Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu063389.1 Olea europaea HOM05D005074 ORTHO05D006853 4.9e-128 461.1 222 100.0
CSS0046053 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 6.1e-78 294.7 188 73.4
CSS0047541 Camellia sinensis var. sinensis HOM05D005074 ORTHO05D006853 6.1e-78 294.7 188 73.4
SGA_v2.0_scaffold85G26714 Striga asiatica HOM05D005074 ORTHO05D006853 1.8e-77 293.1 205 68.3
Nn2g10923 Nelumbo nucifera HOM05D005074 ORTHO05D006853 3.0e-77 292.4 187 73.8
Dinv13134 Davidia involucrata HOM05D005074 ORTHO05D006853 5.2e-77 291.6 185 76.2
TWI74G0571 Tripterygium wilfordii HOM05D005074 ORTHO05D006853 2.0e-76 289.7 183 72.7
GSVIVG01003941001 Vitis vinifera HOM05D005074 ORTHO05D006853 5.7e-76 288.1 187 72.2
Nitab4.5_0000195g0210 Nicotiana tabacum HOM05D005074 ORTHO05D006853 9.7e-76 287.3 188 73.4
QL08p015889 Quercus lobata HOM05D005074 ORTHO05D006853 2.2e-75 286.2 185 73.0
Haze_21033 Corylus avellana HOM05D005074 ORTHO05D006853 3.7e-75 285.4 181 74.6
Nitab4.5_0012964g0020 Nicotiana tabacum HOM05D005074 ORTHO05D006853 3.7e-75 285.4 188 72.9
Thecc.05G011500 Theobroma cacao HOM05D005074 ORTHO05D006853 4.8e-75 285.0 190 71.1
PGSC0003DMG400006257 Solanum tuberosum HOM05D005074 ORTHO05D006853 6.3e-75 284.6 187 72.7
Ciclev10011130m.g Citrus clementina HOM05D005074 ORTHO05D006853 1.1e-74 283.9 185 71.4
vmacro20302 Vaccinium macrocarpon HOM05D005074 ORTHO05D006853 1.1e-74 283.9 189 71.4
Cfa017171 Carpinus fangiana HOM05D005074 ORTHO05D006853 1.4e-74 283.5 181 73.5
Duzib128G0037 Durio zibethinus HOM05D005074 ORTHO05D006853 1.4e-74 283.5 192 69.8
CAN.G41.5 Capsicum annuum HOM05D005074 ORTHO05D006853 2.4e-74 282.7 182 72.5
CiPaw.10G158300 Carya illinoinensis HOM05D005074 ORTHO05D006853 2.4e-74 282.7 185 73.0
MSTRG.18991 Avicennia marina HOM05D005074 ORTHO05D006853 3.1e-74 282.3 182 70.9
Sopen09g001080 Solanum pennellii HOM05D005074 ORTHO05D006853 5.3e-74 281.6 182 72.5
Hma1.2p1_0501F.1_g167650 Hydrangea macrophylla HOM05D005074 ORTHO05D006853 7.0e-74 281.2 176 74.4
Prupe.6G280900 Prunus persica HOM05D005074 ORTHO05D006853 7.0e-74 281.2 185 71.9
Aqoxy4G02460 Aquilegia oxysepala HOM05D005074 ORTHO05D006853 9.1e-74 280.8 196 66.3
Solyc09g005100.4 Solanum lycopersicum HOM05D005074 ORTHO05D006853 1.2e-73 280.4 182 72.0
Lalb_Chr07g0191391 Lupinus albus HOM05D005074 ORTHO05D006853 3.5e-73 278.9 188 69.7
Atru.chr8.2282 Acer truncatum HOM05D005074 ORTHO05D006853 4.5e-73 278.5 188 69.1
RcHm_v2.0_Chr3g0462521 Rosa chinensis HOM05D005074 ORTHO05D006853 5.9e-73 278.1 184 70.7
Actinidia29087 Actinidia chinensis HOM05D005074 ORTHO05D006853 7.7e-73 277.7 171 75.4
Cc06_g01060 Coffea canephora HOM05D005074 ORTHO05D006853 1.0e-72 277.3 198 65.7
Gohir.D04G133000 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.7e-72 276.6 185 68.1
MBI03_g18944_MAGBIO Magnolia biondii HOM05D005074 ORTHO05D006853 1.7e-72 276.6 187 70.1
MD04G1160300 Malus domestica HOM05D005074 ORTHO05D006853 2.9e-72 275.8 187 71.7
Gorai.012G116900 Gossypium raimondii HOM05D005074 ORTHO05D006853 6.5e-72 274.6 184 67.9
Potri.016G120200 Populus trichocarpa HOM05D005074 ORTHO05D006853 6.5e-72 274.6 187 69.0
Glyma.01G117800 Glycine max HOM05D005074 ORTHO05D006853 1.1e-71 273.9 188 69.1
Gohir.A04G093700 Gossypium hirsutum HOM05D005074 ORTHO05D006853 1.1e-71 273.9 185 68.6
Sabra16G0116100 Salix brachista HOM05D005074 ORTHO05D006853 1.1e-71 273.9 185 69.7
TAR633G0154 Trochodendron aralioides HOM05D005074 ORTHO05D006853 1.1e-71 273.9 184 71.2
ClCG10G022350 Citrullus lanatus HOM05D005074 ORTHO05D006853 1.5e-71 273.5 195 67.7
CANSAT35G1267 Cannabis sativa HOM05D005074 ORTHO05D006853 2.5e-71 272.7 182 68.7
Peaxi162Scf01132g00134 Petunia axillaris HOM05D005074 ORTHO05D006853 4.2e-71 271.9 172 73.8
EL10Ac5g12524 Beta vulgaris HOM05D005074 ORTHO05D006853 5.5e-71 271.6 185 69.2
Lj5g0028092 Lotus japonicus HOM05D005074 ORTHO05D006853 5.5e-71 271.6 188 67.0
MELO3C009144.2 Cucumis melo HOM05D005074 ORTHO05D006853 7.2e-71 271.2 195 67.2
Rhsim05G0219800 Rhododendron simsii HOM05D005074 ORTHO05D006853 7.2e-71 271.2 188 69.7
Thhalv10012562m.g Eutrema salsugineum HOM05D005074 ORTHO05D006853 9.4e-71 270.8 186 66.1
THA.LOC104816650 Tarenaya hassleriana HOM05D005074 ORTHO05D006853 1.2e-70 270.4 187 66.3
TPR.G34365 Trifolium pratense HOM05D005074 ORTHO05D006853 1.2e-70 270.4 176 72.2
Sed0022379 Sechium edule HOM05D005074 ORTHO05D006853 1.6e-70 270.0 185 69.7
CsaV3_3G033540 Cucumis sativus L. HOM05D005074 ORTHO05D006853 2.7e-70 269.2 195 66.7
FAN02G3586 Fragaria x ananassa HOM05D005074 ORTHO05D006853 3.6e-70 268.9 187 66.8
arahy.Tifrunner.gnm1.ann1.N71AR0 Arachis hypogaea HOM05D005074 ORTHO05D006853 4.7e-70 268.5 175 71.4
Phvul.010G073200 Phaseolus vulgaris HOM05D005074 ORTHO05D006853 4.7e-70 268.5 176 71.6
Ca_13410_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 6.1e-70 268.1 187 69.0
Ca_13419_v3 Cicer arietinum L. HOM05D005074 ORTHO05D006853 6.1e-70 268.1 187 69.0
FAN14G3962 Fragaria x ananassa HOM05D005074 ORTHO05D006853 1.4e-69 266.9 188 66.5
VMungo0331G1905 Vigna mungo HOM05D005074 ORTHO05D006853 1.4e-69 266.9 176 71.0
FvH4_6g11090 Fragaria vesca HOM05D005074 ORTHO05D006853 1.8e-69 266.5 188 66.5
FAN05G5223 Fragaria x ananassa HOM05D005074 ORTHO05D006853 2.3e-69 266.2 188 66.0
PSO339G4313 Papaver somniferum HOM05D005074 ORTHO05D006853 5.2e-69 265.0 173 71.7
PSO384G2802 Papaver somniferum HOM05D005074 ORTHO05D006853 5.2e-69 265.0 171 72.5
AUR62030501 Chenopodium quinoa HOM05D005074 ORTHO05D006853 6.8e-69 264.6 183 68.9
Lj2C71T3 Lonicera japonica HOM05D005074 ORTHO05D006853 6.8e-69 264.6 170 71.8
Ah.02g115540 Amaranthus hybridus HOM05D005074 ORTHO05D006853 8.8e-69 264.2 186 67.2
FAN09G4669 Fragaria x ananassa HOM05D005074 ORTHO05D006853 8.8e-69 264.2 188 66.5
Sp6g40630 Schrenkiella parvula HOM05D005074 ORTHO05D006853 1.5e-68 263.5 186 65.6
AT5G01310 Arabidopsis thaliana HOM05D005074 ORTHO05D006853 2.0e-68 263.1 189 63.5
Carub.0006s0050 Capsella rubella HOM05D005074 ORTHO05D006853 2.0e-68 263.1 184 65.8
DCAR_006624 Daucus carota HOM05D005074 ORTHO05D006853 3.4e-68 262.3 173 71.1
HanXRQChr12g0383191 Helianthus annuus HOM05D005074 ORTHO05D006853 4.4e-68 261.9 188 68.1
Medtr1g024820 Medicago truncatula HOM05D005074 ORTHO05D006853 4.4e-68 261.9 187 66.3
PGR031G0257 Punica granatum HOM05D005074 ORTHO05D006853 4.4e-68 261.9 174 68.4
SalBow5G0276 Salvia bowleyana HOM05D005074 ORTHO05D006853 4.8e-67 258.5 208 61.1
Sc22g0002590 Simmondsia chinensis HOM05D005074 ORTHO05D006853 4.8e-67 258.5 169 69.8
BolC9t60195H Brassica oleracea HOM05D005074 ORTHO05D006853 1.1e-66 257.3 184 65.8
Psat6g003720 Pisum sativum HOM05D005074 ORTHO05D006853 1.1e-66 257.3 206 61.2
SalBow5G3519 Salvia bowleyana HOM05D005074 ORTHO05D006853 1.4e-66 256.9 208 60.6
AL6G10830 Arabidopsis lyrata HOM05D005074 ORTHO05D006853 1.8e-66 256.5 185 63.8
CARHR211670 Cardamine hirsuta HOM05D005074 ORTHO05D006853 2.4e-66 256.1 189 65.1
ATR0716G066 Amborella trichopoda HOM05D005074 ORTHO05D006853 3.1e-66 255.8 182 65.9
BraA10t45403Z Brassica rapa HOM05D005074 ORTHO05D006853 5.4e-66 255.0 189 63.0
A10p33710 Brassica napus HOM05D005074 ORTHO05D006853 7.0e-66 254.6 189 63.0
Cpa.g.sc120.24 Carica papaya HOM05D005074 ORTHO05D006853 7.0e-66 254.6 188 63.8
Aa31LG1G22940 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.6e-65 253.4 177 65.0
AUR62030792 Chenopodium quinoa HOM05D005074 ORTHO05D006853 2.0e-65 253.1 180 67.2
C09p74610 Brassica napus HOM05D005074 ORTHO05D006853 4.5e-65 251.9 189 62.4
unitig_27.g24848 Utricularia gibba HOM05D005074 ORTHO05D006853 1.0e-64 250.8 184 62.0
Migut.J00131 Erythranthe guttata HOM05D005074 ORTHO05D006853 2.2e-64 249.6 210 61.4
COL.COLO4_14500 Corchorus olitorius HOM05D005074 ORTHO05D006853 2.7e-62 242.7 154 73.4
BcaC06g31973 Brassica carinata HOM05D005074 ORTHO05D006853 4.0e-61 238.8 161 67.7
Lsat_1_v5_gn_8_100780 Lactuca sativa HOM05D005074 ORTHO05D006853 6.8e-61 238.0 205 58.0
Oeu033574.2 Olea europaea HOM05D005074 ORTHO05D006853 6.8e-61 238.0 177 65.0
Zm00001eb013510 Zea mays HOM05D005074 ORTHO05D006853 2.0e-60 236.5 185 60.5
Hund10968 Selenicereus undatus HOM05D005074 ORTHO05D006853 2.3e-56 223.0 143 72.7
MD05G1095500 Malus domestica HOM05D005074 ORTHO05D006853 1.0e-53 214.2 150 67.3
HPP92_025102 Vanilla planifolia HOM05D005074 ORTHO05D006853 1.6e-49 200.3 141 68.1
SHI12858 Sapria himalayana HOM05D005074 ORTHO05D006853 1.7e-48 196.8 141 63.8
Aa31LG1G22950 Aethionema arabicum HOM05D005074 ORTHO05D006853 5.0e-48 195.3 175 49.1
FAN09G1779 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.2e-46 188.3 171 57.3
Aa31sc2673G10 Aethionema arabicum HOM05D005074 ORTHO05D006853 8.0e-46 188.0 180 47.2
RcHm_v2.0_Chr3g0462501 Rosa chinensis HOM05D005074 ORTHO05D006853 1.5e-44 183.7 124 70.2
Aa31LG1G22960 Aethionema arabicum HOM05D005074 ORTHO05D006853 1.3e-43 180.6 183 47.0
SMO119G0484 Selaginella moellendorffii HOM05D005074 ORTHO05D006853 2.2e-43 179.9 178 47.8
Aa31LG8G1910 Aethionema arabicum HOM05D005074 ORTHO05D006853 7.0e-42 174.9 185 46.5
AagrBONN_evm.TU.Sc2ySwM_362.194 Anthoceros agrestis HOM05D005074 ORTHO05D006853 1.9e-39 166.8 199 41.7
Pp3c11_18160 Physcomitrium patens HOM05D005074 ORTHO05D006853 1.6e-38 163.7 174 43.1
FAN09G0145 Fragaria x ananassa HOM05D005074 ORTHO05D006853 6.2e-38 161.8 137 61.3
CBR_g45475 Chara braunii HOM05D005074 ORTHO05D006853 1.1e-34 151.0 190 38.9
CDE08G0259 Ceratophyllum demersum HOM05D005074 ORTHO05D006853 7.1e-34 148.3 190 43.7
Mapoly0120s0055 Marchantia polymorpha HOM05D005074 ORTHO05D006853 6.0e-33 145.2 155 46.5
MD12G1172800 Malus domestica HOM05D005074 ORTHO05D006853 9.5e-31 137.9 101 65.3
Eucgr.A00552 Eucalyptus grandis HOM05D005074 ORTHO05D006853 1.2e-28 131.0 85 69.4
Cre06.g297904 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D006853 2.3e-24 116.7 168 36.3
Aa31LG1G19700 Aethionema arabicum HOM05D005074 ORTHO05D023363 1.1e-13 81.3 70 54.3
ECA236G3605 Erigeron canadensis HOM05D005074 ORTHO05D006853 5.3e-13 79.0 54 66.7
Manes.09G106200 Manihot esculenta HOM05D005074 ORTHO05D006853 9.0e-13 78.2 54 66.7
Cre05.g239450 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 9.3e-10 68.2 170 28.8
Pp3c2_27000 Physcomitrium patens HOM05D005074 ORTHO05D034455 1.6e-09 67.4 139 28.8
Cre02.g079150 Chlamydomonas reinhardtii HOM05D005074 ORTHO05D034455 3.0e-08 63.2 163 25.8
SHI12859 Sapria himalayana HOM05D005074 ORTHO05D023363 8.7e-08 61.6 37 62.2
Hund10966 Selenicereus undatus HOM05D005074 ORTHO05D023363 1.1e-07 61.2 43 62.8
Rhsim05G0219600 Rhododendron simsii HOM05D005074 ORTHO05D006853 5.6e-07 58.9 37 70.3
Glyma.U000401 Glycine max HOM05D005074 ORTHO05D006853 9.6e-07 58.2 49 55.1


User provided reference genes

Program Settings