Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu052004.1 Olea europaea HOM05D004008 ORTHO05D005383 1.8e-207 725.7 373 100.0
MSTRG.13067 Avicennia marina HOM05D004008 ORTHO05D005383 2.1e-168 595.9 374 83.2
unitig_21.g20251 Utricularia gibba HOM05D004008 ORTHO05D005383 3.4e-166 588.6 356 84.3
Dinv42507 Davidia involucrata HOM05D004008 ORTHO05D005383 2.2e-165 585.9 381 79.8
Migut.M01552 Erythranthe guttata HOM05D004008 ORTHO05D005383 3.8e-165 585.1 370 82.2
SalBow8G2118 Salvia bowleyana HOM05D004008 ORTHO05D005383 3.8e-165 585.1 377 80.9
MSTRG.14544 Avicennia marina HOM05D004008 ORTHO05D005383 5.0e-165 584.7 374 81.3
CSS0024885 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 5.0e-165 584.7 367 82.6
Lsat_1_v5_gn_7_112100 Lactuca sativa HOM05D004008 ORTHO05D005383 5.0e-165 584.7 373 80.2
Dinv19616 Davidia involucrata HOM05D004008 ORTHO05D005383 6.5e-165 584.3 377 80.1
Cfa008746 Carpinus fangiana HOM05D004008 ORTHO05D005383 7.2e-164 580.9 357 84.3
Haze_11762 Corylus avellana HOM05D004008 ORTHO05D005383 2.1e-163 579.3 357 84.0
Peaxi162Scf00452g00831 Petunia axillaris HOM05D004008 ORTHO05D005383 3.6e-163 578.6 360 81.4
Actinidia12791 Actinidia chinensis HOM05D004008 ORTHO05D005383 4.6e-163 578.2 375 79.7
Cc05_g16090 Coffea canephora HOM05D004008 ORTHO05D005383 1.8e-162 576.2 377 80.1
Migut.H01689 Erythranthe guttata HOM05D004008 ORTHO05D005383 3.0e-162 575.5 377 80.6
Nitab4.5_0001791g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 8.7e-162 573.9 363 82.1
Sopen07g034650 Solanum pennellii HOM05D004008 ORTHO05D005383 8.7e-162 573.9 360 81.4
Solyc07g066470.3 Solanum lycopersicum HOM05D004008 ORTHO05D005383 1.9e-161 572.8 360 81.1
Lj1A905T43 Lonicera japonica HOM05D004008 ORTHO05D005383 4.3e-161 571.6 377 79.0
CAN.G943.40 Capsicum annuum HOM05D004008 ORTHO05D005383 9.7e-161 570.5 348 83.0
TAR626G0539 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.6e-160 569.7 361 79.5
TAR626G1776 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.6e-160 569.7 361 79.5
Nitab4.5_0000134g0020 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.2e-160 569.3 357 81.8
PGSC0003DMG400022126 Solanum tuberosum HOM05D004008 ORTHO05D005383 3.7e-160 568.5 360 80.6
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 4.8e-160 568.2 365 80.3
CiPaw.01G129500 Carya illinoinensis HOM05D004008 ORTHO05D005383 1.4e-159 566.6 349 83.7
Hma1.2p1_0637F.1_g193530 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 2.4e-159 565.8 376 77.4
Hma1.2p1_0334F.1_g128730 Hydrangea macrophylla HOM05D004008 ORTHO05D005383 2.6e-158 562.4 354 82.5
Prupe.1G348400 Prunus persica HOM05D004008 ORTHO05D005383 3.4e-158 562.0 361 82.3
Glyma.11G094700 Glycine max HOM05D004008 ORTHO05D005383 1.3e-157 560.1 327 87.2
Glyma.12G021100 Glycine max HOM05D004008 ORTHO05D005383 1.3e-157 560.1 327 87.5
SGA_v2.0_scaffold186G40215 Striga asiatica HOM05D004008 ORTHO05D005383 3.8e-157 558.5 392 77.0
GSVIVG01002505001 Vitis vinifera HOM05D004008 ORTHO05D005383 5.0e-157 558.1 327 86.5
Peaxi162Scf00006g00139 Petunia axillaris HOM05D004008 ORTHO05D005383 1.1e-156 557.0 396 75.5
TWI75G1091 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.4e-156 556.6 351 81.8
Manes.11G103000 Manihot esculenta HOM05D004008 ORTHO05D005383 3.2e-156 555.4 357 80.4
CsaV3_3G031800 Cucumis sativus L. HOM05D004008 ORTHO05D005383 4.2e-156 555.1 355 79.7
MD13G1004100 Malus domestica HOM05D004008 ORTHO05D005383 5.5e-156 554.7 354 81.1
QL12p007515 Quercus lobata HOM05D004008 ORTHO05D005383 5.5e-156 554.7 340 83.5
arahy.Tifrunner.gnm1.ann1.416KLQ Arachis hypogaea HOM05D004008 ORTHO05D005383 9.4e-156 553.9 357 81.2
Potri.007G072500 Populus trichocarpa HOM05D004008 ORTHO05D005383 1.2e-155 553.5 353 81.3
Sed0006741 Sechium edule HOM05D004008 ORTHO05D005383 1.6e-155 553.1 356 80.1
CANSAT78G1304 Cannabis sativa HOM05D004008 ORTHO05D005383 2.1e-155 552.7 354 82.2
CSS0025050 Camellia sinensis var. sinensis HOM05D004008 ORTHO05D005383 2.7e-155 552.4 369 78.6
arahy.Tifrunner.gnm1.ann1.6Z73IP Arachis hypogaea HOM05D004008 ORTHO05D005383 4.6e-155 551.6 353 80.5
Ciclev10031858m.g Citrus clementina HOM05D004008 ORTHO05D005383 4.6e-155 551.6 354 81.4
arahy.Tifrunner.gnm1.ann1.KXDS8S Arachis hypogaea HOM05D004008 ORTHO05D005383 6.1e-155 551.2 357 81.2
THA.LOC104800860 Tarenaya hassleriana HOM05D004008 ORTHO05D005383 7.9e-155 550.8 351 82.1
Medtr4g076600 Medicago truncatula HOM05D004008 ORTHO05D005383 1.0e-154 550.4 327 85.6
Ca_26057_v3 Cicer arietinum L. HOM05D004008 ORTHO05D005383 1.4e-154 550.1 327 85.9
Eucgr.C00142 Eucalyptus grandis HOM05D004008 ORTHO05D005383 1.8e-154 549.7 356 80.6
ClCG10G012060 Citrullus lanatus HOM05D004008 ORTHO05D005383 2.3e-154 549.3 370 77.8
Gohir.A03G165100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.3e-154 549.3 354 80.8
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 2.3e-154 549.3 387 73.9
Potri.005G091600 Populus trichocarpa HOM05D004008 ORTHO05D005383 6.7e-154 547.7 353 80.7
MD16G1003400 Malus domestica HOM05D004008 ORTHO05D005383 1.5e-153 546.6 363 78.8
Gohir.D02G188300 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.0e-153 546.2 354 80.2
Phvul.011G177100 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.0e-153 546.2 328 85.4
Gorai.005G211000 Gossypium raimondii HOM05D004008 ORTHO05D005383 2.6e-153 545.8 354 80.2
Cpa.g.sc43.43 Carica papaya HOM05D004008 ORTHO05D005383 3.3e-153 545.4 352 80.7
Rhsim06G0054400 Rhododendron simsii HOM05D004008 ORTHO05D005383 4.4e-153 545.0 368 78.3
Duzib132G0865 Durio zibethinus HOM05D004008 ORTHO05D005383 5.7e-153 544.7 356 79.8
RcHm_v2.0_Chr4g0446801 Rosa chinensis HOM05D004008 ORTHO05D005383 5.7e-153 544.7 351 80.1
AT5G08280 Arabidopsis thaliana HOM05D004008 ORTHO05D005383 7.4e-153 544.3 374 75.1
Glyma.01G227400 Glycine max HOM05D004008 ORTHO05D005383 1.3e-152 543.5 339 82.6
TWI12G0055 Tripterygium wilfordii HOM05D004008 ORTHO05D005383 1.3e-152 543.5 343 82.2
vmacro11667 Vaccinium macrocarpon HOM05D004008 ORTHO05D005383 1.3e-152 543.5 466 65.0
ATR0763G059 Amborella trichopoda HOM05D004008 ORTHO05D005383 1.7e-152 543.1 352 78.4
HanXRQChr05g0153591 Helianthus annuus HOM05D004008 ORTHO05D005383 1.7e-152 543.1 355 79.7
AL6G18680 Arabidopsis lyrata HOM05D004008 ORTHO05D005383 2.8e-152 542.3 355 78.6
VMungo1215G1012 Vigna mungo HOM05D004008 ORTHO05D005383 3.7e-152 542.0 326 84.4
Thhalv10013814m.g Eutrema salsugineum HOM05D004008 ORTHO05D005383 4.8e-152 541.6 374 76.5
Sp6g34680 Schrenkiella parvula HOM05D004008 ORTHO05D005383 4.8e-152 541.6 374 75.4
CARHR204850 Cardamine hirsuta HOM05D004008 ORTHO05D005383 6.3e-152 541.2 376 75.3
SGA_v2.0_scaffold7G03592 Striga asiatica HOM05D004008 ORTHO05D005383 6.3e-152 541.2 378 77.2
Carub.0006s0716 Capsella rubella HOM05D004008 ORTHO05D005383 1.1e-151 540.4 355 78.0
Lalb_Chr09g0320431 Lupinus albus HOM05D004008 ORTHO05D005383 1.4e-151 540.0 360 79.4
Thecc.02G158900 Theobroma cacao HOM05D004008 ORTHO05D005383 1.4e-151 540.0 354 79.7
Aa31LG3G18290 Aethionema arabicum HOM05D004008 ORTHO05D005383 2.4e-151 539.3 354 78.5
HanXRQChr01g0007731 Helianthus annuus HOM05D004008 ORTHO05D005383 4.1e-151 538.5 343 79.6
Psat7g172760 Pisum sativum HOM05D004008 ORTHO05D005383 4.1e-151 538.5 327 83.8
Sc10g0004580 Simmondsia chinensis HOM05D004008 ORTHO05D005383 4.1e-151 538.5 352 77.6
Aqoxy6G00207 Aquilegia oxysepala HOM05D004008 ORTHO05D005383 5.3e-151 538.1 350 78.0
COL.COLO4_33043 Corchorus olitorius HOM05D004008 ORTHO05D005383 5.3e-151 538.1 369 77.8
LjContig00222g0009052 Lotus japonicus HOM05D004008 ORTHO05D005383 5.3e-151 538.1 335 82.1
TPR.G11683 Trifolium pratense HOM05D004008 ORTHO05D005383 6.9e-151 537.7 354 79.1
Ah.10g029970 Amaranthus hybridus HOM05D004008 ORTHO05D005383 2.0e-150 536.2 369 75.1
C09p68660 Brassica napus HOM05D004008 ORTHO05D005383 2.0e-150 536.2 355 78.0
Gorai.012G134300 Gossypium raimondii HOM05D004008 ORTHO05D005383 2.0e-150 536.2 356 78.9
BcaB01g05618 Brassica carinata HOM05D004008 ORTHO05D005383 4.5e-150 535.0 355 78.3
BolC3t12952H Brassica oleracea HOM05D004008 ORTHO05D005383 4.5e-150 535.0 355 78.3
VMungo1127G2017 Vigna mungo HOM05D004008 ORTHO05D005383 4.5e-150 535.0 323 84.8
A10p28400 Brassica napus HOM05D004008 ORTHO05D005383 5.9e-150 534.6 355 77.5
BraA10t44887Z Brassica rapa HOM05D004008 ORTHO05D005383 5.9e-150 534.6 355 77.5
PGR142G0362 Punica granatum HOM05D004008 ORTHO05D005383 7.7e-150 534.3 355 77.7
BcaNung05097 Brassica carinata HOM05D004008 ORTHO05D005383 1.0e-149 533.9 355 78.6
C03p04200 Brassica napus HOM05D004008 ORTHO05D005383 1.0e-149 533.9 355 78.9
BolC9t59612H Brassica oleracea HOM05D004008 ORTHO05D005383 1.3e-149 533.5 355 77.7
C02p03470 Brassica napus HOM05D004008 ORTHO05D005383 1.7e-149 533.1 355 77.5
Phvul.002G034500 Phaseolus vulgaris HOM05D004008 ORTHO05D005383 2.9e-149 532.3 342 79.5
RcHm_v2.0_Chr1g0330101 Rosa chinensis HOM05D004008 ORTHO05D005383 2.9e-149 532.3 330 81.5
BraA02t04947Z Brassica rapa HOM05D004008 ORTHO05D005383 3.8e-149 531.9 355 77.2
Hund13394 Selenicereus undatus HOM05D004008 ORTHO05D005383 5.0e-149 531.6 350 76.9
A03p03710 Brassica napus HOM05D004008 ORTHO05D005383 1.1e-148 530.4 355 77.7
BraA03t09719Z Brassica rapa HOM05D004008 ORTHO05D005383 1.1e-148 530.4 355 77.7
CDE05G3126 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 4.2e-148 528.5 349 76.8
EL10Ac2g02758 Beta vulgaris HOM05D004008 ORTHO05D005383 7.2e-148 527.7 352 76.1
FvH4_7g04700 Fragaria vesca HOM05D004008 ORTHO05D005383 7.2e-148 527.7 330 81.5
FAN10G2193 Fragaria x ananassa HOM05D004008 ORTHO05D005383 7.2e-148 527.7 330 81.5
BolC2t06308H Brassica oleracea HOM05D004008 ORTHO05D005383 9.4e-148 527.3 355 76.6
Duzib248G1235 Durio zibethinus HOM05D004008 ORTHO05D005383 9.4e-148 527.3 354 77.7
FAN07G1552 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.6e-147 526.6 348 77.6
CDE11G0020 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 4.7e-147 525.0 349 76.2
MBI18_g03839_MAGBIO Magnolia biondii HOM05D004008 ORTHO05D005383 1.0e-146 523.9 356 76.4
FAN12G0417 Fragaria x ananassa HOM05D004008 ORTHO05D005383 1.8e-146 523.1 349 77.7
FAN03G0704 Fragaria x ananassa HOM05D004008 ORTHO05D005383 3.0e-146 522.3 327 81.3
AUR62031735 Chenopodium quinoa HOM05D004008 ORTHO05D005383 5.2e-146 521.5 365 73.2
ECA248G2166 Erigeron canadensis HOM05D004008 ORTHO05D005383 2.0e-145 519.6 319 82.8
Sabra07G0061100 Salix brachista HOM05D004008 ORTHO05D005383 2.6e-145 519.2 431 66.8
HPP92_002271 Vanilla planifolia HOM05D004008 ORTHO05D005383 3.3e-145 518.8 342 76.3
Gohir.A04G108500 Gossypium hirsutum HOM05D004008 ORTHO05D005383 4.4e-145 518.5 360 76.4
AUR62032620 Chenopodium quinoa HOM05D004008 ORTHO05D005383 5.7e-145 518.1 370 72.2
PSO541G2232 Papaver somniferum HOM05D004008 ORTHO05D005383 3.7e-144 515.4 360 72.5
PSO675G0755 Papaver somniferum HOM05D004008 ORTHO05D005383 1.8e-143 513.1 360 72.2
CDE02G2123 Ceratophyllum demersum HOM05D004008 ORTHO05D005383 3.1e-143 512.3 326 79.8
FAN06G1123 Fragaria x ananassa HOM05D004008 ORTHO05D005383 7.0e-143 511.1 329 79.3
FAN06G2867 Fragaria x ananassa HOM05D004008 ORTHO05D005383 7.0e-143 511.1 329 79.3
Sabra05G0076100 Salix brachista HOM05D004008 ORTHO05D005383 1.2e-142 510.4 417 67.4
Lj4g0025599 Lotus japonicus HOM05D004008 ORTHO05D005383 2.6e-142 509.2 359 74.9
FAN17G0554 Fragaria x ananassa HOM05D004008 ORTHO05D005383 5.9e-142 508.1 300 83.7
MELO3C024010.2 Cucumis melo HOM05D004008 ORTHO05D005383 1.5e-140 503.4 285 87.4
BcaB08g37268 Brassica carinata HOM05D004008 ORTHO05D005383 1.5e-137 493.4 355 73.5
Gohir.D04G148100 Gossypium hirsutum HOM05D004008 ORTHO05D005383 2.6e-137 492.7 285 87.0
DCAR_013737 Daucus carota HOM05D004008 ORTHO05D005383 1.3e-136 490.3 347 73.8
Os02g0168800 Oryza sativa ssp. japonica HOM05D004008 ORTHO05D005383 4.8e-136 488.4 347 72.6
Zm00001eb207370 Zea mays HOM05D004008 ORTHO05D005383 4.8e-136 488.4 347 72.3
Pp3c5_16770 Physcomitrium patens HOM05D004008 ORTHO05D005383 7.7e-134 481.1 313 77.0
TAR624G0715 Trochodendron aralioides HOM05D004008 ORTHO05D005383 1.3e-133 480.3 317 77.6
BcaC03g13214 Brassica carinata HOM05D004008 ORTHO05D005383 2.9e-133 479.2 355 71.5
Mapoly0015s0060 Marchantia polymorpha HOM05D004008 ORTHO05D005383 5.0e-133 478.4 332 72.6
Pp3c15_6300 Physcomitrium patens HOM05D004008 ORTHO05D005383 5.5e-132 474.9 313 76.4
Pp3c6_15990 Physcomitrium patens HOM05D004008 ORTHO05D005383 5.5e-132 474.9 313 76.0
Oeu001944.1 Olea europaea HOM05D004008 ORTHO05D005383 1.6e-131 473.4 256 96.1
CBR_g48425 Chara braunii HOM05D004008 ORTHO05D005383 2.1e-131 473.0 316 75.0
SMO364G0819 Selaginella moellendorffii HOM05D004008 ORTHO05D005383 8.8e-130 467.6 333 72.7
Zm00001eb233020 Zea mays HOM05D004008 ORTHO05D005383 1.1e-127 460.7 300 76.3
SEGI_21965 Sequoiadendron giganteum HOM05D004008 ORTHO05D005383 1.8e-127 459.9 299 76.6
Cre16.g663900 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D005383 3.4e-113 412.5 297 70.0
Sed0020742 Sechium edule HOM05D004008 ORTHO05D005383 2.3e-109 399.8 250 82.4
MCO01G747 Micromonas commoda HOM05D004008 ORTHO05D005383 6.8e-106 388.3 323 61.9
FvH4_4g37020 Fragaria vesca HOM05D004008 ORTHO05D005383 1.6e-102 377.1 255 79.2
PRCOL_00005560 Prasinoderma coloniale HOM05D004008 ORTHO05D005383 1.6e-94 350.5 290 61.7
AagrBONN_evm.TU.Sc2ySwM_117.3714 Anthoceros agrestis HOM05D004008 ORTHO05D005383 8.6e-93 344.7 268 69.8
Psat5g025240 Pisum sativum HOM05D004008 ORTHO05D005383 1.9e-76 290.4 272 61.4
Nn7g38125 Nelumbo nucifera HOM05D004008 ORTHO05D005383 1.1e-74 284.6 208 73.6
arahy.Tifrunner.gnm1.ann1.VI50KN Arachis hypogaea HOM05D004008 ORTHO05D005383 3.4e-73 279.6 188 78.2
Actinidia07354 Actinidia chinensis HOM05D004008 ORTHO05D005383 9.3e-71 271.6 378 46.0
Haze_26918 Corylus avellana HOM05D004008 ORTHO05D163716 1.6e-67 260.8 358 46.1
Glyma.11G015433 Glycine max HOM05D004008 ORTHO05D005383 2.1e-46 190.7 112 81.2
Psat5g278360 Pisum sativum HOM05D004008 ORTHO05D000002 2.2e-43 180.6 113 79.6
BcaC07g39332 Brassica carinata HOM05D004008 ORTHO05D032875 4.1e-42 176.4 171 62.6
C08p23470 Brassica napus HOM05D004008 ORTHO05D032875 4.1e-42 176.4 171 62.6
BolC8t49976H Brassica oleracea HOM05D004008 ORTHO05D032875 4.1e-42 176.4 171 62.6
Cre02.g113850 Chlamydomonas reinhardtii HOM05D004008 ORTHO05D145669 2.6e-33 147.1 284 34.9
BcaC08g43816 Brassica carinata HOM05D004008 ORTHO05D013026 3.4e-33 146.7 104 68.3
BcaC04g20718 Brassica carinata HOM05D004008 ORTHO05D027220 2.2e-32 144.1 102 69.6
C09p39940 Brassica napus HOM05D004008 ORTHO05D027220 2.2e-32 144.1 102 69.6
C03p57930 Brassica napus HOM05D004008 ORTHO05D027220 1.4e-31 141.4 102 68.6
C02p56520 Brassica napus HOM05D000109 ORTHO05D000210 3.2e-31 140.2 98 69.4
BolC9t56891H Brassica oleracea HOM05D004008 ORTHO05D013026 9.4e-31 138.7 106 65.1
BcaC03g17816 Brassica carinata HOM05D003055 ORTHO05D013026 3.0e-29 133.7 107 60.7
C02p58390 Brassica napus HOM05D003055 ORTHO05D013026 4.4e-28 129.8 106 60.4
TPR.G13755 Trifolium pratense HOM05D004008 ORTHO05D410752 5.3e-18 96.3 67 76.1
BolC3t18065H Brassica oleracea HOM05D003055 ORTHO05D013026 9.1e-18 95.5 64 70.3
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 2.2e-16 90.9 49 89.8
Rhsim06G0151600 Rhododendron simsii HOM05D001371 ORTHO05D001319 2.5e-15 87.4 61 77.0
C05p24790 Brassica napus HOM05D003055 ORTHO05D013026 4.5e-09 66.6 38 76.3
BcaC01g02956 Brassica carinata HOM05D003055 ORTHO05D013026 5.0e-08 63.2 38 73.7


User provided reference genes

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