Gene: SGA_v2.0_scaffold2G01040
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold2G01040
- Transcript Identifier SGA_v2.0_scaffold2T01040
- Gene Type Coding gene
- Location scaffold2 : 2389872-2398037 : positive
Gene Family Information
- ID HOM05D000526
- #Genes/#Species 1037/100
- Phylogenetic origin
- ID ORTHO05D007120
- #Genes/#Species 134/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- product Actin/actin-like family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT3G12380 |
| GO:0030029 | ISO | PLAZA Integrative Orthology | actin filament-based process | AT3G12380 |
| GO:0010082 | ISO | PLAZA Integrative Orthology | regulation of root meristem growth | AT3G12380 |
| GO:0007275 | ISO | PLAZA Integrative Orthology | multicellular organism development | AT3G12380 |
| GO:0080036 | ISO | PLAZA Integrative Orthology | regulation of cytokinin-activated signaling pathway | AT3G12380 |
| GO:1904668 | ISO | PLAZA Homology (enrichment) | positive regulation of ubiquitin protein ligase activity | HOM05D000526 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000526 |
| GO:0097027 | ISO | PLAZA Homology (enrichment) | ubiquitin-protein transferase activator activity | HOM05D000526 |
| GO:0010997 | ISO | PLAZA Homology (enrichment) | anaphase-promoting complex binding | HOM05D000526 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G12380 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT3G12380 |
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT3G12380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 12.4.3.2 | Chromatin organisation.nucleosome remodeling.INO80 chromatin remodeling complex.component ARP5 |