Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056817.1 Olea europaea HOM05D003763 ORTHO05D004315 3.6e-167 591.7 332 100.0
MSTRG.13805 Avicennia marina HOM05D003763 ORTHO05D004315 1.4e-131 473.4 334 81.7
Migut.E01271 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.4e-131 471.5 332 82.2
Migut.E01022 Erythranthe guttata HOM05D003763 ORTHO05D004315 1.2e-130 470.3 332 81.9
SalBow6G0972 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.6e-130 469.9 332 81.9
Oeu021144.1 Olea europaea HOM05D003763 ORTHO05D004315 7.9e-130 467.6 290 91.7
Dinv37708 Davidia involucrata HOM05D003763 ORTHO05D004315 2.5e-128 462.6 332 81.0
Lsat_1_v5_gn_6_78800 Lactuca sativa HOM05D003763 ORTHO05D004315 2.8e-127 459.1 332 79.5
Sopen08g028400 Solanum pennellii HOM05D003763 ORTHO05D004315 1.4e-126 456.8 332 80.1
Migut.A00895 Erythranthe guttata HOM05D003763 ORTHO05D004315 5.3e-126 454.9 327 81.3
Manes.01G070000 Manihot esculenta HOM05D003763 ORTHO05D004315 5.3e-126 454.9 332 79.2
CSS0018103 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 1.2e-125 453.8 333 77.5
PGSC0003DMG400022731 Solanum tuberosum HOM05D003763 ORTHO05D004315 2.9e-124 449.1 332 78.3
GSVIVG01019890001 Vitis vinifera HOM05D003763 ORTHO05D004315 3.8e-124 448.7 333 77.8
Nitab4.5_0010547g0050 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.4e-123 446.8 336 78.9
Peaxi162Scf00102g01354 Petunia axillaris HOM05D003763 ORTHO05D004315 3.2e-123 445.7 332 78.6
PGSC0003DMG400012494 Solanum tuberosum HOM05D003763 ORTHO05D004315 5.5e-123 444.9 334 79.6
CAN.G981.62 Capsicum annuum HOM05D003763 ORTHO05D004315 9.3e-123 444.1 337 78.0
Lsat_1_v5_gn_6_8180 Lactuca sativa HOM05D003763 ORTHO05D004315 1.2e-122 443.7 336 76.8
Cfa012069 Carpinus fangiana HOM05D003763 ORTHO05D004315 2.1e-122 443.0 332 75.0
vmacro14015 Vaccinium macrocarpon HOM05D003763 ORTHO05D004315 2.1e-122 443.0 340 76.8
Sopen08g003700 Solanum pennellii HOM05D003763 ORTHO05D004315 4.6e-122 441.8 332 78.3
TAR629G0773 Trochodendron aralioides HOM05D003763 ORTHO05D004315 4.6e-122 441.8 332 75.0
CAN.G1394.10 Capsicum annuum HOM05D003763 ORTHO05D004315 6.0e-122 441.4 333 78.4
DCAR_000890 Daucus carota HOM05D003763 ORTHO05D004315 7.9e-122 441.0 329 78.4
TWI81G0532 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 6.7e-121 438.0 332 75.9
Thecc.03G267900 Theobroma cacao HOM05D003763 ORTHO05D004315 3.3e-120 435.6 332 75.6
Hma1.2p1_0138F.1_g062780 Hydrangea macrophylla HOM05D003763 ORTHO05D004315 4.3e-120 435.3 339 74.6
Lj4g0003870 Lotus japonicus HOM05D003763 ORTHO05D004315 4.3e-120 435.3 333 75.7
Sabra03G0083200 Salix brachista HOM05D003763 ORTHO05D004315 5.6e-120 434.9 333 76.3
Cpa.g.sc29.40 Carica papaya HOM05D003763 ORTHO05D004315 7.4e-120 434.5 332 74.1
Sc22g0000420 Simmondsia chinensis HOM05D003763 ORTHO05D004315 7.4e-120 434.5 332 75.0
Potri.001G113000 Populus trichocarpa HOM05D003763 ORTHO05D004315 1.6e-119 433.3 333 74.5
TAR622G0836 Trochodendron aralioides HOM05D003763 ORTHO05D004315 1.6e-119 433.3 343 74.1
TWI60G0957 Tripterygium wilfordii HOM05D003763 ORTHO05D004315 2.1e-119 433.0 332 75.0
CSS0001568 Camellia sinensis var. sinensis HOM05D003763 ORTHO05D004315 4.8e-119 431.8 327 76.8
Potri.003G119200 Populus trichocarpa HOM05D003763 ORTHO05D004315 4.8e-119 431.8 333 75.4
arahy.Tifrunner.gnm1.ann1.QN4KPS Arachis hypogaea HOM05D003763 ORTHO05D004315 8.2e-119 431.0 340 75.0
COL.COLO4_23800 Corchorus olitorius HOM05D003763 ORTHO05D004315 8.2e-119 431.0 332 75.9
ECA240G4155 Erigeron canadensis HOM05D003763 ORTHO05D004315 1.8e-118 429.9 336 75.6
Ca_20236_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 3.1e-118 429.1 334 74.9
Cc08_g13730 Coffea canephora HOM05D003763 ORTHO05D004315 3.1e-118 429.1 329 77.8
HanXRQChr13g0414021 Helianthus annuus HOM05D003763 ORTHO05D004315 3.1e-118 429.1 332 76.2
Sp6g05550 Schrenkiella parvula HOM05D003763 ORTHO05D004315 3.1e-118 429.1 333 74.2
THA.LOC104814132 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 3.1e-118 429.1 332 73.2
Sed0026462 Sechium edule HOM05D003763 ORTHO05D004315 5.3e-118 428.3 334 74.6
Lalb_Chr05g0214701 Lupinus albus HOM05D003763 ORTHO05D004315 9.0e-118 427.6 332 75.6
Phvul.003G213900 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 1.2e-117 427.2 336 75.3
Duzib084G0949 Durio zibethinus HOM05D003763 ORTHO05D004315 2.0e-117 426.4 332 74.4
CANSAT21G0452 Cannabis sativa HOM05D003763 ORTHO05D004315 3.4e-117 425.6 335 73.4
Gohir.D08G195200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.4e-117 425.6 332 74.4
MELO3C014009.2 Cucumis melo HOM05D003763 ORTHO05D004315 4.5e-117 425.2 335 74.6
THA.LOC104806356 Tarenaya hassleriana HOM05D003763 ORTHO05D004315 4.5e-117 425.2 333 74.5
Glyma.05G051300 Glycine max HOM05D003763 ORTHO05D004315 1.0e-116 424.1 335 74.6
CsaV3_3G003430 Cucumis sativus L. HOM05D003763 ORTHO05D004315 1.3e-116 423.7 327 74.3
Ah.12g057870 Amaranthus hybridus HOM05D003763 ORTHO05D004315 1.7e-116 423.3 334 74.6
CiPaw.12G101000 Carya illinoinensis HOM05D003763 ORTHO05D004315 2.2e-116 422.9 335 74.0
Duzib205G0169 Durio zibethinus HOM05D003763 ORTHO05D004315 2.2e-116 422.9 332 75.0
Rhsim07G0096500 Rhododendron simsii HOM05D003763 ORTHO05D004315 2.2e-116 422.9 380 68.9
Glyma.17G133200 Glycine max HOM05D003763 ORTHO05D004315 3.8e-116 422.2 335 73.1
Nn1g01278 Nelumbo nucifera HOM05D003763 ORTHO05D004315 3.8e-116 422.2 327 74.9
VMungo1215G3348 Vigna mungo HOM05D003763 ORTHO05D004315 3.8e-116 422.2 365 69.3
Aqoxy7G00504 Aquilegia oxysepala HOM05D003763 ORTHO05D004315 6.5e-116 421.4 335 73.7
EL10Ac5g12684 Beta vulgaris HOM05D003763 ORTHO05D004315 6.5e-116 421.4 336 74.7
Gorai.004G206000 Gossypium raimondii HOM05D003763 ORTHO05D004315 1.1e-115 420.6 333 73.3
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 4.2e-115 418.7 334 76.0
unitig_52.g17229 Utricularia gibba HOM05D003763 ORTHO05D004315 7.1e-115 417.9 323 77.7
Medtr4g102440 Medicago truncatula HOM05D003763 ORTHO05D004315 1.2e-114 417.2 330 74.2
SalBow1G0491 Salvia bowleyana HOM05D003763 ORTHO05D004315 1.2e-114 417.2 327 77.1
Thhalv10028695m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 2.1e-114 416.4 333 73.6
Hund14702 Selenicereus undatus HOM05D003763 ORTHO05D004315 2.7e-114 416.0 333 73.3
Aa31LG6G4960 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.0e-113 414.1 334 71.0
Sp7g20960 Schrenkiella parvula HOM05D003763 ORTHO05D004315 1.3e-113 413.7 333 71.5
Ciclev10021127m.g Citrus clementina HOM05D003763 ORTHO05D004315 3.9e-113 412.1 334 73.1
BcaC01g04611 Brassica carinata HOM05D003763 ORTHO05D004315 5.1e-113 411.8 333 72.4
C03p35720 Brassica napus HOM05D003763 ORTHO05D004315 5.1e-113 411.8 333 72.4
MD04G1071000 Malus domestica HOM05D003763 ORTHO05D004315 6.7e-113 411.4 335 71.9
Solyc08g080050.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 6.7e-113 411.4 306 79.7
TPR.G37646 Trifolium pratense HOM05D003763 ORTHO05D004315 6.7e-113 411.4 346 70.8
BolC3t15881H Brassica oleracea HOM05D003763 ORTHO05D004315 8.7e-113 411.0 333 72.4
Aa31LG9G10510 Aethionema arabicum HOM05D003763 ORTHO05D004315 1.1e-112 410.6 333 71.8
Nitab4.5_0002886g0120 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.1e-112 410.6 328 68.9
AT4G22890 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.5e-112 410.2 332 71.7
FAN04G0845 Fragaria x ananassa HOM05D003763 ORTHO05D004315 5.7e-112 408.3 337 73.0
Eucgr.D01944 Eucalyptus grandis HOM05D003763 ORTHO05D004315 7.4e-112 407.9 339 70.8
BcaB01g02662 Brassica carinata HOM05D003763 ORTHO05D004315 9.7e-112 407.5 333 72.4
Gorai.008G242200 Gossypium raimondii HOM05D003763 ORTHO05D004315 9.7e-112 407.5 332 71.7
VMungo1215G1438 Vigna mungo HOM05D003763 ORTHO05D004315 9.7e-112 407.5 332 71.4
Sed0016409 Sechium edule HOM05D003763 ORTHO05D004315 1.3e-111 407.1 336 71.1
FvH4_5g01180 Fragaria vesca HOM05D003763 ORTHO05D004315 3.7e-111 405.6 338 72.5
Gohir.D12G226200 Gossypium hirsutum HOM05D003763 ORTHO05D004315 3.7e-111 405.6 332 71.4
Prupe.5G086900 Prunus persica HOM05D003763 ORTHO05D004315 3.7e-111 405.6 333 71.2
Thhalv10025739m.g Eutrema salsugineum HOM05D003763 ORTHO05D004315 4.8e-111 405.2 332 71.4
FAN18G3786 Fragaria x ananassa HOM05D003763 ORTHO05D004315 4.8e-111 405.2 340 72.1
PSO478G4698 Papaver somniferum HOM05D003763 ORTHO05D004315 4.8e-111 405.2 335 71.6
PSO782G5713 Papaver somniferum HOM05D003763 ORTHO05D004315 4.8e-111 405.2 329 72.6
CDE04G2291 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 6.3e-111 404.8 348 69.8
AUR62010559 Chenopodium quinoa HOM05D003763 ORTHO05D004315 6.3e-111 404.8 336 72.3
A03p29510 Brassica napus HOM05D003763 ORTHO05D004315 8.2e-111 404.4 333 71.8
BraA03t12145Z Brassica rapa HOM05D003763 ORTHO05D004315 8.2e-111 404.4 333 71.8
FAN13G2490 Fragaria x ananassa HOM05D003763 ORTHO05D004315 8.2e-111 404.4 338 72.2
Psat4g068320 Pisum sativum HOM05D003763 ORTHO05D004315 8.2e-111 404.4 331 70.4
AUR62017330 Chenopodium quinoa HOM05D003763 ORTHO05D004315 1.1e-110 404.1 336 72.0
Glyma.01G214300 Glycine max HOM05D003763 ORTHO05D004315 1.1e-110 404.1 332 72.3
Phvul.002G152800 Phaseolus vulgaris HOM05D003763 ORTHO05D004315 2.4e-110 402.9 334 71.3
Actinidia27416 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.9e-110 401.4 264 87.5
FAN08G0919 Fragaria x ananassa HOM05D003763 ORTHO05D004315 1.2e-109 400.6 334 72.8
Carub.0007s1839 Capsella rubella HOM05D003763 ORTHO05D004315 2.6e-109 399.4 332 71.1
A03p53850 Brassica napus HOM05D003763 ORTHO05D004315 3.4e-109 399.1 332 70.2
BolC7t45719H Brassica oleracea HOM05D003763 ORTHO05D004315 4.5e-109 398.7 332 69.9
CARHR254330 Cardamine hirsuta HOM05D003763 ORTHO05D004315 5.9e-109 398.3 332 70.5
AL6G46730 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 1.0e-108 397.5 329 70.8
AT4G11960 Arabidopsis thaliana HOM05D003763 ORTHO05D004315 1.3e-108 397.1 328 71.0
arahy.Tifrunner.gnm1.ann1.HFU20B Arachis hypogaea HOM05D003763 ORTHO05D004315 2.2e-108 396.4 336 72.3
C07p52250 Brassica napus HOM05D003763 ORTHO05D004315 2.2e-108 396.4 332 69.6
Solyc08g007770.4 Solanum lycopersicum HOM05D003763 ORTHO05D004315 2.9e-108 396.0 307 78.2
arahy.Tifrunner.gnm1.ann1.RZ3A35 Arachis hypogaea HOM05D003763 ORTHO05D004315 6.5e-108 394.8 337 71.5
A01p14110 Brassica napus HOM05D003763 ORTHO05D004315 6.5e-108 394.8 329 69.6
BraA01t01359Z Brassica rapa HOM05D003763 ORTHO05D004315 6.5e-108 394.8 329 69.6
Carub.0006s3106 Capsella rubella HOM05D003763 ORTHO05D004315 1.1e-107 394.0 329 70.8
ClCG00G002290 Citrullus lanatus HOM05D003763 ORTHO05D004315 1.4e-107 393.7 308 75.0
Medtr5g011220 Medicago truncatula HOM05D003763 ORTHO05D004315 1.4e-107 393.7 312 73.4
RcHm_v2.0_Chr7g0199911 Rosa chinensis HOM05D003763 ORTHO05D004315 7.2e-107 391.3 334 71.6
BcaC09g51065 Brassica carinata HOM05D003763 ORTHO05D004315 1.6e-106 390.2 329 69.0
BcaNung01019 Brassica carinata HOM05D003763 ORTHO05D004315 6.1e-106 388.3 329 69.0
C01p17370 Brassica napus HOM05D003763 ORTHO05D004315 7.9e-106 387.9 329 68.7
BolC1t01675H Brassica oleracea HOM05D003763 ORTHO05D004315 7.9e-106 387.9 329 68.7
BcaNung01664 Brassica carinata HOM05D003763 ORTHO05D004315 2.3e-105 386.3 282 77.3
HanXRQChr03g0084111 Helianthus annuus HOM05D003763 ORTHO05D004315 2.3e-105 386.3 313 73.8
Nitab4.5_0001200g0070 Nicotiana tabacum HOM05D003763 ORTHO05D004315 6.7e-105 384.8 261 76.2
Ca_24565_v3 Cicer arietinum L. HOM05D003763 ORTHO05D004315 2.5e-104 382.9 334 69.2
Lj8C243T4 Lonicera japonica HOM05D003763 ORTHO05D004315 2.2e-103 379.8 266 84.6
PGR031G0886 Punica granatum HOM05D003763 ORTHO05D004315 4.8e-103 378.6 334 71.0
CARHR229930 Cardamine hirsuta HOM05D003763 ORTHO05D004315 6.3e-103 378.3 332 68.7
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 6.3e-103 378.3 332 63.3
Lj2A202G55 Lonicera japonica HOM05D003763 ORTHO05D004315 7.7e-101 371.3 278 76.6
Lj2g0000892 Lotus japonicus HOM05D003763 ORTHO05D004315 5.0e-100 368.6 334 68.0
Zm00001eb064990 Zea mays HOM05D003763 ORTHO05D004315 1.9e-99 366.7 272 76.1
Os03g0857400 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.0e-97 360.9 319 67.7
ATR0661G459 Amborella trichopoda HOM05D003763 ORTHO05D004315 1.8e-97 360.1 267 75.7
arahy.Tifrunner.gnm1.ann1.N69HTX Arachis hypogaea HOM05D003763 ORTHO05D004315 1.8e-97 360.1 340 66.8
BraA03t14454Z Brassica rapa HOM05D003763 ORTHO05D004315 3.0e-97 359.4 308 70.1
Haze_08989 Corylus avellana HOM05D003763 ORTHO05D004315 1.7e-95 353.6 309 68.3
Peaxi162Scf00620g00056 Petunia axillaris HOM05D003763 ORTHO05D004315 2.4e-94 349.7 366 62.0
Actinidia14012 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.9e-93 345.1 232 87.5
ClCG00G000150 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.5e-91 339.7 332 63.6
ClCG10G003400 Citrullus lanatus HOM05D003763 ORTHO05D004315 2.5e-91 339.7 332 63.6
Gohir.A08G176900 Gossypium hirsutum HOM05D003763 ORTHO05D004315 5.5e-91 338.6 236 84.3
AL7G30630 Arabidopsis lyrata HOM05D003763 ORTHO05D004315 3.9e-89 332.4 236 81.8
SEGI_18243 Sequoiadendron giganteum HOM05D003763 ORTHO05D004315 1.9e-83 313.5 272 63.6
unitig_699.g19760 Utricularia gibba HOM05D003763 ORTHO05D004315 2.1e-82 310.1 260 76.9
Mapoly0048s0082 Marchantia polymorpha HOM05D003763 ORTHO05D004315 6.1e-82 308.5 254 69.7
Dinv39038 Davidia involucrata HOM05D003763 ORTHO05D004315 4.4e-80 302.4 236 79.2
Pp3c10_15390 Physcomitrium patens HOM05D003763 ORTHO05D004315 5.7e-80 302.0 304 58.9
CiPaw.11G143200 Carya illinoinensis HOM05D003763 ORTHO05D004315 1.3e-79 300.8 234 76.5
Actinidia05236 Actinidia chinensis HOM05D003763 ORTHO05D004315 6.5e-76 288.5 283 59.7
SMO356G0021 Selaginella moellendorffii HOM05D003763 ORTHO05D004315 1.9e-75 287.0 255 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2619 Anthoceros agrestis HOM05D003763 ORTHO05D004315 4.2e-75 285.8 256 58.2
Psat2g180880 Pisum sativum HOM05D003763 ORTHO05D004315 9.1e-70 268.1 266 66.2
Psat6g136800 Pisum sativum HOM05D003763 ORTHO05D004315 7.7e-69 265.0 201 77.6
Cre07.g340200 Chlamydomonas reinhardtii HOM05D003763 ORTHO05D004315 3.4e-56 223.0 273 49.1
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 1.3e-55 221.1 277 44.0
Zm00001eb065010 Zea mays HOM05D003763 ORTHO05D004315 2.2e-55 220.3 155 72.3
MSTRG.12034 Avicennia marina HOM05D003763 ORTHO05D004315 1.9e-54 217.2 193 75.6
CDE07G1293 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 1.5e-51 207.6 130 79.2
Glyma.12G170600 Glycine max HOM05D003763 ORTHO05D004315 2.0e-48 197.2 155 67.7
Gohir.A12G223632 Gossypium hirsutum HOM05D003763 ORTHO05D004315 1.6e-45 187.6 129 72.1
CDE07G1747 Ceratophyllum demersum HOM05D003763 ORTHO05D004315 4.6e-45 186.0 200 64.0
Gohir.A12G223566 Gossypium hirsutum HOM05D003763 ORTHO05D004315 6.2e-42 175.6 145 63.4
HPP92_014954 Vanilla planifolia HOM05D003763 ORTHO05D004315 1.9e-35 154.1 100 77.0
Actinidia02868 Actinidia chinensis HOM05D003763 ORTHO05D004315 5.6e-35 152.5 266 40.6
Zm00001eb305640 Zea mays HOM05D003763 ORTHO05D004315 9.5e-35 151.8 96 77.1
Lsat_1_v5_gn_8_1701 Lactuca sativa HOM05D003763 ORTHO05D004315 1.5e-32 144.4 87 78.2
TPR.G14577 Trifolium pratense HOM05D003763 ORTHO05D004315 1.4e-30 137.9 108 74.1
Zm00001eb065020 Zea mays HOM05D003763 ORTHO05D004315 6.6e-28 129.0 77 81.8
BcaC02g09855 Brassica carinata HOM05D003763 ORTHO05D004315 9.3e-22 108.6 144 54.9
Pp3c3_19870 Physcomitrium patens HOM05D003763 ORTHO05D004315 1.1e-17 95.1 107 65.4
Os08g0526300 Oryza sativa ssp. japonica HOM05D003763 ORTHO05D004315 1.2e-16 91.7 83 80.7
TPR.G23383 Trifolium pratense HOM05D003424 ORTHO05D004025 9.9e-16 88.6 122 47.5
C04p35880 Brassica napus HOM05D003763 ORTHO05D004315 1.7e-15 87.8 145 51.0
arahy.Tifrunner.gnm1.ann1.AG3Z3P Arachis hypogaea HOM05D003763 ORTHO05D004315 1.4e-09 68.2 93 41.9
CAN.G835.4 Capsicum annuum HOM05D000091 ORTHO05D003679 3.2e-06 57.0 37 81.1
MCO02G269 Micromonas commoda HOM05D066820 ORTHO05D004315 4.2e-06 56.6 98 33.7


User provided reference genes

Program Settings