Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu056255.1 Olea europaea HOM05D005579 ORTHO05D006775 0.0e+00 1895.2 953 100.0
Dinv28443 Davidia involucrata HOM05D005579 ORTHO05D006775 2.8e-220 769.6 835 49.6
Peaxi162Scf00444g00841 Petunia axillaris HOM05D005579 ORTHO05D006775 4.5e-194 682.6 1093 39.7
Cfa008319 Carpinus fangiana HOM05D005579 ORTHO05D006775 2.7e-191 673.3 1040 40.5
QL09p014220 Quercus lobata HOM05D005579 ORTHO05D006775 3.0e-190 669.8 851 45.6
Sopen03g004630 Solanum pennellii HOM05D005579 ORTHO05D006775 1.5e-189 667.5 1073 39.4
Solyc03g025820.3 Solanum lycopersicum HOM05D005579 ORTHO05D006775 1.6e-188 664.1 1079 39.3
TAR367G0001 Trochodendron aralioides HOM05D005579 ORTHO05D006775 4.0e-187 659.4 1096 39.9
Cc02_g02990 Coffea canephora HOM05D005579 ORTHO05D006775 8.4e-185 651.7 852 45.9
Nitab4.5_0000716g0010 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.4e-184 651.0 1070 38.4
Nitab4.5_0009681g0030 Nicotiana tabacum HOM05D005579 ORTHO05D006775 1.5e-181 641.0 1059 38.1
Ciclev10006492m.g Citrus clementina HOM05D005579 ORTHO05D006775 2.8e-180 636.7 1066 38.2
Duzib068G1336 Durio zibethinus HOM05D005579 ORTHO05D006775 2.8e-180 636.7 1086 39.2
CiPaw.04G071000 Carya illinoinensis HOM05D005579 ORTHO05D006775 4.8e-180 636.0 1072 38.2
GSVIVG01028977001 Vitis vinifera HOM05D005579 ORTHO05D006775 5.0e-177 625.9 958 41.3
CAN.G490.30 Capsicum annuum HOM05D005579 ORTHO05D006775 1.4e-176 624.4 848 43.6
TWI23G0169 Tripterygium wilfordii HOM05D005579 ORTHO05D006775 5.3e-171 605.9 1100 37.1
Gorai.008G277600 Gossypium raimondii HOM05D005579 ORTHO05D006775 1.7e-164 584.3 1190 34.4
Gohir.D12G259200 Gossypium hirsutum HOM05D005579 ORTHO05D006775 9.1e-163 578.6 1190 34.1
Nn6g33500 Nelumbo nucifera HOM05D005579 ORTHO05D006775 5.5e-160 569.3 840 42.0
Actinidia32860 Actinidia chinensis HOM05D005579 ORTHO05D006775 5.2e-158 562.8 1063 36.4
Gohir.A12G257850 Gossypium hirsutum HOM05D005579 ORTHO05D006775 2.2e-156 557.4 1170 34.2
Cpa.g.sc107.52 Carica papaya HOM05D005579 ORTHO05D006775 8.8e-150 535.4 1115 35.3
COL.COLO4_14309 Corchorus olitorius HOM05D005579 ORTHO05D006775 7.5e-149 532.3 1084 34.3
CSS0047196 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 3.1e-147 526.9 590 51.0
CSS0017636 Camellia sinensis var. sinensis HOM05D005579 ORTHO05D006775 5.9e-146 522.7 590 50.5
Sed0022815 Sechium edule HOM05D005579 ORTHO05D006775 1.6e-138 498.0 1085 34.2
Thecc.03G176600 Theobroma cacao HOM05D005579 ORTHO05D006775 2.7e-138 497.3 904 36.1
MBI17_g46332_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 6.5e-137 492.7 843 37.7
Migut.F00340 Erythranthe guttata HOM05D005579 ORTHO05D006775 2.5e-136 490.7 1045 34.2
Thhalv10015364m.g Eutrema salsugineum HOM05D005579 ORTHO05D006775 5.2e-134 483.0 1036 34.1
Lj2g0003134 Lotus japonicus HOM05D005579 ORTHO05D006775 6.8e-134 482.6 858 37.9
SalBow4G1821 Salvia bowleyana HOM05D005579 ORTHO05D006775 1.7e-132 478.0 1071 32.6
SalBow4G2278 Salvia bowleyana HOM05D005579 ORTHO05D006775 3.7e-132 476.9 1075 32.6
Glyma.09G139400 Glycine max HOM05D005579 ORTHO05D006775 4.1e-131 473.4 854 37.7
ClCG09G012930 Citrullus lanatus HOM05D005579 ORTHO05D006775 1.6e-130 471.5 869 37.7
SGA_v2.0_scaffold60G21038 Striga asiatica HOM05D005579 ORTHO05D006775 6.6e-129 466.1 1052 33.8
CsaV3_3G049940 Cucumis sativus L. HOM05D005579 ORTHO05D006775 5.6e-128 463.0 863 37.2
Psat0s2227g0080 Pisum sativum HOM05D005579 ORTHO05D006775 4.7e-127 459.9 909 36.1
Phvul.004G117000 Phaseolus vulgaris HOM05D005579 ORTHO05D006775 1.2e-125 455.3 1056 32.8
VMungo0464G1636 Vigna mungo HOM05D005579 ORTHO05D006775 4.9e-124 449.9 859 35.6
Medtr6g045357 Medicago truncatula HOM05D005579 ORTHO05D006775 8.3e-124 449.1 923 35.2
AL8G26680 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 2.0e-122 444.5 858 36.5
Sp6g14550 Schrenkiella parvula HOM05D005579 ORTHO05D006775 7.8e-122 442.6 923 34.1
THA.LOC104800252 Tarenaya hassleriana HOM05D005579 ORTHO05D006775 1.3e-121 441.8 892 35.0
Sc13g0008650 Simmondsia chinensis HOM05D005579 ORTHO05D006775 2.3e-121 441.0 892 35.5
CARHR265270 Cardamine hirsuta HOM05D005579 ORTHO05D006775 1.5e-120 438.3 1059 32.2
TPR.G10740 Trifolium pratense HOM05D005579 ORTHO05D006775 1.6e-119 434.9 920 34.9
AT5G52290 Arabidopsis thaliana HOM05D005579 ORTHO05D006775 2.8e-119 434.1 910 33.3
AL271U10020 Arabidopsis lyrata HOM05D005579 ORTHO05D006775 8.0e-119 432.6 858 35.5
BcaB01g04199 Brassica carinata HOM05D005579 ORTHO05D006775 2.0e-117 427.9 861 36.4
PGR142G3926 Punica granatum HOM05D005579 ORTHO05D006775 5.4e-115 419.9 939 33.1
Carub.0008s1239 Capsella rubella HOM05D005579 ORTHO05D006775 6.6e-113 412.9 820 35.7
A03p15740 Brassica napus HOM05D005579 ORTHO05D006775 2.5e-112 411.0 853 34.8
C03p18410 Brassica napus HOM05D005579 ORTHO05D006775 5.6e-112 409.8 859 34.8
Haze_13711 Corylus avellana HOM05D005579 ORTHO05D006775 8.9e-110 402.5 614 39.4
Aa31LG3G8710 Aethionema arabicum HOM05D005579 ORTHO05D006775 3.4e-109 400.6 896 32.6
Ah.07g207210 Amaranthus hybridus HOM05D005579 ORTHO05D006775 2.2e-108 397.9 1056 30.9
EL10Ac3g05643 Beta vulgaris HOM05D005579 ORTHO05D006775 2.2e-108 397.9 1152 28.9
BcaC01g06176 Brassica carinata HOM05D005579 ORTHO05D006775 2.9e-108 397.5 860 34.4
BraA03t10864Z Brassica rapa HOM05D005579 ORTHO05D006775 2.7e-106 391.0 917 32.7
BolC3t14238H Brassica oleracea HOM05D005579 ORTHO05D006775 6.0e-106 389.8 930 33.3
DCAR_018198 Daucus carota HOM05D005579 ORTHO05D006775 1.7e-105 388.3 850 34.4
MELO3C003322.2 Cucumis melo HOM05D005579 ORTHO05D006775 3.1e-102 377.5 828 33.1
Rhsim03G0180800 Rhododendron simsii HOM05D005579 ORTHO05D006775 2.7e-82 311.2 1056 28.3
Zm00001eb248620 Zea mays HOM05D005579 ORTHO05D006775 2.5e-80 304.7 891 29.5
Sabra12G0106200 Salix brachista HOM05D005579 ORTHO05D006775 2.9e-76 291.2 1068 26.5
Os02g0642600 Oryza sativa ssp. japonica HOM05D005579 ORTHO05D006775 1.6e-74 285.4 944 27.8
Potri.012G141100 Populus trichocarpa HOM05D005579 ORTHO05D006775 4.3e-72 277.3 1061 26.3
HPP92_008526 Vanilla planifolia HOM05D005579 ORTHO05D006775 2.0e-69 268.5 628 32.3
Manes.06G147100 Manihot esculenta HOM05D005579 ORTHO05D006775 2.9e-68 264.6 1065 26.8
Prupe.2G294300 Prunus persica HOM05D005579 ORTHO05D006775 2.8e-63 248.1 1089 25.4
unitig_37.g12526 Utricularia gibba HOM05D005579 ORTHO05D006775 6.9e-62 243.4 529 33.3
RcHm_v2.0_Chr1g0377251 Rosa chinensis HOM05D005579 ORTHO05D006775 2.0e-61 241.9 1078 26.5
ECA232G1470 Erigeron canadensis HOM05D005579 ORTHO05D006775 1.0e-60 239.6 1043 24.8
Hma1.2p1_0270F.1_g108020 Hydrangea macrophylla HOM05D005579 ORTHO05D006775 3.8e-60 237.7 235 55.3
FvH4_7g29470 Fragaria vesca HOM05D005579 ORTHO05D006775 1.9e-59 235.3 1081 25.6
FAN01G1040 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.2e-59 234.2 1083 25.9
FAN03G0790 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.3e-57 228.4 1085 25.8
FAN10G2011 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.3e-56 224.2 1075 25.4
FAN03G0333 Fragaria x ananassa HOM05D005579 ORTHO05D006775 1.1e-54 219.5 1085 25.2
FAN06G0715 Fragaria x ananassa HOM05D005579 ORTHO05D006775 4.5e-53 214.2 837 26.0
FAN06G0670 Fragaria x ananassa HOM05D005579 ORTHO05D006775 2.2e-52 211.8 837 26.2
MD07G1268700 Malus domestica HOM05D005579 ORTHO05D006775 3.8e-52 211.1 1091 23.6
HanXRQChr15g0495541 Helianthus annuus HOM05D005579 ORTHO05D006775 1.1e-51 209.5 839 26.7
CANSAT21G2370 Cannabis sativa HOM05D005579 ORTHO05D006775 4.7e-50 204.1 869 25.0
Lsat_1_v5_gn_9_55980 Lactuca sativa HOM05D005579 ORTHO05D006775 1.8e-46 192.2 435 33.8
Haze_13712 Corylus avellana HOM05D005579 ORTHO05D006775 1.2e-45 189.5 156 64.1
Lalb_Chr19g0130861 Lupinus albus HOM05D005579 ORTHO05D006775 1.0e-44 186.4 844 25.6
MBI17_g39341_MAGBIO Magnolia biondii HOM05D005579 ORTHO05D006775 2.5e-43 181.8 404 33.2
Atru.chr1.458 Acer truncatum HOM05D005579 ORTHO05D006775 2.3e-41 175.3 202 51.5
AUR62015985 Chenopodium quinoa HOM05D005579 ORTHO05D006775 1.4e-38 166.0 850 24.0
AUR62021193 Chenopodium quinoa HOM05D005579 ORTHO05D006775 3.1e-38 164.9 821 23.3
arahy.Tifrunner.gnm1.ann1.Q0IWYL Arachis hypogaea HOM05D005579 ORTHO05D006775 9.1e-38 163.3 363 31.1
arahy.Tifrunner.gnm1.ann1.TEHT7Q Arachis hypogaea HOM05D005579 ORTHO05D006775 4.5e-37 161.0 363 30.9
Ca_25744_v3 Cicer arietinum L. HOM05D005579 ORTHO05D006775 1.2e-34 152.9 451 27.7
PSO782G1268 Papaver somniferum HOM05D005579 ORTHO05D006775 5.2e-33 147.5 815 21.6
PSO063G6446 Papaver somniferum HOM05D005579 ORTHO05D006775 1.1e-30 139.8 358 28.5
PGSC0003DMG400014341 Solanum tuberosum HOM05D005579 ORTHO05D006775 1.4e-30 139.4 88 78.4
Hund11747 Selenicereus undatus HOM05D005579 ORTHO05D006775 1.2e-29 136.3 217 38.7
SEGI_30883 Sequoiadendron giganteum HOM05D005579 ORTHO05D006775 1.5e-27 129.4 625 23.5
ATR0680G156 Amborella trichopoda HOM05D005579 ORTHO05D006775 4.2e-27 127.9 152 44.7
SHI39775 Sapria himalayana HOM05D005579 ORTHO05D006775 1.2e-26 126.3 116 56.9
CDE08G1090 Ceratophyllum demersum HOM05D005579 ORTHO05D006775 3.4e-24 118.2 102 55.9
MD01G1200800 Malus domestica HOM05D005579 ORTHO05D006775 9.1e-22 110.2 278 31.3
Eucgr.L01677 Eucalyptus grandis HOM05D005579 ORTHO05D006775 5.9e-21 107.5 88 61.4
Mapoly0013s0198 Marchantia polymorpha HOM05D005579 ORTHO05D006775 1.7e-20 105.9 562 24.7
SMO364G0179 Selaginella moellendorffii HOM05D005579 ORTHO05D006775 9.5e-11 73.6 100 43.0
TAR375G0314 Trochodendron aralioides HOM05D005579 ORTHO05D006775 2.8e-10 72.0 125 35.2
FAN10G3029 Fragaria x ananassa HOM05D005579 ORTHO05D006775 6.8e-09 67.4 104 37.5
QL09p014214 Quercus lobata HOM05D005579 ORTHO05D006775 8.9e-09 67.0 92 38.0
FvH4_7g29490 Fragaria vesca HOM05D005579 ORTHO05D006775 5.8e-08 64.3 79 43.0
FAN06G4680 Fragaria x ananassa HOM05D005579 ORTHO05D006775 5.8e-08 64.3 79 43.0
Pp3c21_13440 Physcomitrium patens HOM05D005579 ORTHO05D006775 2.2e-07 62.4 108 31.5
COL.COLO4_31594 Corchorus olitorius HOM05D005579 ORTHO05D006775 5.4e-06 57.8 88 34.1
Haze_13709 Corylus avellana HOM05D005579 ORTHO05D006775 7.0e-06 57.4 86 37.2
MD01G1200900 Malus domestica HOM05D005579 ORTHO05D006775 9.2e-06 57.0 88 37.5


User provided reference genes

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