Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055639.3 Olea europaea HOM05D005339 ORTHO05D006561 3.9e-153 545.0 337 100.0
Dinv41975 Davidia involucrata HOM05D005339 ORTHO05D006561 2.3e-145 519.2 337 95.5
Hma1.2p1_0032F.1_g019680 Hydrangea macrophylla HOM05D005339 ORTHO05D006561 2.3e-145 519.2 337 86.4
Solyc01g111140.3 Solanum lycopersicum HOM05D005339 ORTHO05D006561 8.8e-145 517.3 337 90.2
Sopen01g053200 Solanum pennellii HOM05D005339 ORTHO05D006561 8.8e-145 517.3 337 90.2
PGSC0003DMG400001633 Solanum tuberosum HOM05D005339 ORTHO05D006561 1.5e-144 516.5 337 86.6
vmacro02249 Vaccinium macrocarpon HOM05D005339 ORTHO05D006561 1.5e-144 516.5 337 89.0
Nitab4.5_0000283g0140 Nicotiana tabacum HOM05D005339 ORTHO05D006561 2.0e-144 516.2 337 89.9
Nitab4.5_0000980g0240 Nicotiana tabacum HOM05D005339 ORTHO05D006561 2.0e-144 516.2 337 89.9
CAN.G588.26 Capsicum annuum HOM05D005339 ORTHO05D006561 2.6e-144 515.8 337 88.4
Rhsim11G0187800 Rhododendron simsii HOM05D005339 ORTHO05D006561 2.6e-144 515.8 337 85.8
Actinidia20485 Actinidia chinensis HOM05D005339 ORTHO05D006561 5.7e-144 514.6 337 85.2
Cc11_g02780 Coffea canephora HOM05D005339 ORTHO05D006561 7.4e-144 514.2 338 87.0
Gohir.A03G203200 Gossypium hirsutum HOM05D005339 ORTHO05D006561 9.7e-144 513.8 337 86.4
Gorai.005G252300 Gossypium raimondii HOM05D005339 ORTHO05D006561 9.7e-144 513.8 337 86.4
Gohir.D02G224500 Gossypium hirsutum HOM05D005339 ORTHO05D006561 2.8e-143 512.3 337 86.1
Peaxi162Scf00362g01036 Petunia axillaris HOM05D005339 ORTHO05D006561 4.8e-143 511.5 337 88.1
Thecc.02G066900 Theobroma cacao HOM05D005339 ORTHO05D006561 6.3e-143 511.1 338 86.4
Ciclev10028803m.g Citrus clementina HOM05D005339 ORTHO05D006561 1.4e-142 510.0 337 80.7
CsaV3_2G015710 Cucumis sativus L. HOM05D005339 ORTHO05D006561 1.8e-142 509.6 337 86.1
THA.LOC104807785 Tarenaya hassleriana HOM05D005339 ORTHO05D006561 2.4e-142 509.2 337 85.5
Glyma.05G234700 Glycine max HOM05D005339 ORTHO05D006561 4.1e-142 508.4 337 85.2
PGR142G1539 Punica granatum HOM05D005339 ORTHO05D006561 4.1e-142 508.4 337 84.6
CSS0049457 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 5.3e-142 508.1 338 84.3
Lalb_Chr11g0072011 Lupinus albus HOM05D005339 ORTHO05D006561 5.3e-142 508.1 337 85.2
VMungo0251G0038 Vigna mungo HOM05D005339 ORTHO05D006561 7.0e-142 507.7 340 89.4
GSVIVG01024083001 Vitis vinifera HOM05D005339 ORTHO05D006561 9.1e-142 507.3 337 86.1
arahy.Tifrunner.gnm1.ann1.RMHT0B Arachis hypogaea HOM05D005339 ORTHO05D006561 1.5e-141 506.5 337 86.4
ClCG02G011380 Citrullus lanatus HOM05D005339 ORTHO05D006561 1.5e-141 506.5 337 85.8
Manes.04G078200 Manihot esculenta HOM05D005339 ORTHO05D006561 2.0e-141 506.1 337 85.5
Potri.004G168400 Populus trichocarpa HOM05D005339 ORTHO05D006561 2.6e-141 505.8 337 85.2
ATR0810G182 Amborella trichopoda HOM05D005339 ORTHO05D006561 3.5e-141 505.4 337 85.2
Migut.B00167 Erythranthe guttata HOM05D005339 ORTHO05D006561 3.5e-141 505.4 340 87.6
Glyma.08G042200 Glycine max HOM05D005339 ORTHO05D006561 3.5e-141 505.4 339 84.7
Eucgr.I01375 Eucalyptus grandis HOM05D005339 ORTHO05D006561 5.9e-141 504.6 338 84.3
Phvul.002G320300 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 2.2e-140 502.7 340 86.5
Potri.009G129700 Populus trichocarpa HOM05D005339 ORTHO05D006561 3.8e-140 501.9 337 84.0
Medtr8g105120 Medicago truncatula HOM05D005339 ORTHO05D006561 5.0e-140 501.5 340 85.3
TWI31G0803 Tripterygium wilfordii HOM05D005339 ORTHO05D006561 6.5e-140 501.1 337 84.6
Psat7g008680 Pisum sativum HOM05D005339 ORTHO05D006561 8.5e-140 500.7 341 83.9
RcHm_v2.0_Chr2g0122771 Rosa chinensis HOM05D005339 ORTHO05D006561 1.9e-139 499.6 337 83.7
Sabra04G0112800 Salix brachista HOM05D005339 ORTHO05D006561 1.9e-139 499.6 337 84.0
LjContig00310g0009118 Lotus japonicus HOM05D005339 ORTHO05D006561 2.5e-139 499.2 338 90.5
CDE04G0258 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 3.2e-139 498.8 337 83.4
Prupe.7G010600 Prunus persica HOM05D005339 ORTHO05D006561 3.2e-139 498.8 337 83.4
QL11p047539 Quercus lobata HOM05D005339 ORTHO05D006561 3.2e-139 498.8 336 84.2
QL11p047573 Quercus lobata HOM05D005339 ORTHO05D006561 3.2e-139 498.8 336 84.2
Duzib132G0613 Durio zibethinus HOM05D005339 ORTHO05D006561 4.2e-139 498.4 349 81.4
HanXRQChr15g0478851 Helianthus annuus HOM05D005339 ORTHO05D006561 4.2e-139 498.4 337 86.1
Sed0019675 Sechium edule HOM05D005339 ORTHO05D006561 4.2e-139 498.4 337 83.4
Atru.chr5.3227 Acer truncatum HOM05D005339 ORTHO05D006561 1.6e-138 496.5 337 85.5
Aqoxy5G01796 Aquilegia oxysepala HOM05D005339 ORTHO05D006561 1.6e-138 496.5 337 83.7
arahy.Tifrunner.gnm1.ann1.UV505Z Arachis hypogaea HOM05D005339 ORTHO05D006561 2.1e-138 496.1 353 82.4
SGA_v2.0_scaffold58G20457 Striga asiatica HOM05D005339 ORTHO05D006561 2.1e-138 496.1 360 83.9
CDE02G2588 Ceratophyllum demersum HOM05D005339 ORTHO05D006561 2.7e-138 495.7 337 77.2
Hund06405 Selenicereus undatus HOM05D005339 ORTHO05D006561 2.7e-138 495.7 337 83.1
unitig_744.g24266 Utricularia gibba HOM05D005339 ORTHO05D006561 1.8e-137 493.0 354 83.1
CANSAT25G3263 Cannabis sativa HOM05D005339 ORTHO05D006561 3.0e-137 492.3 337 83.1
SalBow6G1349 Salvia bowleyana HOM05D005339 ORTHO05D006561 4.0e-137 491.9 351 88.3
DCAR_022955 Daucus carota HOM05D005339 ORTHO05D006561 5.2e-137 491.5 355 79.4
DCAR_022956 Daucus carota HOM05D005339 ORTHO05D006561 5.2e-137 491.5 355 79.4
Cfa005184 Carpinus fangiana HOM05D005339 ORTHO05D006561 1.5e-136 490.0 337 81.6
Os09g0535300 Oryza sativa ssp. japonica HOM05D005339 ORTHO05D006561 4.4e-136 488.4 337 83.7
Zm00001eb103630 Zea mays HOM05D005339 ORTHO05D006561 4.4e-136 488.4 337 83.4
FvH4_1g25110 Fragaria vesca HOM05D005339 ORTHO05D006561 5.7e-136 488.0 337 86.9
BcaB08g34965 Brassica carinata HOM05D005339 ORTHO05D006561 7.4e-136 487.6 337 82.2
Carub.0004s0017 Capsella rubella HOM05D005339 ORTHO05D006561 1.7e-135 486.5 339 79.9
Thhalv10000232m.g Eutrema salsugineum HOM05D005339 ORTHO05D006561 1.7e-135 486.5 339 81.7
ECA246G3996 Erigeron canadensis HOM05D005339 ORTHO05D006561 8.2e-135 484.2 330 84.2
CiPaw.05G077200 Carya illinoinensis HOM05D005339 ORTHO05D006561 1.1e-134 483.8 337 81.0
AT2G21150 Arabidopsis thaliana HOM05D005339 ORTHO05D006561 1.4e-134 483.4 338 79.6
CiPaw.06G125300 Carya illinoinensis HOM05D005339 ORTHO05D006561 1.4e-134 483.4 337 81.9
Sp4g00300 Schrenkiella parvula HOM05D005339 ORTHO05D006561 1.4e-134 483.4 338 81.7
AL4G10240 Arabidopsis lyrata HOM05D005339 ORTHO05D006561 1.8e-134 483.0 339 79.4
MBI19_g09243_MAGBIO Magnolia biondii HOM05D005339 ORTHO05D006561 4.1e-134 481.9 365 71.5
MD14G1006100 Malus domestica HOM05D005339 ORTHO05D006561 5.3e-134 481.5 337 80.7
A09p58500 Brassica napus HOM05D005339 ORTHO05D006561 7.0e-134 481.1 344 81.1
Ah.01g009160 Amaranthus hybridus HOM05D005339 ORTHO05D006561 7.7e-133 477.6 337 82.5
C08p41800 Brassica napus HOM05D005339 ORTHO05D006561 2.2e-132 476.1 347 81.3
MD12G1008800 Malus domestica HOM05D005339 ORTHO05D006561 3.8e-132 475.3 337 79.5
PSO700G0269 Papaver somniferum HOM05D005339 ORTHO05D006561 1.1e-131 473.8 339 80.2
BolC8t51743H Brassica oleracea HOM05D005339 ORTHO05D006561 1.5e-131 473.4 347 81.6
Sabra09G0099200 Salix brachista HOM05D005339 ORTHO05D006561 1.9e-131 473.0 372 75.3
AUR62010093 Chenopodium quinoa HOM05D005339 ORTHO05D006561 3.2e-131 472.2 337 79.8
PSO170G1371 Papaver somniferum HOM05D005339 ORTHO05D006561 5.5e-131 471.5 339 79.9
BcaC07g41172 Brassica carinata HOM05D005339 ORTHO05D006561 2.7e-130 469.2 331 83.4
C04p50370 Brassica napus HOM05D005339 ORTHO05D006561 3.6e-130 468.8 338 79.9
BolC4t26635H Brassica oleracea HOM05D005339 ORTHO05D006561 3.6e-130 468.8 338 79.9
Lalb_Chr23g0275171 Lupinus albus HOM05D005339 ORTHO05D006561 8.0e-130 467.6 321 84.1
Lj4g0026543 Lotus japonicus HOM05D005339 ORTHO05D006561 1.4e-129 466.8 321 83.5
Nn7g36850 Nelumbo nucifera HOM05D005339 ORTHO05D006561 1.4e-129 466.8 321 83.2
Pp3c17_13560 Physcomitrium patens HOM05D005339 ORTHO05D006561 2.3e-129 466.1 340 76.8
SMO117G0089 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 3.0e-129 465.7 337 79.2
Lj9C389T6 Lonicera japonica HOM05D005339 ORTHO05D006561 1.5e-128 463.4 377 66.6
Aa31LG7G15530 Aethionema arabicum HOM05D005339 ORTHO05D006561 2.6e-128 462.6 330 81.5
Mapoly0015s0022 Marchantia polymorpha HOM05D005339 ORTHO05D006561 2.6e-128 462.6 338 74.9
AagrBONN_evm.TU.Sc2ySwM_344.4430 Anthoceros agrestis HOM05D005339 ORTHO05D006561 5.7e-128 461.5 337 78.3
BraA09t41237Z Brassica rapa HOM05D005339 ORTHO05D006561 1.3e-127 460.3 366 75.4
Ca_17265_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 1.3e-127 460.3 325 84.0
Ca_17286_v3 Cicer arietinum L. HOM05D005339 ORTHO05D006561 1.3e-127 460.3 325 84.0
FAN23G1071 Fragaria x ananassa HOM05D005339 ORTHO05D006561 4.2e-123 445.3 337 78.3
TAR376G0223 Trochodendron aralioides HOM05D005339 ORTHO05D006561 1.7e-119 433.3 305 83.6
FAN28G0542 Fragaria x ananassa HOM05D005339 ORTHO05D006561 2.2e-119 433.0 366 72.4
FAN28G2786 Fragaria x ananassa HOM05D005339 ORTHO05D006561 2.2e-119 433.0 366 72.4
Haze_02197 Corylus avellana HOM05D005339 ORTHO05D006561 1.1e-118 430.6 337 68.2
AUR62013089 Chenopodium quinoa HOM05D005339 ORTHO05D006561 1.2e-117 427.2 337 75.4
A04p15920 Brassica napus HOM05D005339 ORTHO05D006561 1.3e-116 423.7 337 75.7
Lsat_1_v5_gn_3_45301 Lactuca sativa HOM05D005339 ORTHO05D006561 3.7e-111 405.6 334 75.4
EL10Ac9g21438 Beta vulgaris HOM05D005339 ORTHO05D006561 1.8e-110 403.3 352 70.5
TPR.G17076 Trifolium pratense HOM05D005339 ORTHO05D006561 4.1e-110 402.1 284 81.3
BraA04t17225Z Brassica rapa HOM05D005339 ORTHO05D006561 1.6e-106 390.2 516 51.9
FAN19G3054 Fragaria x ananassa HOM05D005339 ORTHO05D006561 2.4e-102 376.3 339 75.8
Manes.11G090000 Manihot esculenta HOM05D005339 ORTHO05D006561 2.4e-102 376.3 274 82.5
Sc08g0003210 Simmondsia chinensis HOM05D005339 ORTHO05D006561 2.4e-102 376.3 196 92.9
FAN26G3137 Fragaria x ananassa HOM05D005339 ORTHO05D006561 5.8e-96 355.1 337 74.2
Cpa.g.sc37.191 Carica papaya HOM05D005339 ORTHO05D006561 6.0e-93 345.1 321 62.0
COL.COLO4_17257 Corchorus olitorius HOM05D005339 ORTHO05D003646 2.5e-91 339.7 320 70.3
MELO3C020783.2 Cucumis melo HOM05D005339 ORTHO05D006561 2.8e-90 336.3 255 82.4
Pp3c2_11550 Physcomitrium patens HOM05D005339 ORTHO05D006561 1.6e-85 320.5 277 70.0
HPP92_028582 Vanilla planifolia HOM05D005339 ORTHO05D006561 6.2e-82 308.5 337 60.8
VMungo0251G1189 Vigna mungo HOM05D005339 ORTHO05D006561 2.4e-81 306.6 147 96.6
Cre07.g341300 Chlamydomonas reinhardtii HOM05D005339 ORTHO05D006561 4.0e-81 305.8 381 46.7
MCO15G465 Micromonas commoda HOM05D005339 ORTHO05D006561 2.1e-74 283.5 330 50.6
QL11p047601 Quercus lobata HOM05D005339 ORTHO05D006561 3.1e-65 253.1 171 73.7
PRCOL_00006995 Prasinoderma coloniale HOM05D005339 ORTHO05D006561 2.1e-58 230.3 326 45.7
SEGI_00782 Sequoiadendron giganteum HOM05D005339 ORTHO05D006561 1.4e-57 227.6 211 73.5
CBR_g47091 Chara braunii HOM05D005339 ORTHO05D006561 1.3e-52 211.1 116 85.3
CSS0019608 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.3e-42 177.9 82 97.6
CSS0027179 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 1.5e-40 171.0 91 92.3
Actinidia00595 Actinidia chinensis HOM05D005339 ORTHO05D006561 7.9e-37 158.7 89 93.3
VMungo0251G1261 Vigna mungo HOM05D005339 ORTHO05D006561 5.1e-36 156.0 89 92.1
CARHR112000 Cardamine hirsuta HOM05D005339 ORTHO05D006561 1.1e-33 148.3 166 59.0
Phvul.002G320400 Phaseolus vulgaris HOM05D005339 ORTHO05D006561 1.6e-24 117.9 320 31.9
TPR.G35331 Trifolium pratense HOM05D005339 ORTHO05D006561 7.2e-22 109.0 55 90.9
Cfa025584 Carpinus fangiana HOM05D005339 ORTHO05D006561 7.0e-17 92.4 200 32.0
MCO03G074 Micromonas commoda HOM05D005339 ORTHO05D006561 5.9e-16 89.4 200 28.0
SMO274G0062 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 1.1e-14 85.1 64 65.6
RcHm_v2.0_Chr5g0045021 Rosa chinensis HOM05D005339 ORTHO05D006561 3.0e-12 77.0 39 87.2
SMO301G0014 Selaginella moellendorffii HOM05D005339 ORTHO05D006561 8.8e-12 75.5 54 68.5
TPR.G17724 Trifolium pratense HOM05D005339 ORTHO05D006561 8.8e-12 75.5 41 90.2
Migut.O00339 Erythranthe guttata HOM05D005339 ORTHO05D006561 3.7e-10 70.1 30 96.7
Actinidia00596 Actinidia chinensis HOM05D003396 ORTHO05D003646 1.1e-09 68.6 45 73.3
CSS0035622 Camellia sinensis var. sinensis HOM05D005339 ORTHO05D006561 7.7e-08 62.4 33 93.9


User provided reference genes

Program Settings