Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 1.0e-114 416.8 209 100.0
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 5.6e-73 278.1 261 62.1
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 8.3e-61 237.7 250 57.6
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.1e-47 194.1 267 47.2
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 5.1e-42 175.3 137 67.2
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 6.6e-42 174.9 264 43.9
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 4.3e-41 172.2 260 44.2
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 2.8e-40 169.5 260 43.8
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 2.8e-40 169.5 265 43.8
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 4.8e-40 168.7 252 45.6
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 6.2e-40 168.3 262 43.5
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 6.2e-40 168.3 262 43.5
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 8.1e-40 167.9 259 42.1
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 8.1e-40 167.9 267 41.6
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 1.4e-39 167.2 262 42.0
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 1.4e-39 167.2 262 42.0
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 5.3e-39 165.2 260 41.2
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 5.3e-39 165.2 260 44.6
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 9.0e-39 164.5 260 41.5
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 2.6e-38 162.9 257 42.0
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 2.6e-38 162.9 261 45.2
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 7.6e-38 161.4 262 43.1
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.3e-37 160.6 264 42.4
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 1.7e-37 160.2 261 40.6
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 2.2e-37 159.8 251 43.0
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 2.2e-37 159.8 261 40.6
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 3.8e-37 159.1 256 42.2
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 6.4e-37 158.3 265 41.9
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 1.1e-36 157.5 230 42.6
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 1.4e-36 157.1 263 39.2
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 3.2e-36 156.0 269 41.6
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 3.2e-36 156.0 275 38.5
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.2e-36 155.6 259 40.2
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 2.1e-35 153.3 239 43.1
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-35 153.3 259 40.5
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 2.1e-35 153.3 259 40.5
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 2.7e-35 152.9 259 40.2
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 2.7e-35 152.9 263 38.8
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.7e-35 152.9 260 40.0
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 3.5e-35 152.5 260 40.0
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 6.0e-35 151.8 263 41.1
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 6.0e-35 151.8 231 43.3
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 2.3e-34 149.8 259 40.9
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 5.1e-34 148.7 256 39.5
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 5.1e-34 148.7 287 35.5
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 1.5e-33 147.1 260 40.0
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 1.9e-33 146.7 223 43.9
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.9e-33 146.7 258 39.5
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 1.9e-33 146.7 255 41.2
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.3e-33 145.6 232 40.9
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 4.3e-33 145.6 264 36.7
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 4.3e-33 145.6 258 39.5
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 4.8e-32 142.1 287 35.5
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 4.8e-32 142.1 259 39.4
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 8.1e-32 141.4 259 36.7
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.1e-31 141.0 238 39.9
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-31 141.0 261 39.8
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.4e-31 140.6 236 40.3
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 1.4e-31 140.6 139 55.4
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 3.1e-31 139.4 261 39.1
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 3.1e-31 139.4 232 39.2
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 4.0e-31 139.0 261 38.7
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.5e-30 137.1 203 42.4
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 2.6e-30 136.3 354 31.6
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 4.5e-30 135.6 228 39.9
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 5.8e-30 135.2 228 39.0
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 5.8e-30 135.2 256 37.5
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 5.8e-30 135.2 253 39.5
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 7.6e-30 134.8 254 38.2
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 7.6e-30 134.8 258 38.4
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 9.9e-30 134.4 260 38.8
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 9.9e-30 134.4 261 38.7
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 9.9e-30 134.4 232 38.4
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 1.7e-29 133.7 307 35.5
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 2.2e-29 133.3 255 38.0
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.2e-29 133.3 258 38.4
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.2e-29 133.3 259 38.2
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 2.9e-29 132.9 253 36.4
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 2.9e-29 132.9 269 35.3
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 1.1e-28 131.0 217 40.1
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 1.1e-28 131.0 140 50.0
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 2.4e-28 129.8 142 52.1
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 2.4e-28 129.8 255 39.2
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.6e-27 127.1 258 36.8
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 1.6e-27 127.1 279 35.1
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 4.6e-27 125.6 265 35.5
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 6.0e-27 125.2 258 37.6
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 7.9e-27 124.8 262 38.2
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 1.8e-26 123.6 263 37.3
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 2.3e-26 123.2 279 35.5
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 5.1e-26 122.1 258 36.8
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 6.7e-26 121.7 215 36.3
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 7.4e-25 118.2 140 47.9
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 7.4e-25 118.2 140 47.9
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 9.6e-25 117.9 199 38.7
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 1.6e-24 117.1 143 46.9
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 2.8e-24 116.3 164 42.7
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 1.5e-22 110.5 245 35.1
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 1.5e-22 110.5 266 35.7
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 2.6e-22 109.8 230 34.8
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 7.6e-22 108.2 240 34.2
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.6e-19 100.5 126 45.2
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 4.8e-16 89.0 60 61.7
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.5e-14 84.0 216 36.1
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 2.6e-14 83.2 227 28.2
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 2.9e-13 79.7 155 35.5
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 3.0e-10 69.7 68 48.5
unitig_747.g21677 Utricularia gibba HOM05D006635 ORTHO05D008047 8.2e-08 61.6 180 25.6
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 3.1e-07 59.7 58 44.8
TAR636G0517 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.0e-05 54.7 84 44.0


User provided reference genes

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