Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00000031 Prasinoderma coloniale HOM05D000526 ORTHO05D007120 0.0e+00 1819.3 1013 100.0
Mapoly0007s0211 Marchantia polymorpha HOM05D000526 ORTHO05D007120 5.6e-62 243.8 757 31.8
Sed0025599 Sechium edule HOM05D000526 ORTHO05D007120 1.8e-60 238.8 751 30.2
QL08p059462 Quercus lobata HOM05D000526 ORTHO05D007120 2.0e-59 235.3 724 29.7
CANSAT56G4122 Cannabis sativa HOM05D000526 ORTHO05D007120 7.6e-59 233.4 750 29.5
Pp3c6_16050 Physcomitrium patens HOM05D000526 ORTHO05D007120 1.7e-58 232.3 754 29.7
CsaV3_5G008190 Cucumis sativus L. HOM05D000526 ORTHO05D007120 2.2e-58 231.9 751 30.0
TWI38G2252 Tripterygium wilfordii HOM05D000526 ORTHO05D007120 2.9e-58 231.5 731 30.1
CiPaw.02G185300 Carya illinoinensis HOM05D000526 ORTHO05D007120 8.4e-58 229.9 714 29.7
VMungo1383G2027 Vigna mungo HOM05D000526 ORTHO05D007120 1.1e-57 229.6 725 29.5
Cc02_g07620 Coffea canephora HOM05D000526 ORTHO05D007120 1.4e-57 229.2 715 32.4
MD01G1136100 Malus domestica HOM05D000526 ORTHO05D007120 5.5e-57 227.3 751 29.6
Thecc.10G036600 Theobroma cacao HOM05D000526 ORTHO05D007120 5.5e-57 227.3 751 29.7
Atru.chr12.420 Acer truncatum HOM05D000526 ORTHO05D007120 1.2e-56 226.1 751 29.8
Carub.0003s1174 Capsella rubella HOM05D000526 ORTHO05D007120 3.5e-56 224.6 751 30.2
Cfa001454 Carpinus fangiana HOM05D000526 ORTHO05D007120 3.5e-56 224.6 725 30.9
Lsat_1_v5_gn_9_64841 Lactuca sativa HOM05D000526 ORTHO05D007120 3.5e-56 224.6 759 28.7
Prupe.2G237600 Prunus persica HOM05D000526 ORTHO05D007120 4.6e-56 224.2 750 29.3
Psat5g122760 Pisum sativum HOM05D000526 ORTHO05D007120 6.0e-56 223.8 726 32.1
Zm00001eb335830 Zea mays HOM05D000526 ORTHO05D007120 7.9e-56 223.4 749 30.7
CiPaw.01G289200 Carya illinoinensis HOM05D000526 ORTHO05D007120 1.0e-55 223.0 726 30.0
arahy.Tifrunner.gnm1.ann1.XJTD17 Arachis hypogaea HOM05D000526 ORTHO05D007120 1.3e-55 222.6 713 29.2
A05p37020 Brassica napus HOM05D000526 ORTHO05D007120 1.8e-55 222.2 755 29.9
Sp3g10570 Schrenkiella parvula HOM05D000526 ORTHO05D007120 1.8e-55 222.2 754 29.8
BraA05t22499Z Brassica rapa HOM05D000526 ORTHO05D007120 3.0e-55 221.5 755 29.9
CAN.G19.2 Capsicum annuum HOM05D000526 ORTHO05D007120 3.0e-55 221.5 715 32.0
Duzib114G0716 Durio zibethinus HOM05D000526 ORTHO05D007120 3.0e-55 221.5 751 30.5
arahy.Tifrunner.gnm1.ann1.4S5IKD Arachis hypogaea HOM05D000526 ORTHO05D007120 3.9e-55 221.1 713 30.6
AT3G12380 Arabidopsis thaliana HOM05D000526 ORTHO05D007120 8.7e-55 219.9 751 30.2
HPP92_006625 Vanilla planifolia HOM05D000526 ORTHO05D007120 8.7e-55 219.9 725 29.4
Haze_17087 Corylus avellana HOM05D000526 ORTHO05D007120 1.1e-54 219.5 747 30.4
MELO3C023870.2 Cucumis melo HOM05D000526 ORTHO05D007120 1.1e-54 219.5 781 28.6
Phvul.001G232900 Phaseolus vulgaris HOM05D000526 ORTHO05D007120 1.1e-54 219.5 723 31.4
Glyma.02G248700 Glycine max HOM05D000526 ORTHO05D007120 1.5e-54 219.2 726 30.6
Ciclev10030819m.g Citrus clementina HOM05D000526 ORTHO05D007120 1.9e-54 218.8 751 30.5
GSVIVG01016517001 Vitis vinifera HOM05D000526 ORTHO05D007120 3.3e-54 218.0 727 30.5
Aqoxy2G02264 Aquilegia oxysepala HOM05D000526 ORTHO05D007120 4.3e-54 217.6 753 29.2
CARHR086900 Cardamine hirsuta HOM05D000526 ORTHO05D007120 4.3e-54 217.6 755 30.2
Medtr3g067945 Medicago truncatula HOM05D000526 ORTHO05D007120 4.3e-54 217.6 728 31.5
Potri.010G202000 Populus trichocarpa HOM05D000526 ORTHO05D007120 4.3e-54 217.6 713 29.3
SMO332G0005 Selaginella moellendorffii HOM05D000526 ORTHO05D007120 4.3e-54 217.6 769 29.5
Thhalv10020154m.g Eutrema salsugineum HOM05D000526 ORTHO05D007120 5.6e-54 217.2 751 29.3
Lj6g0027283 Lotus japonicus HOM05D000526 ORTHO05D007120 5.6e-54 217.2 726 28.7
TAR636G2235 Trochodendron aralioides HOM05D000526 ORTHO05D007120 5.6e-54 217.2 726 28.5
C05p55450 Brassica napus HOM05D000526 ORTHO05D007120 7.4e-54 216.9 754 30.1
COL.COLO4_15082 Corchorus olitorius HOM05D000526 ORTHO05D007120 9.6e-54 216.5 751 30.9
Glyma.18G037700 Glycine max HOM05D000526 ORTHO05D007120 9.6e-54 216.5 725 29.5
Gorai.011G266400 Gossypium raimondii HOM05D000526 ORTHO05D007120 9.6e-54 216.5 752 29.4
MBI14_g04663_MAGBIO Magnolia biondii HOM05D000526 ORTHO05D007120 9.6e-54 216.5 733 30.6
BolC5t34211H Brassica oleracea HOM05D000526 ORTHO05D007120 1.6e-53 215.7 754 29.8
Manes.10G029000 Manihot esculenta HOM05D000526 ORTHO05D007120 1.6e-53 215.7 715 28.7
Sc10g0001690 Simmondsia chinensis HOM05D000526 ORTHO05D007120 1.6e-53 215.7 730 30.3
VMungo0647G0157 Vigna mungo HOM05D000526 ORTHO05D007120 2.1e-53 215.3 727 28.7
Gohir.A10G220800 Gossypium hirsutum HOM05D000526 ORTHO05D007120 2.8e-53 214.9 751 29.0
Actinidia02937 Actinidia chinensis HOM05D000526 ORTHO05D007120 3.7e-53 214.5 726 30.9
Gorai.009G319700 Gossypium raimondii HOM05D000526 ORTHO05D007120 3.7e-53 214.5 750 29.9
AL3G24030 Arabidopsis lyrata HOM05D000526 ORTHO05D007120 4.8e-53 214.2 753 29.3
HanXRQChr09g0249981 Helianthus annuus HOM05D000526 ORTHO05D007120 8.2e-53 213.4 752 29.7
ECA232G2486 Erigeron canadensis HOM05D000526 ORTHO05D007120 1.4e-52 212.6 752 28.6
PSO513G0165 Papaver somniferum HOM05D000526 ORTHO05D007120 1.4e-52 212.6 726 28.1
Sopen06g013630 Solanum pennellii HOM05D000526 ORTHO05D007120 1.4e-52 212.6 717 30.5
Migut.F00766 Erythranthe guttata HOM05D000526 ORTHO05D007120 1.8e-52 212.2 743 28.8
Eucgr.J01241 Eucalyptus grandis HOM05D000526 ORTHO05D007120 2.4e-52 211.8 754 29.2
Aa31sc922G10 Aethionema arabicum HOM05D000526 ORTHO05D007120 3.1e-52 211.5 752 30.2
PSO339G0547 Papaver somniferum HOM05D000526 ORTHO05D007120 3.1e-52 211.5 726 28.4
AagrBONN_evm.TU.Sc2ySwM_368.1404 Anthoceros agrestis HOM05D000526 ORTHO05D007120 9.0e-52 209.9 778 28.9
ClCG07G003450 Citrullus lanatus HOM05D000526 ORTHO05D007120 9.0e-52 209.9 812 28.1
Lalb_Chr04g0251161 Lupinus albus HOM05D000526 ORTHO05D007120 1.2e-51 209.5 751 31.3
PGR044G2341 Punica granatum HOM05D000526 ORTHO05D007120 1.5e-51 209.1 750 29.3
TAR633G1032 Trochodendron aralioides HOM05D000526 ORTHO05D007120 1.5e-51 209.1 727 27.8
Solyc06g043170.4 Solanum lycopersicum HOM05D000526 ORTHO05D007120 5.8e-51 207.2 717 30.4
RcHm_v2.0_Chr1g0367891 Rosa chinensis HOM05D000526 ORTHO05D007120 7.6e-51 206.8 750 28.0
Gohir.A05G302000 Gossypium hirsutum HOM05D000526 ORTHO05D007120 1.0e-50 206.5 750 29.9
Gohir.D05G301600 Gossypium hirsutum HOM05D000526 ORTHO05D007120 1.7e-50 205.7 750 28.0
Phvul.008G232000 Phaseolus vulgaris HOM05D000526 ORTHO05D007120 2.2e-50 205.3 727 27.8
CSS0032139 Camellia sinensis var. sinensis HOM05D000526 ORTHO05D007120 2.9e-50 204.9 752 30.2
Hma1.2p1_1785F.1_g302230 Hydrangea macrophylla HOM05D000526 ORTHO05D007120 4.9e-50 204.1 729 30.3
THA.LOC104799335 Tarenaya hassleriana HOM05D000526 ORTHO05D007120 8.4e-50 203.4 731 28.5
Glyma.11G219700 Glycine max HOM05D000526 ORTHO05D007120 4.2e-49 201.1 725 30.1
FAN06G3330 Fragaria x ananassa HOM05D000526 ORTHO05D007120 7.1e-49 200.3 750 29.3
FvH4_7g22790 Fragaria vesca HOM05D000526 ORTHO05D007120 9.3e-49 199.9 750 29.3
FAN01G3146 Fragaria x ananassa HOM05D000526 ORTHO05D007120 9.3e-49 199.9 750 29.3
FAN06G4626 Fragaria x ananassa HOM05D000526 ORTHO05D007120 2.1e-48 198.7 750 29.3
unitig_0.g2789 Utricularia gibba HOM05D000526 ORTHO05D007120 2.1e-48 198.7 731 29.4
Rhsim10G0146500 Rhododendron simsii HOM05D000526 ORTHO05D007120 1.0e-47 196.4 657 30.9
Peaxi162Scf00658g00847 Petunia axillaris HOM05D000526 ORTHO05D007120 1.3e-47 196.1 704 31.0
Gohir.D10G233000 Gossypium hirsutum HOM05D000526 ORTHO05D007120 1.8e-47 195.7 629 29.7
Nn2g11155 Nelumbo nucifera HOM05D000526 ORTHO05D007120 1.8e-47 195.7 675 30.8
FAN01G0881 Fragaria x ananassa HOM05D000526 ORTHO05D007120 3.0e-47 194.9 750 29.2
Os01g0144340 Oryza sativa ssp. japonica HOM05D000526 ORTHO05D007120 5.1e-47 194.1 770 31.0
AUR62012112 Chenopodium quinoa HOM05D000526 ORTHO05D007120 8.7e-47 193.4 626 31.6
Oeu016536.1 Olea europaea HOM05D000526 ORTHO05D007120 4.3e-46 191.0 731 28.9
MSTRG.8990 Avicennia marina HOM05D000526 ORTHO05D007120 7.4e-46 190.3 726 29.1
FAN10G2071 Fragaria x ananassa HOM05D000526 ORTHO05D007120 4.8e-45 187.6 750 28.9
FAN03G0724 Fragaria x ananassa HOM05D000526 ORTHO05D007120 4.5e-43 181.0 750 28.7
CDE04G2375 Ceratophyllum demersum HOM05D000526 ORTHO05D007120 5.9e-43 180.6 629 29.9
Sabra10G0155900 Salix brachista HOM05D000526 ORTHO05D007120 1.0e-42 179.9 719 27.1
SEGI_22941 Sequoiadendron giganteum HOM05D000526 ORTHO05D007120 5.5e-41 174.1 442 34.8
SGA_v2.0_scaffold2G01040 Striga asiatica HOM05D000526 ORTHO05D007120 2.1e-40 172.2 731 29.1
EL10Ac2g04728 Beta vulgaris HOM05D000526 ORTHO05D007120 1.3e-39 169.5 583 27.8
Dinv03706 Davidia involucrata HOM05D000526 ORTHO05D007120 7.4e-38 163.7 584 28.4
CBR_g32029 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-38 163.3 461 33.2
Rhsim10G0147100 Rhododendron simsii HOM05D000526 ORTHO05D007120 1.8e-36 159.1 437 34.6
Rhsim04G0164300 Rhododendron simsii HOM05D000526 ORTHO05D007120 2.4e-36 158.7 437 34.6
TPR.G15834 Trifolium pratense HOM05D000526 ORTHO05D007120 2.4e-36 158.7 442 34.8
Lj1C939G9 Lonicera japonica HOM05D000526 ORTHO05D007120 4.1e-36 157.9 629 26.7
AUR62039359 Chenopodium quinoa HOM05D000526 ORTHO05D007120 1.2e-35 156.4 625 29.8
Ah.10g036880 Amaranthus hybridus HOM05D000526 ORTHO05D007120 4.5e-35 154.5 561 30.5
BcaC05g29266 Brassica carinata HOM05D000526 ORTHO05D007120 1.6e-32 146.0 751 25.8
Cpa.g.sc1.425 Carica papaya HOM05D000526 ORTHO05D007120 9.7e-30 136.7 407 30.7
Glyma.14G067800 Glycine max HOM05D000526 ORTHO05D007120 2.3e-15 89.0 444 24.3
Migut.F00773 Erythranthe guttata HOM05D000526 ORTHO05D007120 9.7e-14 83.6 358 26.5
TPR.G15847 Trifolium pratense HOM05D000526 ORTHO05D007120 4.5e-11 74.7 183 31.1
SEGI_26540 Sequoiadendron giganteum HOM05D000526 ORTHO05D007120 1.5e-09 69.7 198 28.3
Peaxi162Scf00685g00016 Petunia axillaris HOM05D000526 ORTHO05D007120 8.8e-07 60.5 198 29.8
PRCOL_00005532 Prasinoderma coloniale HOM05D000173 ORTHO05D008065 3.4e-06 58.5 121 38.0
MD07G1200900 Malus domestica HOM05D000526 ORTHO05D007120 5.7e-06 57.8 234 28.2
DCAR_027605 Daucus carota HOM05D000526 ORTHO05D007120 7.5e-06 57.4 192 28.6


User provided reference genes

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