Gene: Sopen11g006250
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g006250
- Transcript Identifier Sopen11g006250.1
- Gene Type Coding gene
- Location Spenn-ch11 : 4596572-4600376 : positive
Gene Family Information
- ID HOM05D002650
- #Genes/#Species 259/98
- Phylogenetic origin
- ID ORTHO05D002924
- #Genes/#Species 254/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g006250.1
Descriptions
- Description ATP-dependent RNA helicase, mitochondrial, putative | FUNCTIONS IN: helicase activity, ATP-dependent RNA helicase activity, nucleic acid binding, ATP binding | INVOLVED IN: biological_process unknown | LOCATED IN: mitochondrion | EXPRESSED IN: 14 plant structures | EXPRESSED DURING: 7 growth stages | CONTAINS InterPro DOMAIN/s: Mitochondrial degradasome RNA helicase subunit C-terminal , DEAD-like helicase, N-terminal , DNA/RNA helicase, C-terminal , Helicase, superfamily 1/2, ATP-binding domain | BEST Arabidopsis thaliana protein match is: ATP-dependent RNA helicase, mitochondrial (SUV3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003724 | IEA | InterPro | RNA helicase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016817 | IEA | InterPro | hydrolase activity, acting on acid anhydrides |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041082 | Suv3, C-terminal domain 1 |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR001650 | Helicase, C-terminal |
| IPR044774 | Suv3, DEXQ-box helicase domain |
| IPR022192 | Mitochondrial degradasome RNA helicase subunit, C-terminal domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |