Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGSC0003DMG403030108 Solanum tuberosum HOM05D004178 ORTHO05D005204 3.5e-86 321.6 169 100.0
Sopen05g030150 Solanum pennellii HOM05D004178 ORTHO05D005204 4.4e-60 235.0 138 89.9
Solyc05g051680.4 Solanum lycopersicum HOM05D004178 ORTHO05D005204 1.3e-59 233.4 138 89.1
Nitab4.5_0003647g0020 Nicotiana tabacum HOM05D004178 ORTHO05D005204 2.9e-56 222.2 138 87.0
Nitab4.5_0000818g0230 Nicotiana tabacum HOM05D004178 ORTHO05D005204 9.4e-55 217.2 138 84.8
Peaxi162Scf00167g00610 Petunia axillaris HOM05D004178 ORTHO05D005204 4.8e-51 204.9 138 79.0
Actinidia13583 Actinidia chinensis HOM05D004178 ORTHO05D005204 8.0e-30 134.4 137 51.8
Lj1C978G4 Lonicera japonica HOM05D004178 ORTHO05D005204 1.4e-29 133.7 137 51.1
Migut.F00486 Erythranthe guttata HOM05D004178 ORTHO05D005204 8.9e-29 131.0 137 51.8
MELO3C017663.2 Cucumis melo HOM05D004178 ORTHO05D005204 2.0e-28 129.8 138 50.7
ClCG07G016820 Citrullus lanatus HOM05D004178 ORTHO05D005204 3.4e-28 129.0 138 50.0
CsaV3_4G004020 Cucumis sativus L. HOM05D004178 ORTHO05D005204 3.4e-28 129.0 138 50.7
Rhsim03G0166000 Rhododendron simsii HOM05D004178 ORTHO05D005204 4.4e-28 128.6 139 48.9
Sed0013674 Sechium edule HOM05D004178 ORTHO05D005204 7.5e-28 127.9 138 49.3
Lsat_1_v5_gn_9_51940 Lactuca sativa HOM05D004178 ORTHO05D005204 4.9e-27 125.2 139 48.2
CiPaw.03G020700 Carya illinoinensis HOM05D004178 ORTHO05D005204 1.4e-26 123.6 137 47.4
TAR375G0252 Trochodendron aralioides HOM05D004178 ORTHO05D005204 1.4e-26 123.6 137 49.6
Cc02_g04400 Coffea canephora HOM05D004178 ORTHO05D005204 7.0e-26 121.3 137 46.0
vmacro06815 Vaccinium macrocarpon HOM05D004178 ORTHO05D005204 1.6e-25 120.2 137 46.0
DCAR_014619 Daucus carota HOM05D004178 ORTHO05D005204 4.6e-25 118.6 137 47.4
Nn6g33950 Nelumbo nucifera HOM05D004178 ORTHO05D005204 7.8e-25 117.9 137 46.7
CANSAT56G2947 Cannabis sativa HOM05D004178 ORTHO05D005204 1.3e-24 117.1 136 44.9
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 2.3e-24 116.3 136 47.8
Dinv06570 Davidia involucrata HOM05D004178 ORTHO05D005204 3.9e-24 115.5 137 48.2
SalBow5G4122 Salvia bowleyana HOM05D004178 ORTHO05D005204 5.0e-24 115.2 137 47.4
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 6.6e-24 114.8 138 48.6
Manes.06G133600 Manihot esculenta HOM05D004178 ORTHO05D005204 1.1e-23 114.0 137 47.4
Aqoxy5G03870 Aquilegia oxysepala HOM05D004178 ORTHO05D005204 3.3e-23 112.5 134 47.8
Ciclev10004204m.g Citrus clementina HOM05D004178 ORTHO05D005204 6.2e-22 108.2 137 44.5
unitig_37.g12493 Utricularia gibba HOM05D004178 ORTHO05D005204 6.2e-22 108.2 137 42.3
Eucgr.A02900 Eucalyptus grandis HOM05D004178 ORTHO05D005204 4.0e-21 105.5 137 43.8
MD07G1252300 Malus domestica HOM05D004178 ORTHO05D005204 4.0e-21 105.5 137 43.1
Aa31LG11G1940 Aethionema arabicum HOM05D004178 ORTHO05D005204 1.5e-20 103.6 134 46.3
ECA232G0935 Erigeron canadensis HOM05D004178 ORTHO05D005204 2.6e-20 102.8 136 42.6
A03p47060 Brassica napus HOM05D004178 ORTHO05D005204 4.4e-20 102.1 130 45.4
BraA03t13829Z Brassica rapa HOM05D004178 ORTHO05D005204 4.4e-20 102.1 130 45.4
ATR0317G120 Amborella trichopoda HOM05D004178 ORTHO05D005204 5.8e-20 101.7 137 40.1
SGA_v2.0_scaffold2G01219 Striga asiatica HOM05D004178 ORTHO05D005204 5.8e-20 101.7 148 40.5
AT5G07660 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.3e-19 100.5 133 42.1
BcaC06g33151 Brassica carinata HOM05D004178 ORTHO05D005204 1.3e-19 100.5 130 45.4
BcaC06g33236 Brassica carinata HOM05D004178 ORTHO05D005204 1.7e-19 100.1 130 43.8
C07p45140 Brassica napus HOM05D004178 ORTHO05D005204 1.7e-19 100.1 130 43.8
BolC7t45036H Brassica oleracea HOM05D004178 ORTHO05D005204 1.7e-19 100.1 130 43.8
AL8G38150 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 4.9e-19 98.6 133 44.4
FAN01G0652 Fragaria x ananassa HOM05D004178 ORTHO05D005204 4.9e-19 98.6 137 39.4
FAN10G0409 Fragaria x ananassa HOM05D004178 ORTHO05D005204 8.3e-19 97.8 137 39.4
Haze_13892 Corylus avellana HOM05D004178 ORTHO05D005204 1.1e-18 97.4 137 41.6
RcHm_v2.0_Chr1g0374131 Rosa chinensis HOM05D004178 ORTHO05D005204 1.4e-18 97.1 138 38.4
AL6G18000 Arabidopsis lyrata HOM05D004178 ORTHO05D005204 1.9e-18 96.7 136 39.7
PSO063G1916 Papaver somniferum HOM05D004178 ORTHO05D005204 1.9e-18 96.7 136 47.8
MSTRG.8830 Avicennia marina HOM05D004178 ORTHO05D005204 2.4e-18 96.3 115 47.8
Cfa008151 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.1e-18 95.5 137 40.9
Carub.0006s0663 Capsella rubella HOM05D004178 ORTHO05D005204 1.2e-17 94.0 133 39.8
EL10Ac3g05856 Beta vulgaris HOM05D004178 ORTHO05D005204 4.6e-17 92.0 136 37.5
CARHR275220 Cardamine hirsuta HOM05D004178 ORTHO05D005204 7.8e-17 91.3 133 42.1
FvH4_7g27291 Fragaria vesca HOM05D004178 ORTHO05D005204 7.8e-17 91.3 136 38.2
FAN06G0596 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.8e-17 91.3 136 38.2
FAN06G2180 Fragaria x ananassa HOM05D004178 ORTHO05D005204 7.8e-17 91.3 136 38.2
Thhalv10012532m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 1.3e-16 90.5 133 38.3
AUR62015432 Chenopodium quinoa HOM05D004178 ORTHO05D005204 1.7e-16 90.1 136 36.8
GSVIVG01013865001 Vitis vinifera HOM05D004178 ORTHO05D005204 3.0e-16 89.4 137 40.9
Thecc.03G153700 Theobroma cacao HOM05D004178 ORTHO05D005204 3.9e-16 89.0 136 40.4
Carub.0008s2215 Capsella rubella HOM05D004178 ORTHO05D005204 6.6e-16 88.2 133 42.1
AT5G61460 Arabidopsis thaliana HOM05D004178 ORTHO05D005204 1.9e-15 86.7 133 42.1
Thhalv10003566m.g Eutrema salsugineum HOM05D004178 ORTHO05D005204 2.5e-15 86.3 137 40.1
HPP92_022323 Vanilla planifolia HOM05D004178 ORTHO05D005204 2.5e-15 86.3 137 37.2
BcaB05g21602 Brassica carinata HOM05D004178 ORTHO05D005204 3.3e-15 85.9 132 37.1
BraA02t04928Z Brassica rapa HOM05D004178 ORTHO05D005204 5.6e-15 85.1 135 37.0
QL09p005323 Quercus lobata HOM05D004178 ORTHO05D005204 2.8e-14 82.8 134 37.3
Ca_02792_v3 Cicer arietinum L. HOM05D004178 ORTHO05D005204 3.6e-14 82.4 132 40.9
CSS0036077 Camellia sinensis var. sinensis HOM05D004178 ORTHO05D005204 6.2e-14 81.6 137 36.5
Glyma.09G229900 Glycine max HOM05D004178 ORTHO05D005204 8.1e-14 81.3 135 37.8
PSO782G3243 Papaver somniferum HOM05D004178 ORTHO05D005204 1.8e-13 80.1 118 45.8
CDE11G0310 Ceratophyllum demersum HOM05D004178 ORTHO05D005204 6.8e-13 78.2 137 34.3
Phvul.011G007300 Phaseolus vulgaris HOM05D004178 ORTHO05D005204 6.8e-13 78.2 137 37.2
Duzib084G0917 Durio zibethinus HOM05D004178 ORTHO05D005204 1.5e-12 77.0 131 36.6
VMungo1127G0288 Vigna mungo HOM05D004178 ORTHO05D005204 1.5e-12 77.0 137 36.5
arahy.Tifrunner.gnm1.ann1.2YP1UN Arachis hypogaea HOM05D004178 ORTHO05D005204 2.0e-12 76.6 146 34.2
Lalb_Chr19g0140351 Lupinus albus HOM05D004178 ORTHO05D005204 3.4e-12 75.9 134 36.6
Psat7g194520 Pisum sativum HOM05D004178 ORTHO05D005204 3.4e-12 75.9 137 37.2
arahy.Tifrunner.gnm1.ann1.D3FWW6 Arachis hypogaea HOM05D004178 ORTHO05D005204 4.4e-12 75.5 148 33.8
TWI14G1279 Tripterygium wilfordii HOM05D004178 ORTHO05D005204 7.5e-12 74.7 137 32.8
COL.COLO4_14102 Corchorus olitorius HOM05D004178 ORTHO05D005204 1.7e-11 73.6 136 31.6
Medtr4g036760 Medicago truncatula HOM05D004178 ORTHO05D005204 1.7e-11 73.6 137 38.0
Prupe.2G275800 Prunus persica HOM05D004178 ORTHO05D005204 1.7e-11 73.6 136 36.0
HPP92_022331 Vanilla planifolia HOM05D004178 ORTHO05D005204 1.7e-11 73.6 137 32.8
Lj3g0020737 Lotus japonicus HOM05D004178 ORTHO05D005204 6.4e-11 71.6 132 34.8
Medtr4g061050 Medicago truncatula HOM05D004178 ORTHO05D005204 6.4e-11 71.6 137 34.3
AUR62002220 Chenopodium quinoa HOM05D004178 ORTHO05D005204 8.3e-11 71.2 94 41.5
Ah.07g207660 Amaranthus hybridus HOM05D004178 ORTHO05D005204 1.1e-10 70.9 136 31.6
BcaNung06187 Brassica carinata HOM05D004178 ORTHO05D005204 9.2e-10 67.8 106 38.7
FAN10G1085 Fragaria x ananassa HOM05D004178 ORTHO05D005204 1.2e-09 67.4 78 44.9
TPR.G2991 Trifolium pratense HOM05D004178 ORTHO05D005204 1.2e-09 67.4 126 37.3
Sp2g24660 Schrenkiella parvula HOM05D004178 ORTHO05D005204 2.1e-09 66.6 133 36.1
TPR.G3678 Trifolium pratense HOM05D004178 ORTHO05D005204 2.7e-09 66.2 137 32.1
Oeu021707.2 Olea europaea HOM05D004178 ORTHO05D005204 1.0e-08 64.3 55 60.0
C02p03240 Brassica napus HOM05D004178 ORTHO05D005204 1.3e-08 63.9 74 45.9
FAN03G3201 Fragaria x ananassa HOM05D004178 ORTHO05D005204 3.0e-08 62.8 182 28.6
Sabra03G0074500 Salix brachista HOM05D004178 ORTHO05D005204 3.9e-08 62.4 95 43.2
CAN.G515.10 Capsicum annuum HOM05D004178 ORTHO05D005204 5.1e-08 62.0 33 84.8
CiPaw.03G020800 Carya illinoinensis HOM05D000001 ORTHO05D009236 7.3e-07 58.2 94 39.4
Sc19g0002080 Simmondsia chinensis HOM05D004178 ORTHO05D005204 1.6e-06 57.0 122 32.8
FAN03G2333 Fragaria x ananassa HOM05D004178 ORTHO05D005204 8.1e-06 54.7 139 33.1


User provided reference genes

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