Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu055283.1 Olea europaea HOM05D002650 ORTHO05D292627 1.3e-45 186.0 91 100.0
Oeu005234.1 Olea europaea HOM05D002650 ORTHO05D002924 7.9e-32 140.2 87 83.9
Actinidia06482 Actinidia chinensis HOM05D002650 ORTHO05D002924 4.2e-25 117.9 87 67.8
CSS0028760 Camellia sinensis var. sinensis HOM05D002650 ORTHO05D002924 4.2e-25 117.9 86 68.6
Nitab4.5_0006562g0040 Nicotiana tabacum HOM05D002650 ORTHO05D002924 9.3e-25 116.7 87 67.8
Nitab4.5_0011135g0030 Nicotiana tabacum HOM05D002650 ORTHO05D002924 6.0e-24 114.0 87 65.5
Peaxi162Scf00464g00317 Petunia axillaris HOM05D002650 ORTHO05D002924 6.0e-24 114.0 87 65.5
Sopen11g006250 Solanum pennellii HOM05D002650 ORTHO05D002924 1.8e-23 112.5 87 65.5
Dinv19048 Davidia involucrata HOM05D002650 ORTHO05D002924 3.9e-23 111.3 87 66.7
Solyc11g011460.2 Solanum lycopersicum HOM05D002650 ORTHO05D002924 8.7e-23 110.2 87 64.4
PGSC0003DMG400013241 Solanum tuberosum HOM05D002650 ORTHO05D002924 1.1e-22 109.8 87 64.4
CAN.G222.61 Capsicum annuum HOM05D002650 ORTHO05D002924 2.5e-22 108.6 87 62.1
Rhsim10G0180200 Rhododendron simsii HOM05D002650 ORTHO05D002924 2.5e-22 108.6 87 59.8
vmacro20586 Vaccinium macrocarpon HOM05D002650 ORTHO05D002924 2.5e-22 108.6 87 62.1
DCAR_001980 Daucus carota HOM05D002650 ORTHO05D002924 2.2e-21 105.5 87 58.6
Cfa007541 Carpinus fangiana HOM05D002650 ORTHO05D002924 2.4e-20 102.1 87 56.3
Haze_14545 Corylus avellana HOM05D002650 ORTHO05D002924 3.1e-20 101.7 87 57.5
Nn4g23144 Nelumbo nucifera HOM05D002650 ORTHO05D002924 5.3e-20 100.9 87 55.2
TAR629G2089 Trochodendron aralioides HOM05D002650 ORTHO05D002924 5.9e-19 97.4 87 54.0
TAR629G3266 Trochodendron aralioides HOM05D002650 ORTHO05D002924 5.9e-19 97.4 87 54.0
Atru.chr8.143 Acer truncatum HOM05D002650 ORTHO05D002924 7.6e-19 97.1 87 54.0
HanXRQChr16g0529961 Helianthus annuus HOM05D002650 ORTHO05D002924 7.6e-19 97.1 87 52.9
MD17G1050500 Malus domestica HOM05D002650 ORTHO05D002924 1.3e-18 96.3 87 54.0
Prupe.3G268500 Prunus persica HOM05D002650 ORTHO05D002924 1.3e-18 96.3 86 54.7
ECA238G2441 Erigeron canadensis HOM05D002650 ORTHO05D002924 1.7e-18 95.9 87 55.2
Lsat_1_v5_gn_2_68300 Lactuca sativa HOM05D002650 ORTHO05D002924 2.9e-18 95.1 86 57.0
QL01p016137 Quercus lobata HOM05D002650 ORTHO05D002924 2.9e-18 95.1 87 51.7
HanXRQChr07g0191751 Helianthus annuus HOM05D002650 ORTHO05D002924 5.0e-18 94.4 87 52.9
CANSAT64G1048 Cannabis sativa HOM05D002650 ORTHO05D002924 6.5e-18 94.0 87 54.0
Migut.D02508 Erythranthe guttata HOM05D002650 ORTHO05D002924 1.1e-17 93.2 87 56.3
QL11p025200 Quercus lobata HOM05D002650 ORTHO05D002924 1.1e-17 93.2 87 50.6
Migut.D02453 Erythranthe guttata HOM05D002650 ORTHO05D002924 2.5e-17 92.0 87 55.2
RcHm_v2.0_Chr2g0168661 Rosa chinensis HOM05D002650 ORTHO05D002924 4.2e-17 91.3 87 51.7
Sc07g0004540 Simmondsia chinensis HOM05D002650 ORTHO05D002924 4.2e-17 91.3 87 54.0
Sc07g0004550 Simmondsia chinensis HOM05D002650 ORTHO05D002924 4.2e-17 91.3 87 54.0
MBI05_g08280_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 9.3e-17 90.1 88 48.9
Hund15391 Selenicereus undatus HOM05D002650 ORTHO05D002924 1.2e-16 89.7 87 54.0
Aqoxy3G03365 Aquilegia oxysepala HOM05D002650 ORTHO05D002924 2.1e-16 89.0 87 46.0
Oeu064759.1 Olea europaea HOM05D002650 ORTHO05D002924 2.7e-16 88.6 54 83.3
EL10Ac6g14001 Beta vulgaris HOM05D002650 ORTHO05D002924 3.6e-16 88.2 87 51.7
Duzib147G0083 Durio zibethinus HOM05D002650 ORTHO05D002924 3.6e-16 88.2 87 49.4
MBI06_g06491_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 3.6e-16 88.2 88 47.7
Manes.01G090100 Manihot esculenta HOM05D002650 ORTHO05D002924 4.6e-16 87.8 87 51.7
Aqoxy3G00648 Aquilegia oxysepala HOM05D002650 ORTHO05D002924 1.0e-15 86.7 87 47.1
CiPaw.04G017900 Carya illinoinensis HOM05D002650 ORTHO05D002924 1.0e-15 86.7 87 49.4
FvH4_6g26790 Fragaria vesca HOM05D002650 ORTHO05D002924 1.0e-15 86.7 85 50.6
FAN14G0746 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.0e-15 86.7 85 50.6
Gohir.D09G015700 Gossypium hirsutum HOM05D002650 ORTHO05D002924 1.4e-15 86.3 87 48.3
Gorai.006G017900 Gossypium raimondii HOM05D002650 ORTHO05D002924 1.4e-15 86.3 87 48.3
Sabra17G0072900 Salix brachista HOM05D002650 ORTHO05D002924 1.4e-15 86.3 87 50.6
COL.COLO4_33292 Corchorus olitorius HOM05D002650 ORTHO05D002924 1.8e-15 85.9 87 47.1
FAN02G3124 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.8e-15 85.9 87 49.4
FAN05G0367 Fragaria x ananassa HOM05D002650 ORTHO05D002924 1.8e-15 85.9 87 49.4
SGA_v2.0_scaffold21G09475 Striga asiatica HOM05D002650 ORTHO05D002924 1.8e-15 85.9 88 48.9
Psat1g074520 Pisum sativum HOM05D002650 ORTHO05D002924 3.0e-15 85.1 87 49.4
Ca_04278_v3 Cicer arietinum L. HOM05D002650 ORTHO05D002924 5.1e-15 84.3 87 50.6
Potri.017G081900 Populus trichocarpa HOM05D002650 ORTHO05D002924 5.1e-15 84.3 87 48.3
Thecc.04G080400 Theobroma cacao HOM05D002650 ORTHO05D002924 6.7e-15 84.0 87 46.0
AUR62032466 Chenopodium quinoa HOM05D002650 ORTHO05D002924 8.8e-15 83.6 87 47.1
Eucgr.E04299 Eucalyptus grandis HOM05D002650 ORTHO05D002924 8.8e-15 83.6 87 50.6
Lj2g0025076 Lotus japonicus HOM05D002650 ORTHO05D002924 8.8e-15 83.6 87 48.3
arahy.Tifrunner.gnm1.ann1.J8Q99B Arachis hypogaea HOM05D002650 ORTHO05D002924 1.1e-14 83.2 87 51.7
arahy.Tifrunner.gnm1.ann1.KZ49VN Arachis hypogaea HOM05D002650 ORTHO05D002924 1.1e-14 83.2 87 51.7
AUR62044728 Chenopodium quinoa HOM05D002650 ORTHO05D002924 1.5e-14 82.8 87 46.0
Sp7g02220 Schrenkiella parvula HOM05D002650 ORTHO05D002924 1.5e-14 82.8 87 49.4
FvH4_7g07700 Fragaria vesca HOM05D002650 ORTHO05D002924 1.9e-14 82.4 87 46.0
Aa31LG9G16330 Aethionema arabicum HOM05D002650 ORTHO05D002924 2.5e-14 82.0 87 48.3
ATR0564G515 Amborella trichopoda HOM05D002650 ORTHO05D002924 3.3e-14 81.6 85 43.5
Ciclev10011090m.g Citrus clementina HOM05D002650 ORTHO05D002924 3.3e-14 81.6 87 48.3
Gohir.A09G017050 Gossypium hirsutum HOM05D002650 ORTHO05D002924 4.3e-14 81.3 87 46.0
Lalb_Chr02g0159671 Lupinus albus HOM05D002650 ORTHO05D002924 4.3e-14 81.3 87 49.4
Dinv28179 Davidia involucrata HOM05D002650 ORTHO05D002924 5.7e-14 80.9 66 63.6
PSO675G8623 Papaver somniferum HOM05D002650 ORTHO05D002924 5.7e-14 80.9 88 46.6
unitig_736.g22345 Utricularia gibba HOM05D002650 ORTHO05D002924 5.7e-14 80.9 87 47.1
PGR142G0615 Punica granatum HOM05D002650 ORTHO05D002924 7.4e-14 80.5 87 48.3
Cc07_g13230 Coffea canephora HOM05D002650 ORTHO05D002924 9.7e-14 80.1 87 49.4
CsaV3_6G000630 Cucumis sativus L. HOM05D002650 ORTHO05D002924 9.7e-14 80.1 88 50.0
FAN06G5007 Fragaria x ananassa HOM05D002650 ORTHO05D002924 9.7e-14 80.1 87 44.8
Medtr6g011800 Medicago truncatula HOM05D002650 ORTHO05D002924 9.7e-14 80.1 87 46.0
TPR.G21390 Trifolium pratense HOM05D002650 ORTHO05D002924 1.3e-13 79.7 87 47.1
SHI06833 Sapria himalayana HOM05D002650 ORTHO05D002924 2.8e-13 78.6 87 48.3
TWI60G0183 Tripterygium wilfordii HOM05D002650 ORTHO05D002924 3.7e-13 78.2 87 47.1
AL7G50400 Arabidopsis lyrata HOM05D002650 ORTHO05D002924 4.8e-13 77.8 87 44.8
MELO3C021203.2 Cucumis melo HOM05D002650 ORTHO05D002924 6.3e-13 77.4 88 50.0
PSO063G6920 Papaver somniferum HOM05D002650 ORTHO05D002924 6.3e-13 77.4 88 44.3
PSO832G1866 Papaver somniferum HOM05D002650 ORTHO05D002924 6.3e-13 77.4 88 44.3
Sed0002537 Sechium edule HOM05D002650 ORTHO05D002924 6.3e-13 77.4 73 54.8
TPR.G3004 Trifolium pratense HOM05D002650 ORTHO05D002924 8.2e-13 77.0 87 43.7
Glyma.19G021800 Glycine max HOM05D002650 ORTHO05D002924 2.4e-12 75.5 87 47.1
AT5G39840 Arabidopsis thaliana HOM05D002650 ORTHO05D002924 5.3e-12 74.3 87 44.8
CARHR262390 Cardamine hirsuta HOM05D002650 ORTHO05D002924 1.2e-11 73.2 88 45.5
CDE04G1324 Ceratophyllum demersum HOM05D002650 ORTHO05D002924 1.5e-11 72.8 87 41.4
Thhalv10027648m.g Eutrema salsugineum HOM05D002650 ORTHO05D002924 2.0e-11 72.4 87 42.5
BcaB06g27380 Brassica carinata HOM05D002650 ORTHO05D002924 2.6e-11 72.0 85 44.7
Glyma.13G063500 Glycine max HOM05D002650 ORTHO05D002924 3.4e-11 71.6 87 44.8
CDE07G1280 Ceratophyllum demersum HOM05D002650 ORTHO05D002924 4.5e-11 71.2 87 40.2
Carub.0007s3589 Capsella rubella HOM05D002650 ORTHO05D002924 5.9e-11 70.9 85 44.7
Phvul.004G028100 Phaseolus vulgaris HOM05D002650 ORTHO05D002924 5.9e-11 70.9 87 44.8
VMungo0464G0369 Vigna mungo HOM05D002650 ORTHO05D002924 6.5e-10 67.4 87 42.5
HPP92_004328 Vanilla planifolia HOM05D002650 ORTHO05D002924 1.1e-09 66.6 86 44.2
AagrBONN_evm.TU.Sc2ySwM_117.4074 Anthoceros agrestis HOM05D002650 ORTHO05D002924 4.4e-06 54.7 86 36.0


User provided reference genes

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