Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu058323.4 Olea europaea HOM05D000283 ORTHO05D005391 2.7e-206 721.8 384 100.0
Oeu050639.2 Olea europaea HOM05D000283 ORTHO05D005391 4.0e-125 452.2 368 73.4
Migut.F01533 Erythranthe guttata HOM05D000283 ORTHO05D005391 1.0e-88 331.3 416 50.5
SalBow6G0521 Salvia bowleyana HOM05D000283 ORTHO05D005391 3.6e-86 322.8 387 50.6
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 8.1e-86 321.6 375 51.7
Dinv31389 Davidia involucrata HOM05D000283 ORTHO05D005391 2.7e-81 306.6 437 47.4
CSS0009141 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 6.4e-75 285.4 411 49.4
Sopen05g033370 Solanum pennellii HOM05D000283 ORTHO05D005391 7.1e-74 282.0 373 50.9
Atru.chr12.592 Acer truncatum HOM05D000283 ORTHO05D005391 2.7e-73 280.0 378 47.4
Lj8C92G16 Lonicera japonica HOM05D000283 ORTHO05D005391 1.0e-72 278.1 377 49.1
CiPaw.02G178600 Carya illinoinensis HOM05D000283 ORTHO05D005391 1.3e-72 277.7 372 47.8
Nitab4.5_0010706g0030 Nicotiana tabacum HOM05D000283 ORTHO05D005391 1.5e-71 274.2 359 51.3
RcHm_v2.0_Chr1g0365011 Rosa chinensis HOM05D000283 ORTHO05D005391 1.5e-71 274.2 386 49.5
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 4.3e-71 272.7 379 45.1
Nitab4.5_0000914g0100 Nicotiana tabacum HOM05D000283 ORTHO05D005391 2.1e-70 270.4 359 50.1
Thecc.10G063000 Theobroma cacao HOM05D000283 ORTHO05D005391 2.8e-70 270.0 374 45.5
Haze_16972 Corylus avellana HOM05D000283 ORTHO05D005391 3.6e-70 269.6 379 45.4
MD07G1184700 Malus domestica HOM05D000283 ORTHO05D005391 6.2e-70 268.9 442 43.0
Duzib128G1699 Durio zibethinus HOM05D000283 ORTHO05D005391 3.1e-69 266.5 377 45.4
Glyma.10G292300 Glycine max HOM05D000283 ORTHO05D005391 8.9e-69 265.0 378 45.0
GSVIVG01032627001 Vitis vinifera HOM05D000283 ORTHO05D005391 1.5e-68 264.2 325 45.8
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 2.0e-68 263.8 387 45.0
Glyma.20G242100 Glycine max HOM05D000283 ORTHO05D005391 2.6e-68 263.5 378 44.2
QL08p057534 Quercus lobata HOM05D000283 ORTHO05D005391 5.8e-68 262.3 387 45.2
TAR633G1628 Trochodendron aralioides HOM05D000283 ORTHO05D005391 1.7e-67 260.8 373 44.8
Gohir.A10G208900 Gossypium hirsutum HOM05D000283 ORTHO05D005391 2.9e-67 260.0 377 46.9
Gohir.D10G217200 Gossypium hirsutum HOM05D000283 ORTHO05D005391 4.9e-67 259.2 377 46.9
Gorai.011G242800 Gossypium raimondii HOM05D000283 ORTHO05D005391 4.9e-67 259.2 377 46.9
Manes.07G106300 Manihot esculenta HOM05D000283 ORTHO05D005391 6.4e-67 258.8 378 48.1
Solyc05g054910.3 Solanum lycopersicum HOM05D000283 ORTHO05D005391 1.4e-66 257.7 400 47.2
Ciclev10030610m.g Citrus clementina HOM05D000283 ORTHO05D005391 3.2e-66 256.5 377 48.3
Sabra08G0033800 Salix brachista HOM05D000283 ORTHO05D005391 3.2e-66 256.5 372 43.8
Cc02_g08650 Coffea canephora HOM05D000283 ORTHO05D005391 1.2e-65 254.6 430 42.1
MELO3C023808.2 Cucumis melo HOM05D000283 ORTHO05D005391 1.2e-65 254.6 378 44.4
Duzib106G1632 Durio zibethinus HOM05D000283 ORTHO05D005391 1.6e-65 254.2 375 44.5
VMungo0720G2546 Vigna mungo HOM05D000283 ORTHO05D005391 2.1e-65 253.8 378 43.1
CsaV3_5G006520 Cucumis sativus L. HOM05D000283 ORTHO05D005391 4.6e-65 252.7 376 44.1
Cpa.g.sc1.303 Carica papaya HOM05D000283 ORTHO05D005391 1.0e-64 251.5 374 46.0
FAN06G1635 Fragaria x ananassa HOM05D000283 ORTHO05D005391 5.1e-64 249.2 389 46.3
Sed0010822 Sechium edule HOM05D000283 ORTHO05D005391 5.1e-64 249.2 379 42.7
Nn2g10554 Nelumbo nucifera HOM05D000283 ORTHO05D005391 6.6e-64 248.8 437 41.0
ClCG02G013670 Citrullus lanatus HOM05D000283 ORTHO05D005391 8.7e-64 248.4 373 46.4
FvH4_7g20770 Fragaria vesca HOM05D000283 ORTHO05D005391 8.7e-64 248.4 389 46.8
Lj5g0022773 Lotus japonicus HOM05D000283 ORTHO05D005391 2.5e-63 246.9 379 42.2
FAN06G4940 Fragaria x ananassa HOM05D000283 ORTHO05D005391 7.3e-63 245.4 389 45.8
Medtr3g073080 Medicago truncatula HOM05D000283 ORTHO05D005391 2.1e-62 243.8 392 46.7
Peaxi162Scf00015g02711 Petunia axillaris HOM05D000283 ORTHO05D005391 2.1e-62 243.8 384 46.9
CANSAT56G0145 Cannabis sativa HOM05D000283 ORTHO05D005391 6.2e-62 242.3 410 40.7
Sed0023338 Sechium edule HOM05D000283 ORTHO05D005391 1.1e-61 241.5 374 42.8
Prupe.2G224600 Prunus persica HOM05D000283 ORTHO05D005391 1.4e-61 241.1 455 38.0
unitig_749.g14014 Utricularia gibba HOM05D000283 ORTHO05D005391 1.4e-61 241.1 376 43.9
DCAR_005047 Daucus carota HOM05D000283 ORTHO05D005391 1.8e-61 240.7 389 40.6
MD01G1117300 Malus domestica HOM05D000283 ORTHO05D005391 2.4e-61 240.4 443 38.8
TPR.G10417 Trifolium pratense HOM05D000283 ORTHO05D005391 1.2e-60 238.0 386 42.0
TAR636G1569 Trochodendron aralioides HOM05D000283 ORTHO05D005391 2.0e-60 237.3 374 42.8
arahy.Tifrunner.gnm1.ann1.79HMAA Arachis hypogaea HOM05D000283 ORTHO05D005391 3.4e-60 236.5 383 42.8
Hma1.2p1_0207F.1_g087980 Hydrangea macrophylla HOM05D000283 ORTHO05D005391 3.4e-60 236.5 446 39.0
arahy.Tifrunner.gnm1.ann1.M4B7ES Arachis hypogaea HOM05D000283 ORTHO05D005391 9.9e-60 235.0 383 42.8
TWI38G2098 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 1.7e-59 234.2 422 38.4
CAN.G1602.11 Capsicum annuum HOM05D000283 ORTHO05D005391 6.4e-59 232.3 335 45.4
Potri.008G047700 Populus trichocarpa HOM05D000283 ORTHO05D005391 4.2e-58 229.6 372 41.9
Aqoxy5G01311 Aquilegia oxysepala HOM05D000283 ORTHO05D005391 5.4e-58 229.2 458 37.8
TWI15G0630 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 3.3e-55 219.9 420 37.4
AUR62042665 Chenopodium quinoa HOM05D000283 ORTHO05D005391 4.3e-55 219.5 341 41.6
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 2.1e-54 217.2 377 40.1
MBI05_g22074_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 2.8e-54 216.9 323 45.8
Sabra10G0165400 Salix brachista HOM05D000283 ORTHO05D005391 2.8e-54 216.9 376 40.7
Sc20g0002350 Simmondsia chinensis HOM05D000283 ORTHO05D005391 1.1e-53 214.9 390 38.5
HanXRQChr15g0496771 Helianthus annuus HOM05D000283 ORTHO05D005391 1.8e-53 214.2 391 41.9
Ah.16g107830 Amaranthus hybridus HOM05D000283 ORTHO05D005391 3.1e-53 213.4 323 41.5
Lalb_Chr21g0307161 Lupinus albus HOM05D000283 ORTHO05D005391 1.5e-52 211.1 379 39.3
THA.LOC104809997 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 7.6e-52 208.8 389 39.1
AUR62025540 Chenopodium quinoa HOM05D000283 ORTHO05D005391 9.9e-52 208.4 333 41.1
Hund28801 Selenicereus undatus HOM05D000283 ORTHO05D005391 3.2e-50 203.4 357 39.8
Hund28802 Selenicereus undatus HOM05D000283 ORTHO05D005391 3.2e-50 203.4 357 39.8
THA.LOC104824248 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 6.7e-48 195.7 389 37.8
Manes.10G039400 Manihot esculenta HOM05D000283 ORTHO05D005391 1.1e-47 194.9 339 41.6
Potri.010G213700 Populus trichocarpa HOM05D000283 ORTHO05D005391 1.5e-47 194.5 280 44.6
COL.COLO4_05804 Corchorus olitorius HOM05D000283 ORTHO05D005391 1.6e-46 191.0 411 36.5
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 1.6e-46 191.0 384 39.8
SGA_v2.0_scaffold291G47345 Striga asiatica HOM05D000283 ORTHO05D005391 3.7e-46 189.9 376 42.8
BcaC02g12050 Brassica carinata HOM05D000283 ORTHO05D005391 6.2e-46 189.1 386 38.6
C04p08450 Brassica napus HOM05D000283 ORTHO05D005391 6.2e-46 189.1 386 38.6
AT2G39340 Arabidopsis thaliana HOM05D000283 ORTHO05D005391 1.1e-45 188.3 406 37.7
PSO339G6458 Papaver somniferum HOM05D000283 ORTHO05D005391 1.4e-45 188.0 481 32.0
ECA232G0450 Erigeron canadensis HOM05D000283 ORTHO05D005391 2.4e-45 187.2 407 38.6
Aa31LG5G20290 Aethionema arabicum HOM05D000283 ORTHO05D005391 4.5e-44 183.0 389 36.8
ATR0681G328 Amborella trichopoda HOM05D000283 ORTHO05D005391 1.3e-43 181.4 379 35.6
BolC4t22443H Brassica oleracea HOM05D000283 ORTHO05D005391 6.5e-43 179.1 381 41.5
EL10Ac2g03504 Beta vulgaris HOM05D000283 ORTHO05D005391 1.4e-42 177.9 325 37.8
CARHR134130 Cardamine hirsuta HOM05D000283 ORTHO05D005391 1.9e-42 177.6 399 37.6
PGR142G1216 Punica granatum HOM05D000283 ORTHO05D005391 5.5e-42 176.0 399 34.1
Eucgr.G02777 Eucalyptus grandis HOM05D000283 ORTHO05D005391 1.6e-41 174.5 362 39.0
Sp4g21650 Schrenkiella parvula HOM05D000283 ORTHO05D005391 2.3e-40 170.6 384 37.2
SpUn0018_0020 Schrenkiella parvula HOM05D000283 ORTHO05D005391 2.3e-40 170.6 384 37.2
A05p07060 Brassica napus HOM05D000283 ORTHO05D005391 3.9e-40 169.9 384 36.5
BraA05t19671Z Brassica rapa HOM05D000283 ORTHO05D005391 3.9e-40 169.9 384 36.5
Thhalv10016180m.g Eutrema salsugineum HOM05D000283 ORTHO05D005391 3.9e-40 169.9 387 36.4
CDE09G1073 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 6.7e-40 169.1 415 34.7
PSO384G3825 Papaver somniferum HOM05D000283 ORTHO05D005391 6.7e-40 169.1 435 30.8
Psat6g239040 Pisum sativum HOM05D000283 ORTHO05D005391 2.4e-37 160.6 204 46.6
SHI28193 Sapria himalayana HOM05D000283 ORTHO05D005391 3.1e-37 160.2 412 32.5
AL4G36680 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 4.1e-37 159.8 386 34.7
BolC4t28220H Brassica oleracea HOM05D000283 ORTHO05D005391 5.3e-37 159.5 384 34.6
BcaC02g07413 Brassica carinata HOM05D000283 ORTHO05D005391 2.0e-36 157.5 383 35.5
C04p67220 Brassica napus HOM05D000283 ORTHO05D005391 2.0e-36 157.5 383 35.5
BcaB02g09134 Brassica carinata HOM05D000283 ORTHO05D005391 1.6e-33 147.9 292 38.7
SEGI_11289 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 3.9e-32 143.3 364 34.6
A04p30550 Brassica napus HOM05D000283 ORTHO05D005391 5.1e-32 142.9 380 34.7
BraA04t18452Z Brassica rapa HOM05D000283 ORTHO05D005391 1.1e-31 141.7 380 34.5
BcaB06g29078 Brassica carinata HOM05D000283 ORTHO05D005391 1.5e-31 141.4 293 39.2
AL5G26090 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 5.7e-31 139.4 433 32.6
Phvul.007G008100 Phaseolus vulgaris HOM05D000283 ORTHO05D005391 6.3e-30 136.0 281 35.2
TAR381G1264 Trochodendron aralioides HOM05D000283 ORTHO05D005391 4.1e-29 133.3 166 49.4
CiPaw.01G279700 Carya illinoinensis HOM05D000283 ORTHO05D005391 1.4e-26 124.8 170 45.9
Lalb_Chr02g0143871 Lupinus albus HOM05D000283 ORTHO05D005391 1.6e-25 121.3 93 64.5
CAN.G10752.1 Capsicum annuum HOM05D000283 ORTHO05D005391 2.7e-25 120.6 163 46.6
HPP92_015567 Vanilla planifolia HOM05D000283 ORTHO05D005391 2.7e-25 120.6 345 32.2
TAR381G0169 Trochodendron aralioides HOM05D000283 ORTHO05D005391 1.0e-24 118.6 109 58.7
Zm00001eb289820 Zea mays HOM05D000283 ORTHO05D005391 1.8e-24 117.9 333 30.0
Zm00001eb351500 Zea mays HOM05D000283 ORTHO05D005391 2.3e-24 117.5 336 31.5
Carub.0004s2138 Capsella rubella HOM05D000283 ORTHO05D005391 3.7e-22 110.2 176 40.3
CDE02G4519 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 1.5e-20 104.8 340 28.8
Mapoly0013s0152 Marchantia polymorpha HOM05D000283 ORTHO05D005391 1.7e-19 101.3 350 32.0
Pp3c1_11990 Physcomitrium patens HOM05D000283 ORTHO05D005391 3.2e-18 97.1 382 30.6
CiPaw.01G279800 Carya illinoinensis HOM05D000283 ORTHO05D005391 1.2e-17 95.1 73 64.4
Os01g0836400 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 7.9e-17 92.4 380 28.2
AagrBONN_evm.TU.Sc2ySwM_117.607 Anthoceros agrestis HOM05D000283 ORTHO05D005391 4.1e-13 80.1 387 29.7
PSO339G3701 Papaver somniferum HOM05D000283 ORTHO05D005391 2.6e-12 77.4 334 28.1
CBR_g53551 Chara braunii HOM05D000283 ORTHO05D005391 1.3e-11 75.1 97 46.4
Os05g0462600 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 1.5e-10 71.6 329 26.7
Nn2g12827 Nelumbo nucifera HOM05D000283 ORTHO05D005391 1.2e-09 68.6 76 53.9
Pp3c2_24860 Physcomitrium patens HOM05D000283 ORTHO05D005391 1.2e-09 68.6 387 26.1
Actinidia29199 Actinidia chinensis HOM05D000283 ORTHO05D005391 4.8e-06 56.6 35 71.4


User provided reference genes

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