167090 Cardamine hirsuta HOM05D004558 ORTHO05D005647 3.6e-149 531.9 357 72.0
A07p23140 Brassica napus HOM05D004558 ORTHO05D005647 4.7e-149 531.6 357 72.3
Hma1.2p1_0251F.1_g102500 Hydrangea macrophylla HOM05D004558 ORTHO05D005647 4.7e-149 531.6 355 72.7
Sp5g05650 Schrenkiella parvula HOM05D004558 ORTHO05D005647 4.7e-149 531.6 357 72.5
TWI77G0093 Tripterygium wilfordii HOM05D004558 ORTHO05D005647 4.7e-149 531.6 357 72.3
Zm00001eb332650 Zea mays HOM05D004558 ORTHO05D005647 4.7e-149 531.6 357 71.1
FvH4_1g28960 Fragaria vesca HOM05D004558 ORTHO05D005647 6.2e-149 531.2 353 72.2
VMungo1383G3341 Vigna mungo HOM05D004558 ORTHO05D005647 6.2e-149 531.2 356 71.3
ClCG04G004930 Citrullus lanatus HOM05D004558 ORTHO05D005647 8.1e-149 530.8 353 73.1
FAN19G1019 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.1e-148 530.4 353 72.2
FAN23G1063 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.1e-148 530.4 353 72.2
FAN26G0634 Fragaria x ananassa HOM05D004558 ORTHO05D005647 1.1e-148 530.4 353 72.2
Lalb_Chr14g0365301 Lupinus albus HOM05D004558 ORTHO05D005647 1.1e-148 530.4 357 72.0
RcHm_v2.0_Chr3g0494361 Rosa chinensis HOM05D004558 ORTHO05D005647 1.1e-148 530.4 357 71.4
Sabra06G0020200 Salix brachista HOM05D004558 ORTHO05D005647 1.1e-148 530.4 357 71.7
SGA_v2.0_scaffold66G22316 Striga asiatica HOM05D004558 ORTHO05D005647 1.1e-148 530.4 357 71.7
Zm00001eb129000 Zea mays HOM05D004558 ORTHO05D005647 1.1e-148 530.4 353 72.0
Nitab4.5_0001270g0120 Nicotiana tabacum HOM05D004558 ORTHO05D005647 1.8e-148 529.6 357 72.0
CANSAT78G1575 Cannabis sativa HOM05D004558 ORTHO05D005647 2.3e-148 529.3 353 72.2
Cre12.g510050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 2.3e-148 529.3 358 70.7
Actinidia00883 Actinidia chinensis HOM05D004558 ORTHO05D005647 3.1e-148 528.9 353 72.5
AagrBONN_evm.TU.Sc2ySwM_228.50 Anthoceros agrestis HOM05D004558 ORTHO05D005647 3.1e-148 528.9 357 70.9
CAN.G959.37 Capsicum annuum HOM05D004558 ORTHO05D005647 3.1e-148 528.9 348 73.6
Cfa019915 Carpinus fangiana HOM05D004558 ORTHO05D005647 3.1e-148 528.9 357 71.4
CsaV3_4G031720 Cucumis sativus L. HOM05D004558 ORTHO05D005647 3.1e-148 528.9 353 72.8
Sed0025713 Sechium edule HOM05D004558 ORTHO05D005647 3.1e-148 528.9 353 72.2
HPP92_000696 Vanilla planifolia HOM05D004558 ORTHO05D005647 3.1e-148 528.9 356 72.5
FAN28G2842 Fragaria x ananassa HOM05D004558 ORTHO05D005647 4.0e-148 528.5 353 72.0
Gorai.002G225700 Gossypium raimondii HOM05D004558 ORTHO05D005647 5.2e-148 528.1 357 72.5
MSTRG.6287 Avicennia marina HOM05D004558 ORTHO05D005647 8.9e-148 527.3 353 72.2
Lsat_1_v5_gn_9_30221 Lactuca sativa HOM05D004558 ORTHO05D005647 8.9e-148 527.3 357 71.1
Sopen10g028720 Solanum pennellii HOM05D004558 ORTHO05D005647 8.9e-148 527.3 348 73.6
PGSC0003DMG400007188 Solanum tuberosum HOM05D004558 ORTHO05D005647 1.5e-147 526.6 348 73.6
CDE02G2354 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.0e-147 526.2 357 72.0
Medtr7g088340 Medicago truncatula HOM05D004558 ORTHO05D005647 2.0e-147 526.2 351 73.2
ECA247G1747 Erigeron canadensis HOM05D004558 ORTHO05D005647 2.6e-147 525.8 357 71.1
Solyc10g077040.2 Solanum lycopersicum HOM05D004558 ORTHO05D005647 2.6e-147 525.8 348 73.3
TAR546G0001 Trochodendron aralioides HOM05D004558 ORTHO05D005647 2.6e-147 525.8 357 71.1
Haze_20335 Corylus avellana HOM05D004558 ORTHO05D005647 5.8e-147 524.6 355 71.0
HanXRQChr10g0291961 Helianthus annuus HOM05D004558 ORTHO05D005647 7.5e-147 524.2 353 71.1
Mapoly0124s0017 Marchantia polymorpha HOM05D004558 ORTHO05D005647 9.9e-147 523.9 353 71.7
Lj1A1078T64 Lonicera japonica HOM05D004558 ORTHO05D005647 1.7e-146 523.1 348 72.7
vmacro08967 Vaccinium macrocarpon HOM05D004558 ORTHO05D005647 2.9e-146 522.3 352 71.6
Oeu023011.1 Olea europaea HOM05D004558 ORTHO05D005647 3.7e-146 521.9 366 70.2
Rhsim04G0119100 Rhododendron simsii HOM05D004558 ORTHO05D005647 4.9e-146 521.5 352 71.6
Lalb_Chr24g0400681 Lupinus albus HOM05D004558 ORTHO05D005647 6.4e-146 521.2 357 70.0
C06p23840 Brassica napus HOM05D004558 ORTHO05D005647 1.9e-145 519.6 361 70.6
MCO13G411 Micromonas commoda HOM05D004558 ORTHO05D005647 2.4e-145 519.2 347 73.2
Migut.K00174 Erythranthe guttata HOM05D004558 ORTHO05D005647 3.2e-145 518.8 357 70.6
Peaxi162Scf00003g05355 Petunia axillaris HOM05D004558 ORTHO05D005647 7.1e-145 517.7 379 68.1
unitig_46.g18485 Utricularia gibba HOM05D004558 ORTHO05D005647 1.6e-144 516.5 357 70.3
Oeu060750.2 Olea europaea HOM05D004558 ORTHO05D005647 2.3e-143 512.7 367 68.4
Rhsim04G0119000 Rhododendron simsii HOM05D004558 ORTHO05D005647 3.9e-143 511.9 366 68.9
Cre07.g346050 Chlamydomonas reinhardtii HOM05D004558 ORTHO05D005647 2.6e-139 499.2 352 68.2
AT3G56940 Arabidopsis thaliana HOM05D004558 ORTHO05D005647 3.4e-139 498.8 333 72.4
unitig_37.g12773 Utricularia gibba HOM05D004558 ORTHO05D005647 1.4e-137 493.4 323 73.7
Atru.chr1.1539 Acer truncatum HOM05D004558 ORTHO05D005647 1.5e-134 483.4 286 79.4
CDE04G3757 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 7.1e-129 464.5 357 65.3
EL10Ac3g07349 Beta vulgaris HOM05D004558 ORTHO05D005647 1.6e-128 463.4 357 64.4
Psat3g082520 Pisum sativum HOM05D004558 ORTHO05D005647 4.8e-125 451.8 265 80.4
Ca_08344_v3 Cicer arietinum L. HOM05D004558 ORTHO05D005647 6.9e-124 448.0 262 80.5
Pp3c7_26570 Physcomitrium patens HOM05D004558 ORTHO05D005647 1.2e-123 447.2 268 77.6
Dinv11638 Davidia involucrata HOM05D004558 ORTHO05D005647 5.8e-123 444.9 260 80.4
HPP92_000650 Vanilla planifolia HOM05D004558 ORTHO05D005647 1.1e-121 440.7 260 80.4
SGA_v2.0_scaffold69G23196 Striga asiatica HOM05D004558 ORTHO05D005647 6.7e-119 431.4 349 62.8
SMO115G0161 Selaginella moellendorffii HOM05D004558 ORTHO05D005647 1.5e-115 420.2 359 59.9
MELO3C026802.2 Cucumis melo HOM05D004558 ORTHO05D005647 1.3e-109 400.6 233 81.5
Glyma.19G123800 Glycine max HOM05D004558 ORTHO05D005647 8.2e-109 397.9 228 82.0
Ah.04g150190 Amaranthus hybridus HOM05D004558 ORTHO05D005647 2.1e-104 383.3 357 56.0
CDE02G0342 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 2.2e-101 373.2 232 75.4
CBR_g50688 Chara braunii HOM05D004558 ORTHO05D005647 9.0e-100 367.9 237 74.3
SalBow6G0122 Salvia bowleyana HOM05D004558 ORTHO05D005647 2.1e-96 356.7 247 69.6
SalBow1G4785 Salvia bowleyana HOM05D004558 ORTHO05D005647 6.5e-90 335.1 305 58.0
Oeu021019.1 Olea europaea HOM05D004558 ORTHO05D005647 1.9e-73 280.4 269 55.8
CBR_g55376 Chara braunii HOM05D004558 ORTHO05D005647 2.9e-45 186.8 128 72.7
BolC4t25242H Brassica oleracea HOM05D004558 ORTHO05D005647 1.0e-34 151.8 132 57.6
C04p35620 Brassica napus HOM05D004558 ORTHO05D005647 1.3e-34 151.4 132 56.8
Pp3c2_30650 Physcomitrium patens HOM05D004558 ORTHO05D005647 2.8e-32 143.7 101 69.3
SEGI_05566 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 3.0e-26 123.6 118 50.8
SEGI_20922 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 1.1e-25 121.7 118 50.0
Ah.13g077400 Amaranthus hybridus HOM05D004558 ORTHO05D000435 5.8e-22 109.4 148 45.3
A04p03620 Brassica napus HOM05D004558 ORTHO05D005647 2.4e-20 104.0 103 51.5
C08p32210 Brassica napus HOM05D004558 ORTHO05D005647 2.4e-20 104.0 103 51.5
BraA04t16073Z Brassica rapa HOM05D004558 ORTHO05D005647 2.4e-20 104.0 103 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2127 Anthoceros agrestis HOM05D004558 ORTHO05D005647 2.1e-19 100.9 72 66.7
ClCG10G010310 Citrullus lanatus HOM05D004558 ORTHO05D005647 6.0e-19 99.4 71 63.4
Lalb_Chr22g0357681 Lupinus albus HOM05D004558 ORTHO05D005647 7.8e-19 99.0 76 64.5
AagrBONN_evm.TU.Sc2ySwM_344.4282 Anthoceros agrestis HOM05D004558 ORTHO05D000003 7.3e-17 92.4 80 58.8
BcaC02g09879 Brassica carinata HOM05D004558 ORTHO05D005647 1.6e-16 91.3 93 50.5
CDE02G4696 Ceratophyllum demersum HOM05D004558 ORTHO05D005647 1.8e-15 87.8 93 49.5
Lalb_Chr22g0358091 Lupinus albus HOM05D004558 ORTHO05D005647 1.2e-14 85.1 47 74.5
SEGI_00644 Sequoiadendron giganteum HOM05D004558 ORTHO05D005647 5.1e-10 69.7 42 78.6
ClCG10G010320 Citrullus lanatus HOM05D004558 ORTHO05D005647 1.6e-08 64.7 77 45.5
Lalb_Chr22g0358081 Lupinus albus HOM05D004558 ORTHO05D005647 2.1e-08 64.3 39 74.4
BcaB02g08342 Brassica carinata HOM05D004558 ORTHO05D005647 2.6e-06 57.4 104 36.5
MSTRG.26191 Avicennia marina HOM05D004558 ORTHO05D087779 7.6e-06 55.8 53 58.5


User provided reference genes

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