Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR004G0922 Punica granatum HOM05D006635 ORTHO05D008047 2.5e-98 362.1 175 100.0
PGR004G0241 Punica granatum HOM05D006635 ORTHO05D008047 8.8e-72 273.9 159 85.5
Eucgr.H03153 Eucalyptus grandis HOM05D006635 ORTHO05D008047 1.2e-60 236.9 159 72.3
Dinv29905 Davidia involucrata HOM05D006635 ORTHO05D008047 1.0e-56 223.8 159 67.9
Hma1.2p1_0650F.1_g195460 Hydrangea macrophylla HOM05D006635 ORTHO05D008047 8.3e-54 214.2 155 67.7
CSS0008878 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 4.1e-53 211.8 159 62.9
CiPaw.01G189900 Carya illinoinensis HOM05D006635 ORTHO05D008047 1.7e-51 206.5 159 64.8
Haze_11307 Corylus avellana HOM05D006635 ORTHO05D008047 1.7e-51 206.5 159 63.5
TWI53G1330 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.7e-51 206.5 159 62.9
TWI53G1448 Tripterygium wilfordii HOM05D006635 ORTHO05D008047 1.7e-51 206.5 159 62.9
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 5.0e-51 204.9 159 64.2
Haze_11310 Corylus avellana HOM05D006635 ORTHO05D008047 5.0e-51 204.9 159 62.9
GSVIVG01018125001 Vitis vinifera HOM05D006635 ORTHO05D008047 5.5e-50 201.4 157 63.7
COL.COLO4_15799 Corchorus olitorius HOM05D006635 ORTHO05D008047 7.2e-50 201.1 155 62.6
Cc03_g04920 Coffea canephora HOM05D006635 ORTHO05D008047 9.4e-50 200.7 160 61.9
Nn1g02620 Nelumbo nucifera HOM05D006635 ORTHO05D008047 9.4e-50 200.7 159 60.4
Thecc.04G246700 Theobroma cacao HOM05D006635 ORTHO05D008047 1.2e-49 200.3 155 63.2
Ciclev10005689m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.6e-49 199.9 155 62.6
Ciclev10005690m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.6e-49 199.9 159 60.4
Oeu058885.1 Olea europaea HOM05D006635 ORTHO05D008047 2.1e-49 199.5 175 55.4
FvH4_2g07190 Fragaria vesca HOM05D006635 ORTHO05D008047 3.6e-49 198.7 156 62.2
FAN24G3344 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.6e-49 198.7 156 62.2
vmacro15410 Vaccinium macrocarpon HOM05D006635 ORTHO05D008047 4.7e-49 198.4 159 59.7
RcHm_v2.0_Chr1g0323991 Rosa chinensis HOM05D006635 ORTHO05D008047 2.3e-48 196.1 156 61.5
FAN20G2319 Fragaria x ananassa HOM05D006635 ORTHO05D008047 3.0e-48 195.7 156 61.5
Potri.010G075900 Populus trichocarpa HOM05D006635 ORTHO05D008047 4.0e-48 195.3 155 63.2
Gohir.D10G153800 Gossypium hirsutum HOM05D006635 ORTHO05D008047 6.8e-48 194.5 155 60.6
Gorai.011G171700 Gossypium raimondii HOM05D006635 ORTHO05D008047 6.8e-48 194.5 155 60.6
Lj6A657T45 Lonicera japonica HOM05D006635 ORTHO05D008047 6.8e-48 194.5 159 59.1
CANSAT78G1035 Cannabis sativa HOM05D006635 ORTHO05D008047 8.8e-48 194.1 161 58.4
Prupe.1G031500 Prunus persica HOM05D006635 ORTHO05D008047 8.8e-48 194.1 157 58.6
Cpa.g.sc58.53 Carica papaya HOM05D006635 ORTHO05D008047 2.6e-47 192.6 159 61.0
THA.LOC104808600 Tarenaya hassleriana HOM05D006635 ORTHO05D008047 2.6e-47 192.6 158 59.5
CsaV3_7G006710 Cucumis sativus L. HOM05D006635 ORTHO05D008047 4.4e-47 191.8 159 59.1
Manes.15G037200 Manihot esculenta HOM05D006635 ORTHO05D008047 5.7e-47 191.4 155 61.9
Gohir.A10G113600 Gossypium hirsutum HOM05D006635 ORTHO05D008047 7.5e-47 191.0 155 60.0
Sc19g0003750 Simmondsia chinensis HOM05D006635 ORTHO05D008047 7.5e-47 191.0 158 55.7
PGSC0003DMG400016282 Solanum tuberosum HOM05D006635 ORTHO05D008047 7.5e-47 191.0 157 59.9
Actinidia08441 Actinidia chinensis HOM05D006635 ORTHO05D008047 9.8e-47 190.7 160 61.2
Lalb_Chr02g0150381 Lupinus albus HOM05D006635 ORTHO05D008047 9.8e-47 190.7 160 56.2
MD13G1208000 Malus domestica HOM05D006635 ORTHO05D008047 9.8e-47 190.7 157 57.3
MELO3C018624.2 Cucumis melo HOM05D006635 ORTHO05D008047 1.7e-46 189.9 165 57.6
Nitab4.5_0000302g0050 Nicotiana tabacum HOM05D006635 ORTHO05D008047 1.7e-46 189.9 157 58.6
MSTRG.4101 Avicennia marina HOM05D006635 ORTHO05D008047 2.2e-46 189.5 160 58.8
Atru.chr4.2211 Acer truncatum HOM05D006635 ORTHO05D008047 2.8e-46 189.1 155 56.8
Sc19g0005210 Simmondsia chinensis HOM05D006635 ORTHO05D008047 2.8e-46 189.1 158 55.1
Aqoxy5G00314 Aquilegia oxysepala HOM05D006635 ORTHO05D008047 3.7e-46 188.7 159 57.2
Nitab4.5_0008721g0010 Nicotiana tabacum HOM05D006635 ORTHO05D008047 4.9e-46 188.3 157 58.6
CAN.G118.6 Capsicum annuum HOM05D006635 ORTHO05D008047 6.3e-46 188.0 157 59.2
ClCG09G015590 Citrullus lanatus HOM05D006635 ORTHO05D008047 6.3e-46 188.0 172 56.4
AL3G37550 Arabidopsis lyrata HOM05D006635 ORTHO05D008047 3.1e-45 185.7 158 55.1
HanXRQChr13g0424511 Helianthus annuus HOM05D006635 ORTHO05D008047 4.1e-45 185.3 159 56.0
Solyc06g053770.4 Solanum lycopersicum HOM05D006635 ORTHO05D008047 4.1e-45 185.3 157 58.6
Sed0017322 Sechium edule HOM05D006635 ORTHO05D008047 5.4e-45 184.9 159 59.1
Sopen06g018890 Solanum pennellii HOM05D006635 ORTHO05D008047 1.2e-44 183.7 157 58.0
Sp3g20780 Schrenkiella parvula HOM05D006635 ORTHO05D008047 1.6e-44 183.3 158 54.4
PSO832G2723 Papaver somniferum HOM05D006635 ORTHO05D008047 3.5e-44 182.2 157 58.0
arahy.Tifrunner.gnm1.ann1.20YP49 Arachis hypogaea HOM05D006635 ORTHO05D008047 7.7e-44 181.0 159 56.6
arahy.Tifrunner.gnm1.ann1.P8HXAC Arachis hypogaea HOM05D006635 ORTHO05D008047 7.7e-44 181.0 159 56.6
AT3G23100 Arabidopsis thaliana HOM05D006635 ORTHO05D008047 1.3e-43 180.3 158 53.2
Carub.0003s2327 Capsella rubella HOM05D006635 ORTHO05D008047 1.3e-43 180.3 158 53.2
CARHR099010 Cardamine hirsuta HOM05D006635 ORTHO05D008047 1.3e-43 180.3 155 56.1
AUR62002251 Chenopodium quinoa HOM05D006635 ORTHO05D008047 1.3e-43 180.3 158 56.3
Ciclev10007171m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.3e-43 180.3 134 62.7
PSO210G4915 Papaver somniferum HOM05D006635 ORTHO05D008047 1.7e-43 179.9 157 56.7
Migut.G00439 Erythranthe guttata HOM05D006635 ORTHO05D008047 2.3e-43 179.5 159 56.0
Hund11856 Selenicereus undatus HOM05D006635 ORTHO05D008047 2.9e-43 179.1 146 59.6
Lj5g0017333 Lotus japonicus HOM05D006635 ORTHO05D008047 8.6e-43 177.6 158 54.4
A01p31980 Brassica napus HOM05D006635 ORTHO05D008047 1.1e-42 177.2 158 53.8
BraA01t03324Z Brassica rapa HOM05D006635 ORTHO05D008047 1.1e-42 177.2 158 53.8
Medtr1g075330 Medicago truncatula HOM05D006635 ORTHO05D008047 1.1e-42 177.2 158 57.0
BcaB04g20471 Brassica carinata HOM05D006635 ORTHO05D008047 1.5e-42 176.8 158 54.4
BolC1t04048H Brassica oleracea HOM05D006635 ORTHO05D008047 1.9e-42 176.4 158 53.8
Psat4g107880 Pisum sativum HOM05D006635 ORTHO05D008047 2.5e-42 176.0 158 56.3
Aa31LG8G9580 Aethionema arabicum HOM05D006635 ORTHO05D008047 4.2e-42 175.3 176 51.7
DCAR_027282 Daucus carota HOM05D006635 ORTHO05D008047 4.2e-42 175.3 159 55.3
PGR083G1020 Punica granatum HOM05D006635 ORTHO05D008047 4.2e-42 175.3 137 67.2
FAN27G3431 Fragaria x ananassa HOM05D006635 ORTHO05D008047 5.6e-42 174.9 182 51.6
Ah.13g066120 Amaranthus hybridus HOM05D006635 ORTHO05D008047 7.2e-42 174.5 155 52.9
HPP92_023529 Vanilla planifolia HOM05D006635 ORTHO05D008047 9.5e-42 174.1 158 55.1
Zm00001eb056730 Zea mays HOM05D006635 ORTHO05D008047 9.5e-42 174.1 159 57.9
BcaC09g49245 Brassica carinata HOM05D006635 ORTHO05D008047 1.2e-41 173.7 158 53.2
Ca_09839_v3 Cicer arietinum L. HOM05D006635 ORTHO05D008047 2.1e-41 172.9 158 54.4
Os03g0740800 Oryza sativa ssp. japonica HOM05D006635 ORTHO05D008047 2.8e-41 172.6 158 56.3
ECA240G1129 Erigeron canadensis HOM05D000856 ORTHO05D002253 4.7e-41 171.8 157 53.5
Sabra10G0032800 Salix brachista HOM05D006635 ORTHO05D008047 8.0e-41 171.0 156 57.1
PGR102G1543 Punica granatum HOM05D006635 ORTHO05D008047 4.0e-40 168.7 147 61.2
CDE04G0173 Ceratophyllum demersum HOM05D006635 ORTHO05D008047 5.2e-40 168.3 154 55.2
QL06p015844 Quercus lobata HOM05D006635 ORTHO05D008047 4.4e-39 165.2 251 38.6
Duzib151G0047 Durio zibethinus HOM05D006635 ORTHO05D008047 1.8e-37 159.8 155 56.1
Peaxi162Scf00325g00713 Petunia axillaris HOM05D006635 ORTHO05D008047 5.4e-37 158.3 158 50.6
ATR0824G049 Amborella trichopoda HOM05D006635 ORTHO05D008047 9.2e-37 157.5 158 52.5
EL10Ac3g05891 Beta vulgaris HOM05D006635 ORTHO05D008047 7.8e-36 154.5 146 50.0
C01p40990 Brassica napus HOM05D006635 ORTHO05D008047 1.3e-35 153.7 140 52.1
CSS0031458 Camellia sinensis var. sinensis HOM05D006635 ORTHO05D008047 5.0e-35 151.8 185 44.3
Glyma.10G184800 Glycine max HOM05D006635 ORTHO05D008047 5.0e-35 151.8 155 49.7
Glyma.20G205600 Glycine max HOM05D006635 ORTHO05D008047 5.0e-35 151.8 158 48.7
Phvul.007G125600 Phaseolus vulgaris HOM05D006635 ORTHO05D008047 1.9e-34 149.8 158 47.5
Thhalv10022194m.g Eutrema salsugineum HOM05D006635 ORTHO05D008047 8.0e-33 144.4 158 45.6
TAR636G2119 Trochodendron aralioides HOM05D006635 ORTHO05D008047 1.4e-32 143.7 97 66.0
VMungo0720G1578 Vigna mungo HOM05D006635 ORTHO05D008047 3.2e-29 132.5 158 44.3
Lsat_1_v5_gn_3_122920 Lactuca sativa HOM05D006635 ORTHO05D008047 1.7e-27 126.7 109 58.7
TPR.G27195 Trifolium pratense HOM05D006635 ORTHO05D008047 2.8e-25 119.4 91 60.4
MBI19_g38372_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 1.3e-19 100.5 143 39.9
Mapoly0014s0074 Marchantia polymorpha HOM05D006635 ORTHO05D008047 1.5e-18 97.1 150 33.3
AagrBONN_evm.TU.Sc2ySwM_228.5661 Anthoceros agrestis HOM05D006635 ORTHO05D008047 8.1e-17 91.3 153 31.4
Ciclev10029925m.g Citrus clementina HOM05D006635 ORTHO05D008047 1.5e-15 87.0 137 38.0
AUR62015462 Chenopodium quinoa HOM05D006635 ORTHO05D008047 5.4e-13 78.6 50 70.0
SEGI_11171 Sequoiadendron giganteum HOM05D006635 ORTHO05D008047 7.1e-13 78.2 126 33.3
Pp3c14_21160 Physcomitrium patens HOM05D006635 ORTHO05D008047 1.1e-10 70.9 166 27.7
MBI19_g44428_MAGBIO Magnolia biondii HOM05D006635 ORTHO05D008047 5.6e-10 68.6 96 43.8
C01p40970 Brassica napus HOM05D006635 ORTHO05D008047 1.2e-07 60.8 58 46.6


User provided reference genes

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