Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00005787 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 2.2e-174 615.5 312 100.0
Mapoly0056s0030 Marchantia polymorpha HOM05D002690 ORTHO05D005709 1.6e-39 167.5 174 47.1
Pp3c20_9290 Physcomitrium patens HOM05D002690 ORTHO05D005709 2.1e-39 167.2 190 46.3
Atru.chr10.891 Acer truncatum HOM05D002690 ORTHO05D005709 1.5e-37 161.0 157 51.0
CDE04G1060 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 3.3e-37 159.8 184 46.2
Cre24.g755647 Chlamydomonas reinhardtii HOM05D002690 ORTHO05D005709 4.3e-37 159.5 187 41.7
Ciclev10014454m.g Citrus clementina HOM05D002690 ORTHO05D005709 7.3e-37 158.7 160 48.8
MD10G1253900 Malus domestica HOM05D002690 ORTHO05D005709 7.3e-37 158.7 157 48.4
Glyma.09G022200 Glycine max HOM05D002690 ORTHO05D005709 9.6e-37 158.3 157 48.4
CDE12G0823 Ceratophyllum demersum HOM05D002690 ORTHO05D005709 1.3e-36 157.9 148 50.7
PSO675G8993 Papaver somniferum HOM05D002690 ORTHO05D005709 1.3e-36 157.9 156 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1691 Anthoceros agrestis HOM05D002690 ORTHO05D005709 2.1e-36 157.1 187 43.3
Oeu060303.1 Olea europaea HOM05D002690 ORTHO05D005709 2.1e-36 157.1 111 57.7
Aa31LG10G6630 Aethionema arabicum HOM05D002690 ORTHO05D005709 2.8e-36 156.8 152 48.7
RcHm_v2.0_Chr5g0015861 Rosa chinensis HOM05D002690 ORTHO05D005709 3.6e-36 156.4 151 47.7
Glyma.15G128500 Glycine max HOM05D002690 ORTHO05D005709 4.8e-36 156.0 157 48.4
Phvul.006G130200 Phaseolus vulgaris HOM05D002690 ORTHO05D005709 4.8e-36 156.0 154 48.1
AT1G30460 Arabidopsis thaliana HOM05D002690 ORTHO05D005709 6.2e-36 155.6 150 50.0
Lsat_1_v5_gn_4_29061 Lactuca sativa HOM05D002690 ORTHO05D005709 6.2e-36 155.6 147 47.6
MD05G1274200 Malus domestica HOM05D002690 ORTHO05D005709 6.2e-36 155.6 160 46.9
PSO541G0016 Papaver somniferum HOM05D002690 ORTHO05D005709 6.2e-36 155.6 156 45.5
Lsat_1_v5_gn_7_29481 Lactuca sativa HOM05D002690 ORTHO05D005709 8.1e-36 155.2 110 58.2
Lalb_Chr15g0088721 Lupinus albus HOM05D002690 ORTHO05D005709 8.1e-36 155.2 160 46.9
THA.LOC104798605 Tarenaya hassleriana HOM05D002690 ORTHO05D005709 8.1e-36 155.2 151 49.0
Ah.14g086150 Amaranthus hybridus HOM05D002690 ORTHO05D005709 1.1e-35 154.8 150 46.7
BcaNung05261 Brassica carinata HOM05D002690 ORTHO05D005709 1.1e-35 154.8 151 50.3
Aqoxy1G01608 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 1.4e-35 154.5 153 48.4
AL1G44410 Arabidopsis lyrata HOM05D002690 ORTHO05D005709 1.4e-35 154.5 150 50.0
Migut.H01337 Erythranthe guttata HOM05D002690 ORTHO05D005709 1.4e-35 154.5 97 63.9
Migut.M01886 Erythranthe guttata HOM05D002690 ORTHO05D005709 1.4e-35 154.5 156 45.5
Thhalv10007064m.g Eutrema salsugineum HOM05D002690 ORTHO05D005709 1.4e-35 154.5 150 50.0
Oeu058474.2 Olea europaea HOM05D002690 ORTHO05D005709 1.8e-35 154.1 97 62.9
Actinidia31389 Actinidia chinensis HOM05D001466 ORTHO05D005709 2.4e-35 153.7 142 50.7
BcaC01g00193 Brassica carinata HOM05D002690 ORTHO05D005709 2.4e-35 153.7 150 50.0
BolC3t19931H Brassica oleracea HOM05D002690 ORTHO05D005709 2.4e-35 153.7 150 50.0
Cfa000832 Carpinus fangiana HOM05D002690 ORTHO05D005709 2.4e-35 153.7 97 61.9
Duzib132G0834 Durio zibethinus HOM05D002690 ORTHO05D005709 2.4e-35 153.7 97 61.9
FAN11G1563 Fragaria x ananassa HOM05D002690 ORTHO05D005709 2.4e-35 153.7 151 47.0
Potri.011G089901 Populus trichocarpa HOM05D002690 ORTHO05D005709 2.4e-35 153.7 97 60.8
Gohir.D12G044500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 3.1e-35 153.3 156 46.8
Gorai.008G046800 Gossypium raimondii HOM05D002690 ORTHO05D005709 3.1e-35 153.3 156 46.8
HanXRQChr15g0480931 Helianthus annuus HOM05D002690 ORTHO05D005709 3.1e-35 153.3 105 59.0
Nitab4.5_0011416g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 3.1e-35 153.3 96 62.5
Prupe.4G089500 Prunus persica HOM05D002690 ORTHO05D005709 3.1e-35 153.3 154 45.5
A08p24440 Brassica napus HOM05D002690 ORTHO05D005709 4.0e-35 152.9 150 50.0
C03p76770 Brassica napus HOM05D002690 ORTHO05D005709 4.0e-35 152.9 150 50.0
BraA08t34399Z Brassica rapa HOM05D002690 ORTHO05D005709 4.0e-35 152.9 150 50.0
CiPaw.10G086100 Carya illinoinensis HOM05D002690 ORTHO05D005709 4.0e-35 152.9 105 60.0
Dinv15926 Davidia involucrata HOM05D002690 ORTHO05D005709 4.0e-35 152.9 150 47.3
FvH4_3g09980 Fragaria vesca HOM05D002690 ORTHO05D005709 4.0e-35 152.9 151 47.0
MSTRG.16286 Avicennia marina HOM05D002690 ORTHO05D005709 5.3e-35 152.5 97 61.9
EL10Ac8g19577 Beta vulgaris HOM05D002690 ORTHO05D005709 5.3e-35 152.5 146 48.6
ClCG03G006290 Citrullus lanatus HOM05D002690 ORTHO05D005709 5.3e-35 152.5 158 46.8
COL.COLO4_17684 Corchorus olitorius HOM05D002690 ORTHO05D005709 5.3e-35 152.5 97 61.9
FAN25G1940 Fragaria x ananassa HOM05D002690 ORTHO05D005709 5.3e-35 152.5 152 47.4
Sabra16G0235600 Salix brachista HOM05D002690 ORTHO05D005709 5.3e-35 152.5 106 58.5
Carub.0001s2865 Capsella rubella HOM05D002690 ORTHO05D005709 6.9e-35 152.1 156 49.4
CiPaw.09G115900 Carya illinoinensis HOM05D002690 ORTHO05D005709 6.9e-35 152.1 160 46.2
Eucgr.E02496 Eucalyptus grandis HOM05D002690 ORTHO05D005709 6.9e-35 152.1 97 61.9
FAN16G3174 Fragaria x ananassa HOM05D002690 ORTHO05D005709 6.9e-35 152.1 152 47.4
Lj6g0003051 Lotus japonicus HOM05D002690 ORTHO05D005709 6.9e-35 152.1 156 46.8
Manes.06G055600 Manihot esculenta HOM05D002690 ORTHO05D005709 6.9e-35 152.1 111 56.8
Manes.14G122500 Manihot esculenta HOM05D002690 ORTHO05D005709 6.9e-35 152.1 101 59.4
Potri.001G357800 Populus trichocarpa HOM05D002690 ORTHO05D005709 6.9e-35 152.1 97 60.8
SGA_v2.0_scaffold51G18649 Striga asiatica HOM05D002690 ORTHO05D005709 6.9e-35 152.1 110 55.5
CSS0024768 Camellia sinensis var. sinensis HOM05D002690 ORTHO05D005709 9.0e-35 151.8 97 60.8
FAN21G3939 Fragaria x ananassa HOM05D002690 ORTHO05D005709 9.0e-35 151.8 151 46.4
Gohir.A12G045500 Gossypium hirsutum HOM05D002690 ORTHO05D005709 9.0e-35 151.8 156 46.2
TWI09G1166 Tripterygium wilfordii HOM05D002690 ORTHO05D005709 9.0e-35 151.8 96 61.5
AUR62042032 Chenopodium quinoa HOM05D002690 ORTHO05D005709 1.2e-34 151.4 149 46.3
ECA236G0560 Erigeron canadensis HOM05D002690 ORTHO05D005709 1.2e-34 151.4 97 60.8
PGR031G1950 Punica granatum HOM05D002690 ORTHO05D005709 1.2e-34 151.4 97 60.8
QL05p053241 Quercus lobata HOM05D002690 ORTHO05D005709 1.2e-34 151.4 99 59.6
Rhsim13G0120100 Rhododendron simsii HOM05D002690 ORTHO05D005709 1.2e-34 151.4 97 60.8
Sp1g26280 Schrenkiella parvula HOM05D002690 ORTHO05D005709 1.2e-34 151.4 150 49.3
PGSC0003DMG400021104 Solanum tuberosum HOM05D002690 ORTHO05D005709 1.2e-34 151.4 96 60.4
vmacro03397 Vaccinium macrocarpon HOM05D002690 ORTHO05D005709 1.2e-34 151.4 97 60.8
Nitab4.5_0001181g0060 Nicotiana tabacum HOM05D002690 ORTHO05D005709 1.5e-34 151.0 171 40.9
SEGI_22079 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 1.5e-34 151.0 101 58.4
VMungo0540G2147 Vigna mungo HOM05D002690 ORTHO05D005709 1.5e-34 151.0 158 48.1
DCAR_007847 Daucus carota HOM05D002690 ORTHO05D005709 2.0e-34 150.6 97 60.8
Nitab4.5_0000607g0100 Nicotiana tabacum HOM05D002690 ORTHO05D005709 2.0e-34 150.6 172 40.7
MELO3C002805.2 Cucumis melo HOM05D002690 ORTHO05D005709 2.6e-34 150.2 96 61.5
ECA234G2820 Erigeron canadensis HOM05D002690 ORTHO05D005709 2.6e-34 150.2 97 59.8
TAR626G1080 Trochodendron aralioides HOM05D002690 ORTHO05D005709 2.6e-34 150.2 181 43.6
ATR0165G057 Amborella trichopoda HOM05D002690 ORTHO05D005709 3.4e-34 149.8 145 49.0
arahy.Tifrunner.gnm1.ann1.9EB9RH Arachis hypogaea HOM05D002690 ORTHO05D005709 3.4e-34 149.8 103 59.2
arahy.Tifrunner.gnm1.ann1.XVC3D4 Arachis hypogaea HOM05D002690 ORTHO05D005709 3.4e-34 149.8 103 59.2
CANSAT35G0839 Cannabis sativa HOM05D002690 ORTHO05D005709 3.4e-34 149.8 108 56.5
Lalb_Chr18g0057871 Lupinus albus HOM05D002690 ORTHO05D005709 3.4e-34 149.8 162 45.1
MBI18_g10583_MAGBIO Magnolia biondii HOM05D002690 ORTHO05D005709 3.4e-34 149.8 130 51.5
SalBow7G2713 Salvia bowleyana HOM05D002690 ORTHO05D005709 3.4e-34 149.8 96 60.4
Thecc.02G012500 Theobroma cacao HOM05D002690 ORTHO05D005709 3.4e-34 149.8 97 60.8
Medtr2g029540 Medicago truncatula HOM05D002690 ORTHO05D005709 4.5e-34 149.4 155 45.8
HPP92_016574 Vanilla planifolia HOM05D002690 ORTHO05D005709 4.5e-34 149.4 152 46.7
AagrBONN_evm.TU.Sc2ySwM_228.4357 Anthoceros agrestis HOM05D002690 ORTHO05D005709 5.8e-34 149.1 244 36.9
Solyc02g070240.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 5.8e-34 149.1 96 58.3
CsaV3_5G039520 Cucumis sativus L. HOM05D002690 ORTHO05D005709 7.6e-34 148.7 161 46.0
DCAR_003862 Daucus carota HOM05D002690 ORTHO05D005709 7.6e-34 148.7 107 57.0
Nitab4.5_0000100g0020 Nicotiana tabacum HOM05D002690 ORTHO05D005709 7.6e-34 148.7 138 45.7
Sopen02g019330 Solanum pennellii HOM05D002690 ORTHO05D005709 7.6e-34 148.7 150 46.7
TAR627G0656 Trochodendron aralioides HOM05D002690 ORTHO05D005709 7.6e-34 148.7 128 52.3
unitig_61.g26082 Utricularia gibba HOM05D002690 ORTHO05D005709 7.6e-34 148.7 97 59.8
Psat1g168520 Pisum sativum HOM05D002690 ORTHO05D005709 9.9e-34 148.3 185 42.2
Hund26562 Selenicereus undatus HOM05D002690 ORTHO05D005709 9.9e-34 148.3 149 46.3
MELO3C022129.2 Cucumis melo HOM05D002690 ORTHO05D005709 1.3e-33 147.9 160 45.6
ClCG08G001630 Citrullus lanatus HOM05D002690 ORTHO05D005709 1.7e-33 147.5 160 45.6
Sed0021012 Sechium edule HOM05D002690 ORTHO05D005709 2.2e-33 147.1 100 60.0
Sed0027591 Sechium edule HOM05D002690 ORTHO05D005709 2.2e-33 147.1 107 57.0
Sopen02g006300 Solanum pennellii HOM05D002690 ORTHO05D005709 2.2e-33 147.1 191 39.8
Nn3g20245 Nelumbo nucifera HOM05D002690 ORTHO05D005709 2.9e-33 146.7 152 46.7
Solyc02g021760.3 Solanum lycopersicum HOM05D002690 ORTHO05D005709 2.9e-33 146.7 191 39.8
A07p09930 Brassica napus HOM05D002690 ORTHO05D005709 3.8e-33 146.4 150 47.3
HPP92_015677 Vanilla planifolia HOM05D002690 ORTHO05D005709 3.8e-33 146.4 137 49.6
Cpa.g.sc17.104 Carica papaya HOM05D002690 ORTHO05D005709 4.9e-33 146.0 97 58.8
Sc24g0001450 Simmondsia chinensis HOM05D002690 ORTHO05D005709 2.4e-32 143.7 96 57.3
Lj2C328G3 Lonicera japonica HOM05D002690 ORTHO05D005709 7.1e-32 142.1 97 56.7
Sabra11G0073400 Salix brachista HOM05D002690 ORTHO05D005709 7.1e-32 142.1 91 60.4
C07p15130 Brassica napus HOM05D002690 ORTHO05D005709 1.2e-31 141.4 150 46.7
CARHR029850 Cardamine hirsuta HOM05D002690 ORTHO05D005709 1.6e-31 141.0 151 45.7
TPR.G30088 Trifolium pratense HOM05D002690 ORTHO05D005709 2.1e-31 140.6 135 45.9
MCO01G443 Micromonas commoda HOM05D002690 ORTHO05D005709 8.7e-30 135.2 107 51.4
Haze_05773 Corylus avellana HOM05D002690 ORTHO05D005709 8.1e-28 128.6 212 35.4
Actinidia32368 Actinidia chinensis HOM05D002690 ORTHO05D005709 1.7e-25 120.9 79 60.8
Zm00001eb224690 Zea mays HOM05D002690 ORTHO05D005709 2.9e-25 120.2 94 52.1
Zm00001eb273850 Zea mays HOM05D002690 ORTHO05D005709 2.9e-25 120.2 94 52.1
CAN.G660.45 Capsicum annuum HOM05D002690 ORTHO05D005709 6.4e-25 119.0 79 58.2
Os06g0677700 Oryza sativa ssp. japonica HOM05D002690 ORTHO05D005709 8.4e-25 118.6 94 52.1
CsaV3_1G037380 Cucumis sativus L. HOM05D002690 ORTHO05D005709 3.2e-24 116.7 79 58.2
GSVIVG01021617001 Vitis vinifera HOM05D002690 ORTHO05D005709 5.5e-24 115.9 79 57.0
PRCOL_00006800 Prasinoderma coloniale HOM05D002690 ORTHO05D005709 1.3e-20 104.8 242 33.5
Ca_00801_v3 Cicer arietinum L. HOM05D002690 ORTHO05D005709 2.8e-20 103.6 186 36.0
RcHm_v2.0_Chr5g0015731 Rosa chinensis HOM05D002690 ORTHO05D005709 8.2e-20 102.1 120 44.2
Peaxi162Scf00155g00068 Petunia axillaris HOM05D002690 ORTHO05D005709 4.0e-19 99.8 96 46.9
Aqoxy1G01609 Aquilegia oxysepala HOM05D002690 ORTHO05D005709 1.9e-16 90.9 104 40.4
SEGI_04190 Sequoiadendron giganteum HOM05D002690 ORTHO05D005709 5.7e-13 79.3 53 58.5
BolC7t42017H Brassica oleracea HOM05D002690 ORTHO05D005709 6.3e-12 75.9 52 55.8
Cfa024412 Carpinus fangiana HOM05D000237 ORTHO05D006530 6.5e-09 65.9 79 35.4
RcHm_v2.0_Chr5g0015771 Rosa chinensis HOM05D004072 ORTHO05D005933 2.5e-08 63.9 97 37.1
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 2.3e-06 57.4 110 31.8
unitig_0.g927 Utricularia gibba HOM05D002690 ORTHO05D005709 5.1e-06 56.2 31 67.7


User provided reference genes

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