Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0061 Punica granatum HOM05D005691 ORTHO05D007096 1.6e-64 249.2 123 100.0
PGR042G3586 Punica granatum HOM05D005691 ORTHO05D007096 2.7e-59 231.9 119 95.8
Gohir.D07G197400 Gossypium hirsutum HOM05D005691 ORTHO05D007096 6.2e-32 141.0 122 58.2
Gorai.001G221100 Gossypium raimondii HOM05D005691 ORTHO05D007096 8.2e-32 140.6 122 58.2
Gohir.A07G191000 Gossypium hirsutum HOM05D005691 ORTHO05D007096 1.1e-31 140.2 122 58.2
CANSAT64G0049 Cannabis sativa HOM05D005691 ORTHO05D007096 1.4e-31 139.8 119 54.6
CiPaw.03G279200 Carya illinoinensis HOM05D005691 ORTHO05D007096 6.9e-31 137.5 125 57.6
GSVIVG01030051001 Vitis vinifera HOM05D005691 ORTHO05D007096 2.6e-30 135.6 122 59.8
Prupe.3G200800 Prunus persica HOM05D005691 ORTHO05D007096 7.6e-30 134.0 124 54.8
QL08p028494 Quercus lobata HOM05D005691 ORTHO05D007096 7.6e-30 134.0 120 55.0
Haze_12684 Corylus avellana HOM05D005691 ORTHO05D007096 3.8e-29 131.7 123 54.5
MD17G1113600 Malus domestica HOM05D005691 ORTHO05D007096 6.5e-29 131.0 122 56.6
RcHm_v2.0_Chr2g0156551 Rosa chinensis HOM05D005691 ORTHO05D007096 1.1e-28 130.2 122 54.1
FvH4_6g40930 Fragaria vesca HOM05D005691 ORTHO05D007096 1.4e-28 129.8 123 52.8
FAN14G0170 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.4e-28 129.8 123 52.8
FAN05G1189 Fragaria x ananassa HOM05D005691 ORTHO05D007096 1.9e-28 129.4 123 52.0
TPR.G1235 Trifolium pratense HOM05D005691 ORTHO05D007096 3.2e-28 128.6 121 51.2
FAN09G3499 Fragaria x ananassa HOM05D005691 ORTHO05D007096 4.2e-28 128.3 123 52.0
LjContig00081g0016683 Lotus japonicus HOM05D005691 ORTHO05D007096 4.2e-28 128.3 121 50.4
TAR626G1898 Trochodendron aralioides HOM05D005691 ORTHO05D007096 4.2e-28 128.3 122 54.9
Eucgr.A01048 Eucalyptus grandis HOM05D005691 ORTHO05D007096 9.3e-28 127.1 123 52.8
Psat2g005000 Pisum sativum HOM05D005691 ORTHO05D007096 1.2e-27 126.7 121 51.2
CSS0009966 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 2.7e-27 125.6 122 55.7
CSS0040753 Camellia sinensis var. sinensis HOM05D005691 ORTHO05D007096 2.7e-27 125.6 122 55.7
TWI18G1215 Tripterygium wilfordii HOM05D005691 ORTHO05D007096 3.5e-27 125.2 122 53.3
Cpa.g.sc211.12 Carica papaya HOM05D005691 ORTHO05D007096 6.0e-27 124.4 121 54.5
Rhsim04G0038700 Rhododendron simsii HOM05D005691 ORTHO05D007096 6.0e-27 124.4 122 54.1
AUR62015058 Chenopodium quinoa HOM05D005691 ORTHO05D007096 1.3e-26 123.2 121 52.1
MELO3C024202.2 Cucumis melo HOM05D005691 ORTHO05D007096 1.3e-26 123.2 122 53.3
COL.COLO4_09229 Corchorus olitorius HOM05D005691 ORTHO05D007096 2.3e-26 122.5 122 52.5
CsaV3_7G002600 Cucumis sativus L. HOM05D005691 ORTHO05D007096 3.0e-26 122.1 122 51.6
Thecc.01G191500 Theobroma cacao HOM05D005691 ORTHO05D007096 3.9e-26 121.7 122 52.5
ClCG02G002780 Citrullus lanatus HOM05D005691 ORTHO05D007096 5.1e-26 121.3 122 52.5
Potri.002G221300 Populus trichocarpa HOM05D005691 ORTHO05D007096 5.1e-26 121.3 124 51.6
AUR62017514 Chenopodium quinoa HOM05D005691 ORTHO05D007096 8.7e-26 120.6 117 53.0
Ciclev10014054m.g Citrus clementina HOM05D005691 ORTHO05D007096 1.1e-25 120.2 122 52.5
Actinidia21444 Actinidia chinensis HOM05D005691 ORTHO05D007096 1.5e-25 119.8 119 52.1
PSO675G5893 Papaver somniferum HOM05D005691 ORTHO05D007096 1.9e-25 119.4 122 53.3
MSTRG.6644 Avicennia marina HOM05D005691 ORTHO05D007096 2.5e-25 119.0 122 50.8
Ca_06452_v3 Cicer arietinum L. HOM05D005691 ORTHO05D007096 2.5e-25 119.0 121 47.1
Cc00_g04460 Coffea canephora HOM05D005691 ORTHO05D007096 2.5e-25 119.0 122 49.2
FAN02G1659 Fragaria x ananassa HOM05D005691 ORTHO05D007096 2.5e-25 119.0 137 46.7
arahy.Tifrunner.gnm1.ann1.2CK2M8 Arachis hypogaea HOM05D005691 ORTHO05D007096 3.3e-25 118.6 122 50.0
arahy.Tifrunner.gnm1.ann1.5BD1HA Arachis hypogaea HOM05D005691 ORTHO05D007096 4.3e-25 118.2 122 50.0
Sabra02G0169100 Salix brachista HOM05D005691 ORTHO05D007096 5.7e-25 117.9 124 50.0
VMungo0647G0393 Vigna mungo HOM05D005691 ORTHO05D007096 5.7e-25 117.9 121 47.9
EL10Ac9g22718 Beta vulgaris HOM05D005691 ORTHO05D007096 7.4e-25 117.5 123 52.0
Migut.M00032 Erythranthe guttata HOM05D005691 ORTHO05D007096 1.3e-24 116.7 122 49.2
Lalb_Chr10g0107611 Lupinus albus HOM05D005691 ORTHO05D007096 1.3e-24 116.7 121 50.4
Manes.12G061100 Manihot esculenta HOM05D005691 ORTHO05D007096 1.3e-24 116.7 122 49.2
Lj8A134T75 Lonicera japonica HOM05D005691 ORTHO05D007096 1.6e-24 116.3 122 47.5
Medtr5g097260 Medicago truncatula HOM05D005691 ORTHO05D007096 1.6e-24 116.3 121 47.1
DCAR_019708 Daucus carota HOM05D005691 ORTHO05D007096 3.7e-24 115.2 122 48.4
Lsat_1_v5_gn_9_104801 Lactuca sativa HOM05D005691 ORTHO05D007096 3.7e-24 115.2 119 50.4
Sed0003649 Sechium edule HOM05D005691 ORTHO05D007096 3.7e-24 115.2 122 50.0
Phvul.008G284900 Phaseolus vulgaris HOM05D005691 ORTHO05D007096 4.8e-24 114.8 121 47.1
Glyma.02G305200 Glycine max HOM05D005691 ORTHO05D007096 8.2e-24 114.0 121 47.9
Glyma.14G008200 Glycine max HOM05D005691 ORTHO05D007096 8.2e-24 114.0 121 47.9
Atru.chr6.3368 Acer truncatum HOM05D005691 ORTHO05D007096 1.1e-23 113.6 109 54.1
Hma1.2p1_0133F.1_g061380 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 2.4e-23 112.5 122 50.0
ECA240G2675 Erigeron canadensis HOM05D005691 ORTHO05D007096 4.1e-23 111.7 119 51.3
Hund01594 Selenicereus undatus HOM05D005691 ORTHO05D007096 5.3e-23 111.3 122 47.5
Nn1g07449 Nelumbo nucifera HOM05D005691 ORTHO05D007096 1.2e-22 110.2 122 48.4
ATR1149G135 Amborella trichopoda HOM05D005691 ORTHO05D007096 2.0e-22 109.4 124 48.4
HanXRQChr03g0075241 Helianthus annuus HOM05D005691 ORTHO05D007096 2.0e-22 109.4 119 48.7
Oeu029977.1 Olea europaea HOM05D005691 ORTHO05D007096 2.0e-22 109.4 124 46.8
Sp3g23610 Schrenkiella parvula HOM05D005691 ORTHO05D007096 5.9e-22 107.8 125 44.8
MBI16_g26390_MAGBIO Magnolia biondii HOM05D005691 ORTHO05D007096 2.2e-21 105.9 124 46.8
CAN.G854.9 Capsicum annuum HOM05D005691 ORTHO05D007096 2.9e-21 105.5 99 56.6
Thhalv10003521m.g Eutrema salsugineum HOM05D005691 ORTHO05D007096 2.9e-21 105.5 125 44.0
AT2G05120 Arabidopsis thaliana HOM05D005691 ORTHO05D007096 5.0e-21 104.8 122 43.4
PGSC0003DMG400006150 Solanum tuberosum HOM05D005691 ORTHO05D007096 5.0e-21 104.8 122 48.4
Dinv07866 Davidia involucrata HOM05D005691 ORTHO05D007096 6.5e-21 104.4 99 56.6
SGA_v2.0_scaffold73G24511 Striga asiatica HOM05D005691 ORTHO05D007096 6.5e-21 104.4 98 52.0
AL3G42730 Arabidopsis lyrata HOM05D005691 ORTHO05D007096 8.5e-21 104.0 122 43.4
vmacro09398 Vaccinium macrocarpon HOM05D005691 ORTHO05D007096 8.5e-21 104.0 186 36.0
CARHR103010 Cardamine hirsuta HOM05D005691 ORTHO05D007096 1.1e-20 103.6 122 42.6
SEGI_38606 Sequoiadendron giganteum HOM05D005691 ORTHO05D007096 1.4e-20 103.2 118 45.8
BcaB06g26838 Brassica carinata HOM05D005691 ORTHO05D007096 1.9e-20 102.8 125 43.2
Carub.0003s2665 Capsella rubella HOM05D005691 ORTHO05D007096 1.9e-20 102.8 122 43.4
Peaxi162Scf00776g00233 Petunia axillaris HOM05D005691 ORTHO05D007096 1.9e-20 102.8 122 48.4
Sopen07g024300 Solanum pennellii HOM05D005691 ORTHO05D007096 1.9e-20 102.8 122 48.4
Nitab4.5_0009877g0010 Nicotiana tabacum HOM05D005691 ORTHO05D007096 2.5e-20 102.4 99 55.6
Solyc07g047860.4 Solanum lycopersicum HOM05D005691 ORTHO05D007096 2.5e-20 102.4 122 48.4
SGA_v2.0_scaffold292G47412 Striga asiatica HOM05D005691 ORTHO05D007096 3.2e-20 102.1 124 43.5
Nitab4.5_0000441g0080 Nicotiana tabacum HOM05D005691 ORTHO05D007096 4.2e-20 101.7 99 53.5
Sc21g0000790 Simmondsia chinensis HOM05D005691 ORTHO05D007096 5.5e-20 101.3 124 43.5
SHI10144 Sapria himalayana HOM05D005691 ORTHO05D007096 7.2e-20 100.9 126 44.4
Aqoxy4G02218 Aquilegia oxysepala HOM05D005691 ORTHO05D007096 1.6e-19 99.8 110 47.3
BcaC01g03178 Brassica carinata HOM05D005691 ORTHO05D007096 2.1e-19 99.4 122 41.0
BolC3t17809H Brassica oleracea HOM05D005691 ORTHO05D007096 2.1e-19 99.4 122 41.0
BraA03t13590Z Brassica rapa HOM05D005691 ORTHO05D007096 2.7e-19 99.0 122 41.0
A03p44570 Brassica napus HOM05D005691 ORTHO05D007096 4.6e-19 98.2 122 41.0
C03p55370 Brassica napus HOM05D005691 ORTHO05D007096 4.6e-19 98.2 122 41.0
SGA_v2.0_scaffold292G47401 Striga asiatica HOM05D005691 ORTHO05D007096 4.6e-19 98.2 124 43.5
THA.LOC104815358 Tarenaya hassleriana HOM05D005691 ORTHO05D007096 1.4e-18 96.7 123 43.1
BcaB08g34496 Brassica carinata HOM05D005691 ORTHO05D007096 9.7e-17 90.5 122 40.2
SMO351G0158 Selaginella moellendorffii HOM05D005691 ORTHO05D007096 1.3e-16 90.1 112 42.9
unitig_746.g26642 Utricularia gibba HOM05D005691 ORTHO05D007096 3.7e-16 88.6 119 42.0
Mapoly0061s0124 Marchantia polymorpha HOM05D005691 ORTHO05D007096 1.1e-15 87.0 118 41.5
Os03g0225500 Oryza sativa ssp. japonica HOM05D005691 ORTHO05D007096 2.6e-14 82.4 123 35.0
Zm00001eb399630 Zea mays HOM05D005691 ORTHO05D007096 2.6e-14 82.4 124 33.9
AagrBONN_evm.TU.Sc2ySwM_362.2878 Anthoceros agrestis HOM05D005691 ORTHO05D007096 1.3e-13 80.1 99 37.4
Pp3c21_14430 Physcomitrium patens HOM05D005691 ORTHO05D007096 5.0e-13 78.2 115 39.1
BcaC06g35896 Brassica carinata HOM05D005691 ORTHO05D007096 9.4e-12 73.9 81 43.2
Hma1.2p1_0133F.1_g061370 Hydrangea macrophylla HOM05D005691 ORTHO05D007096 1.6e-11 73.2 79 51.9
SalBow7G1588 Salvia bowleyana HOM05D005691 ORTHO05D007096 1.3e-08 63.5 93 34.4
CDE04G3337 Ceratophyllum demersum HOM05D005691 ORTHO05D007096 3.7e-08 62.0 63 50.8
CBR_g39814 Chara braunii HOM05D005691 ORTHO05D007096 4.1e-07 58.5 112 34.8


User provided reference genes

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