Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu061455.1 Olea europaea HOM05D005235 ORTHO05D006938 2.0e-283 978.4 494 100.0
Dinv25083 Davidia involucrata HOM05D005235 ORTHO05D006938 4.2e-204 714.9 450 80.2
Rhsim08G0037300 Rhododendron simsii HOM05D005235 ORTHO05D006938 1.0e-197 693.7 490 71.2
PGR142G4255 Punica granatum HOM05D005235 ORTHO05D006938 6.5e-197 691.0 495 72.3
Cc03_g16140 Coffea canephora HOM05D005235 ORTHO05D006938 4.2e-196 688.3 491 73.5
vmacro22930 Vaccinium macrocarpon HOM05D005235 ORTHO05D006938 7.2e-196 687.6 469 73.3
SalBow4G1042 Salvia bowleyana HOM05D005235 ORTHO05D006938 6.1e-195 684.5 433 81.3
Sc01g0007490 Simmondsia chinensis HOM05D005235 ORTHO05D006938 6.1e-195 684.5 492 70.9
Migut.N01688 Erythranthe guttata HOM05D005235 ORTHO05D006938 7.9e-195 684.1 499 72.1
COL.COLO4_17457 Corchorus olitorius HOM05D005235 ORTHO05D000503 5.2e-194 681.4 432 77.8
Eucgr.I01565 Eucalyptus grandis HOM05D005235 ORTHO05D006938 8.8e-194 680.6 455 75.2
Gohir.A01G046600 Gossypium hirsutum HOM05D005235 ORTHO05D006938 1.1e-193 680.2 432 77.1
Duzib213G0463 Durio zibethinus HOM05D005235 ORTHO05D006938 1.5e-193 679.9 490 71.0
CSS0000006 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.6e-193 679.1 449 77.5
CSS0008907 Camellia sinensis var. sinensis HOM05D005235 ORTHO05D006938 2.6e-193 679.1 449 77.5
Migut.O00424 Erythranthe guttata HOM05D005235 ORTHO05D006938 3.3e-193 678.7 498 71.7
Gohir.D01G037300 Gossypium hirsutum HOM05D005235 ORTHO05D006938 5.7e-193 677.9 498 69.5
Nn6g33287 Nelumbo nucifera HOM05D005235 ORTHO05D006938 7.4e-193 677.6 474 74.1
TAR626G0946 Trochodendron aralioides HOM05D005235 ORTHO05D006938 7.4e-193 677.6 501 70.5
EL10Ac7g16931 Beta vulgaris HOM05D005235 ORTHO05D006938 8.2e-192 674.1 430 77.2
Gorai.002G045400 Gossypium raimondii HOM05D005235 ORTHO05D006938 8.2e-192 674.1 491 70.5
AUR62033498 Chenopodium quinoa HOM05D005235 ORTHO05D006938 1.8e-191 672.9 428 76.9
THA.LOC104820931 Tarenaya hassleriana HOM05D005235 ORTHO05D006938 3.1e-191 672.2 467 71.3
Potri.014G140400 Populus trichocarpa HOM05D005235 ORTHO05D006938 5.3e-191 671.4 508 68.9
Prupe.1G572900 Prunus persica HOM05D005235 ORTHO05D006938 5.3e-191 671.4 493 70.0
FvH4_6g39550 Fragaria vesca HOM05D005235 ORTHO05D006938 7.0e-191 671.0 429 77.2
Glyma.14G202100 Glycine max HOM05D005235 ORTHO05D006938 7.0e-191 671.0 434 77.9
Sabra14G0105800 Salix brachista HOM05D005235 ORTHO05D006938 9.1e-191 670.6 512 68.6
RcHm_v2.0_Chr7g0221241 Rosa chinensis HOM05D005235 ORTHO05D006938 2.0e-190 669.5 430 77.2
Lsat_1_v5_gn_6_15261 Lactuca sativa HOM05D005235 ORTHO05D006938 2.6e-190 669.1 481 70.5
Ah.08g210620 Amaranthus hybridus HOM05D005235 ORTHO05D006938 5.9e-190 667.9 428 77.1
Peaxi162Scf01038g00005 Petunia axillaris HOM05D005235 ORTHO05D006938 5.9e-190 667.9 512 68.0
Aqoxy1G00862 Aquilegia oxysepala HOM05D005235 ORTHO05D006938 1.0e-189 667.2 504 69.2
Thecc.07G135900 Theobroma cacao HOM05D005235 ORTHO05D006938 1.0e-189 667.2 425 77.2
ClCG07G017190 Citrullus lanatus HOM05D005235 ORTHO05D006938 2.9e-189 665.6 432 76.9
Sopen07g004450 Solanum pennellii HOM05D005235 ORTHO05D006938 2.9e-189 665.6 448 75.4
AUR62028546 Chenopodium quinoa HOM05D005235 ORTHO05D006938 5.0e-189 664.8 428 75.7
Solyc07g008530.1 Solanum lycopersicum HOM05D005235 ORTHO05D006938 8.5e-189 664.1 516 68.4
SGA_v2.0_scaffold68G22803 Striga asiatica HOM05D005235 ORTHO05D006938 8.5e-189 664.1 507 70.2
MD08G1236200 Malus domestica HOM05D005235 ORTHO05D006938 1.1e-188 663.7 496 69.4
TPR.G24949 Trifolium pratense HOM05D005235 ORTHO05D006938 1.9e-188 662.9 510 68.0
Lalb_Chr15g0085971 Lupinus albus HOM05D005235 ORTHO05D006938 3.2e-188 662.1 440 75.7
Manes.04G096400 Manihot esculenta HOM05D005235 ORTHO05D006938 3.2e-188 662.1 458 73.8
FAN13G2026 Fragaria x ananassa HOM05D005235 ORTHO05D006938 7.2e-188 661.0 490 68.8
CANSAT21G0039 Cannabis sativa HOM05D005235 ORTHO05D006938 9.4e-188 660.6 446 75.3
MD15G1428200 Malus domestica HOM05D005235 ORTHO05D006938 9.4e-188 660.6 494 69.0
Haze_25416 Corylus avellana HOM05D005235 ORTHO05D006938 1.2e-187 660.2 429 76.5
Ca_15026_v3 Cicer arietinum L. HOM05D005235 ORTHO05D006938 3.6e-187 658.7 511 68.1
CsaV3_4G004390 Cucumis sativus L. HOM05D005235 ORTHO05D006938 3.6e-187 658.7 432 76.4
FvH4_5g28930 Fragaria vesca HOM05D005235 ORTHO05D006938 3.6e-187 658.7 494 68.0
BcaC01g04429 Brassica carinata HOM05D005235 ORTHO05D006938 4.7e-187 658.3 450 72.4
BNapus_Darmor_BZH_scaffold_122p00160 Brassica napus HOM05D005235 ORTHO05D006938 4.7e-187 658.3 431 74.5
BolC3t16290H Brassica oleracea HOM05D005235 ORTHO05D006938 4.7e-187 658.3 450 72.4
Nitab4.5_0000949g0050 Nicotiana tabacum HOM05D005235 ORTHO05D006938 4.7e-187 658.3 466 72.1
PGSC0003DMG400022992 Solanum tuberosum HOM05D005235 ORTHO05D006938 4.7e-187 658.3 516 68.4
Sed0026739 Sechium edule HOM05D005235 ORTHO05D006938 6.1e-187 657.9 500 68.2
arahy.Tifrunner.gnm1.ann1.0Z73T7 Arachis hypogaea HOM05D005235 ORTHO05D006938 8.0e-187 657.5 434 75.8
MELO3C017627.2 Cucumis melo HOM05D005235 ORTHO05D006938 8.0e-187 657.5 459 72.8
BNapus_Darmor_BZH_scaffold_99p00190 Brassica napus HOM05D005235 ORTHO05D006938 1.0e-186 657.1 431 74.5
PSO566G0178 Papaver somniferum HOM05D005235 ORTHO05D006938 1.4e-186 656.8 501 66.9
Lj6g0011193 Lotus japonicus HOM05D005235 ORTHO05D006938 1.8e-186 656.4 442 75.3
unitig_22.g5329 Utricularia gibba HOM05D005235 ORTHO05D006938 1.8e-186 656.4 430 77.4
BraA01t04625Z Brassica rapa HOM05D005235 ORTHO05D006938 2.3e-186 656.0 431 74.5
Hund00893 Selenicereus undatus HOM05D005235 ORTHO05D006938 2.3e-186 656.0 427 75.2
CAN.G192.3 Capsicum annuum HOM05D005235 ORTHO05D006938 3.0e-186 655.6 514 69.1
CARHR076660 Cardamine hirsuta HOM05D005235 ORTHO05D006938 3.0e-186 655.6 469 70.4
AL3G12040 Arabidopsis lyrata HOM05D005235 ORTHO05D006938 4.0e-186 655.2 502 67.7
HanXRQChr08g0226751 Helianthus annuus HOM05D005235 ORTHO05D006938 4.0e-186 655.2 432 75.7
A03p33070 Brassica napus HOM05D005235 ORTHO05D006938 5.2e-186 654.8 431 74.2
Cfa002235 Carpinus fangiana HOM05D005235 ORTHO05D006938 5.2e-186 654.8 429 76.0
AT3G02660 Arabidopsis thaliana HOM05D005235 ORTHO05D006938 1.2e-185 653.7 469 70.1
arahy.Tifrunner.gnm1.ann1.354T1Y Arachis hypogaea HOM05D005235 ORTHO05D006938 1.2e-185 653.7 443 74.9
BolC1t05885H Brassica oleracea HOM05D005235 ORTHO05D006938 1.2e-185 653.7 432 73.8
Nitab4.5_0000491g0060 Nicotiana tabacum HOM05D005235 ORTHO05D006938 1.2e-185 653.7 467 71.7
BraA03t12477Z Brassica rapa HOM05D005235 ORTHO05D006938 2.6e-185 652.5 431 73.8
Glyma.02G234500 Glycine max HOM05D005235 ORTHO05D006938 3.3e-185 652.1 442 75.1
CiPaw.03G253600 Carya illinoinensis HOM05D005235 ORTHO05D006938 4.4e-185 651.7 429 76.0
ECA233G3576 Erigeron canadensis HOM05D005235 ORTHO05D006938 1.3e-184 650.2 467 71.1
Thhalv10020578m.g Eutrema salsugineum HOM05D005235 ORTHO05D006938 1.3e-184 650.2 449 71.9
Lj3g0002085 Lotus japonicus HOM05D005235 ORTHO05D006938 1.3e-184 650.2 447 74.5
PSO173G0108 Papaver somniferum HOM05D005235 ORTHO05D006938 1.3e-184 650.2 504 66.3
Psat5g150600 Pisum sativum HOM05D005235 ORTHO05D006938 1.3e-184 650.2 506 67.6
FAN18G1214 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.2e-184 649.4 488 67.8
TWI32G1353 Tripterygium wilfordii HOM05D005235 ORTHO05D006938 2.2e-184 649.4 495 67.7
VMungo0647G1084 Vigna mungo HOM05D005235 ORTHO05D006938 2.2e-184 649.4 455 72.5
Medtr3g466250 Medicago truncatula HOM05D005235 ORTHO05D006938 3.7e-184 648.7 510 67.1
Medtr4g121070 Medicago truncatula HOM05D005235 ORTHO05D006938 6.3e-184 647.9 502 67.3
FAN08G3020 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.1e-183 647.1 490 67.8
Atru.BG.29.p Acer truncatum HOM05D005235 ORTHO05D006938 1.4e-183 646.7 429 76.2
Phvul.008G249300 Phaseolus vulgaris HOM05D005235 ORTHO05D006938 2.4e-183 646.0 450 71.3
Ciclev10015023m.g Citrus clementina HOM05D005235 ORTHO05D006938 1.2e-182 643.7 475 69.9
Sp3g01700 Schrenkiella parvula HOM05D005235 ORTHO05D006938 1.6e-182 643.3 469 68.7
Aa31LG5G13140 Aethionema arabicum HOM05D005235 ORTHO05D006938 2.0e-182 642.9 438 71.9
DCAR_005998 Daucus carota HOM05D005235 ORTHO05D006938 2.7e-182 642.5 488 68.4
Actinidia37705 Actinidia chinensis HOM05D005235 ORTHO05D006938 3.5e-182 642.1 499 69.1
QL10p019537 Quercus lobata HOM05D005235 ORTHO05D006938 2.9e-181 639.0 426 75.4
MBI04_g19169_MAGBIO Magnolia biondii HOM05D005235 ORTHO05D006938 6.1e-179 631.3 578 59.0
ATR0021G047 Amborella trichopoda HOM05D005235 ORTHO05D006938 2.6e-177 625.9 440 70.5
Lj8A333T11 Lonicera japonica HOM05D005235 ORTHO05D006938 2.6e-177 625.9 478 68.8
CDE05G0570 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 4.4e-177 625.2 437 70.7
CDE05G2156 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 1.3e-176 623.6 438 70.8
Os01g0500900 Oryza sativa ssp. japonica HOM05D005235 ORTHO05D006938 4.1e-175 618.6 485 66.4
Zm00001eb080850 Zea mays HOM05D005235 ORTHO05D006938 4.7e-171 605.1 494 63.8
Nitab4.5_0004867g0070 Nicotiana tabacum HOM05D000907 ORTHO05D000753 2.6e-169 599.4 443 71.3
Pp3c3_3070 Physcomitrium patens HOM05D005235 ORTHO05D006938 2.7e-166 589.3 448 65.6
AagrBONN_evm.TU.Sc2ySwM_368.429 Anthoceros agrestis HOM05D005235 ORTHO05D006938 3.3e-164 582.4 436 65.8
Mapoly0163s0012 Marchantia polymorpha HOM05D005235 ORTHO05D006938 3.3e-164 582.4 447 63.8
BcaB04g19392 Brassica carinata HOM05D005235 ORTHO05D006938 2.9e-160 569.3 443 66.1
SMO200G0177 Selaginella moellendorffii HOM05D005235 ORTHO05D006938 4.9e-160 568.5 440 62.0
MCO13G625 Micromonas commoda HOM05D005235 ORTHO05D006938 3.4e-145 519.2 446 57.6
SEGI_38902 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 7.5e-145 518.1 373 68.4
TAR633G2758 Trochodendron aralioides HOM05D005235 ORTHO05D006938 8.3e-144 514.6 309 82.5
Cre13.g606050 Chlamydomonas reinhardtii HOM05D005235 ORTHO05D006938 1.7e-141 506.9 446 57.8
GSVIVG01023528001 Vitis vinifera HOM05D005235 ORTHO05D006938 1.6e-139 500.4 429 62.7
FAN05G2159 Fragaria x ananassa HOM05D005235 ORTHO05D006938 2.1e-139 500.0 424 61.8
PRCOL_00003633 Prasinoderma coloniale HOM05D005235 ORTHO05D006938 5.1e-133 478.8 510 50.6
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 1.5e-132 477.2 431 60.3
CBR_g10848 Chara braunii HOM05D005235 ORTHO05D006938 1.0e-125 454.5 480 50.2
arahy.Tifrunner.gnm1.ann1.8HX8KM Arachis hypogaea HOM05D005235 ORTHO05D006938 1.1e-122 444.5 411 59.6
Actinidia19541 Actinidia chinensis HOM05D005235 ORTHO05D006938 1.5e-116 424.1 495 51.9
FAN04G0607 Fragaria x ananassa HOM05D005235 ORTHO05D006938 8.2e-99 365.2 233 76.8
Dinv11903 Davidia involucrata HOM05D005235 ORTHO05D006938 2.8e-83 313.5 414 47.6
BolC1t05886H Brassica oleracea HOM05D005235 ORTHO05D006938 7.0e-82 308.9 395 46.6
Pp3s58_130 Physcomitrium patens HOM05D005235 ORTHO05D006938 1.1e-79 301.6 425 38.4
C03p40250 Brassica napus HOM05D005235 ORTHO05D006938 6.1e-78 295.8 206 71.4
HPP92_015556 Vanilla planifolia HOM05D005235 ORTHO05D006938 1.5e-76 291.2 251 58.2
Oeu046079.2 Olea europaea HOM05D002040 ORTHO05D002502 1.9e-71 274.2 400 46.2
BNapus_Darmor_BZH_scaffold_133p00140 Brassica napus HOM05D005235 ORTHO05D032674 1.5e-68 264.6 229 61.1
BcaC09g47648 Brassica carinata HOM05D005235 ORTHO05D032674 7.0e-66 255.8 334 47.6
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 3.6e-62 243.4 491 32.0
HPP92_015557 Vanilla planifolia HOM05D005235 ORTHO05D006938 3.0e-61 240.4 174 70.1
Haze_27256 Corylus avellana HOM05D005235 ORTHO05D006938 3.1e-58 230.3 305 40.0
FAN04G0381 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.1e-55 221.9 155 71.0
CDE05G3313 Ceratophyllum demersum HOM05D005235 ORTHO05D006938 8.6e-40 169.1 146 59.6
BraA01t04657Z Brassica rapa HOM05D005235 ORTHO05D032674 5.2e-37 159.8 131 64.1
FAN09G2876 Fragaria x ananassa HOM05D005235 ORTHO05D006938 1.0e-32 145.6 96 70.8
Oeu059313.1 Olea europaea HOM05D005235 ORTHO05D006938 8.9e-29 132.5 124 61.3
SEGI_05348 Sequoiadendron giganteum HOM05D005235 ORTHO05D006938 6.6e-24 116.3 67 80.6
TAR633G1966 Trochodendron aralioides HOM05D005235 ORTHO05D006938 2.1e-22 111.3 105 60.0
Thecc.07G136200 Theobroma cacao HOM05D005235 ORTHO05D006938 4.4e-20 103.6 68 72.1
Oeu038380.1 Olea europaea HOM05D007843 ORTHO05D003639 1.3e-19 102.1 102 55.9
arahy.Tifrunner.gnm1.ann1.J19R9Y Arachis hypogaea HOM05D005235 ORTHO05D038945 7.1e-18 96.3 57 82.5
SEGI_33043 Sequoiadendron giganteum HOM05D005235 ORTHO05D008256 2.1e-17 94.7 70 61.4
Nn1g04561 Nelumbo nucifera HOM05D005235 ORTHO05D038945 2.5e-15 87.8 73 64.4
BNapus_Darmor_BZH_scaffold_119p00120 Brassica napus HOM05D005235 ORTHO05D006938 5.3e-13 80.1 49 75.5
BNapus_Darmor_BZH_scaffold_97p00310 Brassica napus HOM05D005235 ORTHO05D006938 5.3e-13 80.1 49 75.5
BolC1t05887H Brassica oleracea HOM05D005235 ORTHO05D014124 7.1e-10 69.7 73 54.8
SEGI_20498 Sequoiadendron giganteum HOM05D037692 ORTHO05D385547 2.8e-06 57.8 47 59.6


User provided reference genes

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