Gene: Carub.0002s2057
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s2057
- Transcript Identifier Carub.0002s2057.1
- Gene Type Coding gene
- Location scaffold_2 : 11330611-11332071 : negative
Gene Family Information
- ID HOM05D005418
- #Genes/#Species 141/99
- Phylogenetic origin
- ID ORTHO05D006724
- #Genes/#Species 139/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0002s2057.v1.1
- pacid 39243772
- synonym Carubv10020945m.g
Descriptions
- Description K15544 - RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (SSU72)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | InterPro | mRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004721 | IEA | InterPro | phosphoprotein phosphatase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G73820 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G73820 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006811 | RNA polymerase II subunit A |
| Mapman id | Description |
|---|---|
| 16.3.1.2.10 | RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.phosphatase component Ssu72 |
| 18.4.24.3 | Protein modification.phosphorylation.protein tyrosine phosphatase (PTP) superfamily.PTP phosphatase (SSU72) |