Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Os11g0533100 Oryza sativa ssp. japonica HOM05D005263 ORTHO05D006891 2.7e-81 305.8 226 100.0
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 5.2e-24 115.5 172 41.9
Sc07g0003930 Simmondsia chinensis HOM05D005263 ORTHO05D006891 8.8e-24 114.8 154 42.9
Oeu048684.2 Olea europaea HOM05D005263 ORTHO05D006891 2.2e-22 110.2 154 42.2
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 1.1e-21 107.8 155 41.9
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 1.4e-21 107.5 154 39.6
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.4e-21 107.5 171 37.4
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 1.8e-21 107.1 154 40.3
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 2.4e-21 106.7 154 40.9
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 2.4e-21 106.7 171 37.4
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 5.3e-21 105.5 154 40.3
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 5.3e-21 105.5 157 38.9
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 5.3e-21 105.5 154 40.9
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 1.2e-20 104.4 155 40.6
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 1.2e-20 104.4 154 37.0
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 1.2e-20 104.4 148 39.2
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.2e-20 104.4 148 39.2
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 1.2e-20 104.4 164 37.8
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 1.6e-20 104.0 155 40.6
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 1.6e-20 104.0 154 40.9
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 2.0e-20 103.6 155 40.0
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 2.7e-20 103.2 154 40.3
CiPaw.03G000200 Carya illinoinensis HOM05D005263 ORTHO05D006891 2.7e-20 103.2 154 39.6
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 3.5e-20 102.8 155 40.0
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 3.5e-20 102.8 148 39.2
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 3.5e-20 102.8 148 39.2
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 3.5e-20 102.8 154 40.3
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 3.5e-20 102.8 154 39.0
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 4.5e-20 102.4 154 39.0
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 5.9e-20 102.1 154 40.3
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 5.9e-20 102.1 154 39.6
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 5.9e-20 102.1 154 38.3
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 7.7e-20 101.7 148 38.5
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 7.7e-20 101.7 155 40.6
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 1.0e-19 101.3 154 38.3
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 1.3e-19 100.9 154 39.0
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.3e-19 100.9 154 39.6
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 1.3e-19 100.9 156 38.5
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 1.7e-19 100.5 154 39.0
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 1.7e-19 100.5 154 39.6
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 1.7e-19 100.5 155 38.7
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 1.7e-19 100.5 154 39.0
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 2.2e-19 100.1 156 38.5
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 2.2e-19 100.1 154 37.7
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 2.2e-19 100.1 154 40.3
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 2.9e-19 99.8 154 44.2
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 2.9e-19 99.8 159 37.7
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 3.8e-19 99.4 155 40.6
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 5.0e-19 99.0 154 39.0
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 6.5e-19 98.6 156 38.5
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 6.5e-19 98.6 156 38.5
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 8.5e-19 98.2 154 38.3
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 1.1e-18 97.8 154 38.3
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 1.1e-18 97.8 154 37.7
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 1.1e-18 97.8 154 38.3
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 1.1e-18 97.8 154 38.3
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 1.5e-18 97.4 154 38.3
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 1.5e-18 97.4 154 37.0
unitig_52.g17689 Utricularia gibba HOM05D005263 ORTHO05D006891 1.9e-18 97.1 154 37.7
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 2.5e-18 96.7 128 41.4
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 3.2e-18 96.3 159 39.6
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 3.2e-18 96.3 159 39.6
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 4.2e-18 95.9 154 37.0
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 4.2e-18 95.9 177 37.3
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 4.2e-18 95.9 154 37.0
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 7.2e-18 95.1 154 39.0
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 7.2e-18 95.1 154 37.0
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 7.2e-18 95.1 154 37.7
Rhsim10G0000700 Rhododendron simsii HOM05D005263 ORTHO05D006891 7.2e-18 95.1 155 40.6
vmacro22255 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 9.4e-18 94.7 155 38.1
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 2.1e-17 93.6 156 37.2
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 2.1e-17 93.6 154 37.0
SEGI_32569 Sequoiadendron giganteum HOM05D005263 ORTHO05D006891 2.1e-17 93.6 148 37.2
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 2.7e-17 93.2 154 36.4
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 3.6e-17 92.8 154 35.1
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 4.7e-17 92.4 154 35.1
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 8.0e-17 91.7 156 37.2
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 8.0e-17 91.7 154 37.7
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 1.0e-16 91.3 154 35.7
Gohir.A09G000074 Gossypium hirsutum HOM05D005263 ORTHO05D006891 1.4e-16 90.9 154 36.4
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 1.8e-16 90.5 151 35.8
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 4.0e-16 89.4 154 36.4
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 8.8e-16 88.2 130 40.0
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 2.6e-15 86.7 135 37.8
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 3.4e-15 86.3 128 39.1
SGA_v2.0_scaffold20G09129 Striga asiatica HOM05D005263 ORTHO05D006891 1.1e-13 81.3 142 35.9
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 1.8e-13 80.5 78 52.6
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 3.1e-13 79.7 67 59.7
Hma1.2p1_0265F.1_g106770 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 2.0e-12 77.0 67 55.2
FAN09G0287 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.9e-10 70.5 125 32.8
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 3.2e-10 69.7 168 34.5
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 4.2e-10 69.3 67 49.3
Pp3c2_18110 Physcomitrium patens HOM05D005263 ORTHO05D006891 1.6e-09 67.4 86 44.2
CBR_g69987 Chara braunii HOM05D005263 ORTHO05D006891 2.7e-09 66.6 128 32.8
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 6.1e-09 65.5 65 50.8


User provided reference genes

Program Settings