Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu051307.1 Olea europaea HOM05D005151 ORTHO05D006322 1.8e-66 255.8 125 100.0
Oeu051308.2 Olea europaea HOM05D005151 ORTHO05D006322 2.7e-59 231.9 117 95.7
Oeu054828.1 Olea europaea HOM05D005151 ORTHO05D006322 1.7e-56 222.6 113 94.7
MSTRG.10530 Avicennia marina HOM05D005151 ORTHO05D006322 1.6e-54 216.1 113 92.0
Migut.L01534 Erythranthe guttata HOM05D005151 ORTHO05D006322 1.3e-53 213.0 113 90.3
SalBow1G7018 Salvia bowleyana HOM05D005151 ORTHO05D006322 6.5e-53 210.7 113 90.3
SGA_v2.0_scaffold23G10051 Striga asiatica HOM05D005151 ORTHO05D006322 8.5e-53 210.3 113 88.5
unitig_699.g19288 Utricularia gibba HOM05D005151 ORTHO05D006322 2.5e-52 208.8 113 85.0
Nitab4.5_0000073g0020 Nicotiana tabacum HOM05D005151 ORTHO05D006322 1.0e-45 186.8 112 79.5
Nitab4.5_0002642g0040 Nicotiana tabacum HOM05D005151 ORTHO05D006322 1.1e-44 183.3 112 77.7
Cc06_g11820 Coffea canephora HOM05D005151 ORTHO05D006322 1.2e-43 179.9 113 76.1
Gorai.010G085400 Gossypium raimondii HOM05D005151 ORTHO05D006322 1.6e-43 179.5 113 75.2
CSS0027881 Camellia sinensis var. sinensis HOM05D005151 ORTHO05D006322 2.1e-43 179.1 113 75.2
Gohir.D06G073100 Gossypium hirsutum HOM05D005151 ORTHO05D006322 2.7e-43 178.7 113 74.3
Rhsim03G0230900 Rhododendron simsii HOM05D005151 ORTHO05D006322 2.7e-43 178.7 113 76.1
DCAR_024719 Daucus carota HOM05D005151 ORTHO05D006322 3.6e-43 178.3 113 76.1
Peaxi162Scf00498g00525 Petunia axillaris HOM05D005151 ORTHO05D006322 4.7e-43 177.9 113 77.0
Gohir.D07G013300 Gossypium hirsutum HOM05D005151 ORTHO05D006322 6.1e-43 177.6 113 74.3
Nitab4.5_0002842g0020 Nicotiana tabacum HOM05D005151 ORTHO05D006322 6.1e-43 177.6 112 76.8
vmacro06306 Vaccinium macrocarpon HOM05D005151 ORTHO05D006322 8.0e-43 177.2 113 75.2
Gohir.A06G074300 Gossypium hirsutum HOM05D005151 ORTHO05D006322 1.0e-42 176.8 113 74.3
Gohir.A07G013500 Gossypium hirsutum HOM05D005151 ORTHO05D006322 1.4e-42 176.4 113 73.5
Gorai.001G014000 Gossypium raimondii HOM05D005151 ORTHO05D006322 1.4e-42 176.4 113 73.5
Solyc12g009030.2 Solanum lycopersicum HOM05D005151 ORTHO05D006322 1.4e-42 176.4 112 76.8
Sopen12g003960 Solanum pennellii HOM05D005151 ORTHO05D006322 1.4e-42 176.4 112 76.8
PGSC0003DMG400000330 Solanum tuberosum HOM05D005151 ORTHO05D006322 1.4e-42 176.4 112 76.8
Nitab4.5_0002079g0070 Nicotiana tabacum HOM05D005151 ORTHO05D006322 1.8e-42 176.0 112 75.9
Thecc.09G082600 Theobroma cacao HOM05D005151 ORTHO05D006322 1.8e-42 176.0 113 73.5
Cfa003042 Carpinus fangiana HOM05D005151 ORTHO05D006322 2.3e-42 175.6 113 76.1
PGSC0003DMG400016078 Solanum tuberosum HOM05D005151 ORTHO05D006322 3.0e-42 175.3 112 75.0
Haze_25954 Corylus avellana HOM05D005151 ORTHO05D006322 4.0e-42 174.9 122 70.5
Duzib168G1011 Durio zibethinus HOM05D005151 ORTHO05D006322 4.0e-42 174.9 113 73.5
GSVIVG01015149001 Vitis vinifera HOM05D005151 ORTHO05D006322 4.0e-42 174.9 113 74.3
Sopen07g020370 Solanum pennellii HOM05D005151 ORTHO05D006322 5.2e-42 174.5 112 74.1
Lsat_1_v5_gn_7_34720 Lactuca sativa HOM05D005151 ORTHO05D006322 6.8e-42 174.1 113 71.7
ECA240G1097 Erigeron canadensis HOM05D005151 ORTHO05D006322 8.8e-42 173.7 113 71.7
MD15G1212600 Malus domestica HOM05D005151 ORTHO05D006322 1.2e-41 173.3 113 72.6
TWI63G0393 Tripterygium wilfordii HOM05D005151 ORTHO05D006322 1.2e-41 173.3 113 74.3
CSS0008874 Camellia sinensis var. sinensis HOM05D005151 ORTHO05D006322 1.5e-41 172.9 113 74.3
Ciclev10010808m.g Citrus clementina HOM05D005151 ORTHO05D006322 1.5e-41 172.9 113 72.6
COL.COLO4_18151 Corchorus olitorius HOM05D005151 ORTHO05D006322 1.5e-41 172.9 113 72.6
Hma1.2p1_0672F.1_g200870 Hydrangea macrophylla HOM05D005151 ORTHO05D006322 2.6e-41 172.2 112 73.2
MD02G1085500 Malus domestica HOM05D005151 ORTHO05D006322 2.6e-41 172.2 113 70.8
Solyc07g041080.3 Solanum lycopersicum HOM05D005151 ORTHO05D006322 2.6e-41 172.2 112 74.1
Dinv36800 Davidia involucrata HOM05D005151 ORTHO05D006322 3.4e-41 171.8 113 73.5
PGR142G4460 Punica granatum HOM05D005151 ORTHO05D006322 3.4e-41 171.8 113 73.5
Duzib150G1015 Durio zibethinus HOM05D005151 ORTHO05D006322 4.4e-41 171.4 113 70.8
Potri.006G145800 Populus trichocarpa HOM05D005151 ORTHO05D006322 4.4e-41 171.4 113 69.9
CANSAT56G1855 Cannabis sativa HOM05D005151 ORTHO05D006322 5.7e-41 171.0 113 70.8
Eucgr.C03405 Eucalyptus grandis HOM05D005151 ORTHO05D006322 5.7e-41 171.0 113 74.3
HanXRQChr03g0063021 Helianthus annuus HOM05D005151 ORTHO05D006322 5.7e-41 171.0 113 71.7
Manes.16G098700 Manihot esculenta HOM05D005151 ORTHO05D006322 5.7e-41 171.0 113 71.7
TAR624G0089 Trochodendron aralioides HOM05D005151 ORTHO05D006322 7.5e-41 170.6 112 72.3
CiPaw.03G210900 Carya illinoinensis HOM05D005151 ORTHO05D006322 9.8e-41 170.2 113 73.5
CsaV3_1G040710 Cucumis sativus L. HOM05D005151 ORTHO05D006322 9.8e-41 170.2 113 70.8
Nn8g38754 Nelumbo nucifera HOM05D005151 ORTHO05D006322 9.8e-41 170.2 113 71.7
Sabra06G0115300 Salix brachista HOM05D005151 ORTHO05D006322 9.8e-41 170.2 113 70.8
Actinidia29915 Actinidia chinensis HOM05D005151 ORTHO05D006322 1.7e-40 169.5 113 73.5
CDE05G0358 Ceratophyllum demersum HOM05D005151 ORTHO05D006322 1.7e-40 169.5 113 70.8
Lj4A288G22 Lonicera japonica HOM05D005151 ORTHO05D006322 1.7e-40 169.5 109 74.3
ClCG03G015320 Citrullus lanatus HOM05D005151 ORTHO05D006322 2.2e-40 169.1 113 70.8
PSO210G4100 Papaver somniferum HOM05D005151 ORTHO05D006322 2.2e-40 169.1 113 69.9
PSO210G7456 Papaver somniferum HOM05D005151 ORTHO05D006322 2.2e-40 169.1 113 69.9
Nn6g35560 Nelumbo nucifera HOM05D005151 ORTHO05D006322 2.8e-40 168.7 113 70.8
Atru.chr12.2297 Acer truncatum HOM05D005151 ORTHO05D006322 3.7e-40 168.3 113 71.7
MBI16_g18211_MAGBIO Magnolia biondii HOM05D005151 ORTHO05D006322 3.7e-40 168.3 112 69.6
Prupe.6G180900 Prunus persica HOM05D005151 ORTHO05D006322 3.7e-40 168.3 113 69.9
Actinidia38461 Actinidia chinensis HOM05D005151 ORTHO05D006322 4.8e-40 167.9 124 66.1
THA.LOC104820014 Tarenaya hassleriana HOM05D005151 ORTHO05D006322 4.8e-40 167.9 113 69.9
MELO3C015499.2 Cucumis melo HOM05D005151 ORTHO05D006322 6.3e-40 167.5 113 69.9
Sed0005858 Sechium edule HOM05D005151 ORTHO05D006322 8.3e-40 167.2 113 69.0
Sed0024958 Sechium edule HOM05D005151 ORTHO05D006322 8.3e-40 167.2 113 69.0
Sc09g0008330 Simmondsia chinensis HOM05D005151 ORTHO05D006322 8.3e-40 167.2 113 71.7
TPR.G9439 Trifolium pratense HOM05D005151 ORTHO05D006322 1.1e-39 166.8 113 69.0
Lalb_Chr07g0181001 Lupinus albus HOM05D005151 ORTHO05D006322 2.4e-39 165.6 113 69.0
MBI15_g27849_MAGBIO Magnolia biondii HOM05D005151 ORTHO05D006322 2.4e-39 165.6 112 70.5
Medtr4g125710 Medicago truncatula HOM05D005151 ORTHO05D006322 2.4e-39 165.6 113 68.1
AT4G29830 Arabidopsis thaliana HOM05D005151 ORTHO05D006322 3.1e-39 165.2 113 69.9
CARHR237730 Cardamine hirsuta HOM05D005151 ORTHO05D006322 3.1e-39 165.2 113 69.0
QL02p061718 Quercus lobata HOM05D005151 ORTHO05D006322 3.1e-39 165.2 113 69.9
AL7G22420 Arabidopsis lyrata HOM05D005151 ORTHO05D006322 5.4e-39 164.5 113 69.0
BolC1t00925H Brassica oleracea HOM05D005151 ORTHO05D006322 5.4e-39 164.5 113 69.9
Cpa.g.sc28.112 Carica papaya HOM05D005151 ORTHO05D006322 5.4e-39 164.5 113 69.9
Carub.0004s1480 Capsella rubella HOM05D005151 ORTHO05D006322 7.0e-39 164.1 113 69.0
Glyma.17G052100 Glycine max HOM05D005151 ORTHO05D006322 7.0e-39 164.1 113 69.0
Psat4g016320 Pisum sativum HOM05D005151 ORTHO05D006322 7.0e-39 164.1 113 68.1
FvH4_1g30420 Fragaria vesca HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 67.3
FAN23G2025 Fragaria x ananassa HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 67.3
FAN26G3474 Fragaria x ananassa HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 67.3
FAN28G0640 Fragaria x ananassa HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 67.3
FAN28G1692 Fragaria x ananassa HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 67.3
RcHm_v2.0_Chr3g0490661 Rosa chinensis HOM05D005151 ORTHO05D006322 1.2e-38 163.3 113 68.1
C01p09370 Brassica napus HOM05D005151 ORTHO05D006322 1.6e-38 162.9 113 69.0
BraA01t00781Z Brassica rapa HOM05D005151 ORTHO05D006322 1.6e-38 162.9 113 69.0
AUR62038818 Chenopodium quinoa HOM05D005151 ORTHO05D006322 1.6e-38 162.9 114 70.2
AUR62041890 Chenopodium quinoa HOM05D005151 ORTHO05D006322 1.6e-38 162.9 114 70.2
Ca_21304_v3 Cicer arietinum L. HOM05D005151 ORTHO05D006322 1.6e-38 162.9 113 68.1
Ah.12g064130 Amaranthus hybridus HOM05D005151 ORTHO05D006322 2.0e-38 162.5 114 72.8
A08p19540 Brassica napus HOM05D005151 ORTHO05D006322 2.0e-38 162.5 112 69.6
C03p89080 Brassica napus HOM05D005151 ORTHO05D006322 2.0e-38 162.5 112 69.6
BolC3t21221H Brassica oleracea HOM05D005151 ORTHO05D006322 2.0e-38 162.5 112 69.6
Thhalv10027356m.g Eutrema salsugineum HOM05D005151 ORTHO05D006322 2.0e-38 162.5 113 69.0
Lj4g0018142 Lotus japonicus HOM05D005151 ORTHO05D006322 2.0e-38 162.5 113 68.1
Phvul.003G133800 Phaseolus vulgaris HOM05D005151 ORTHO05D006322 2.0e-38 162.5 113 67.3
Sp7g27640 Schrenkiella parvula HOM05D005151 ORTHO05D006322 2.0e-38 162.5 113 69.0
VMungo1215G2073 Vigna mungo HOM05D005151 ORTHO05D006322 2.0e-38 162.5 113 67.3
BcaC01g01191 Brassica carinata HOM05D005151 ORTHO05D006322 2.7e-38 162.2 112 68.8
Glyma.13G107300 Glycine max HOM05D005151 ORTHO05D006322 2.7e-38 162.2 113 68.1
BcaB03g12621 Brassica carinata HOM05D005151 ORTHO05D006322 3.5e-38 161.8 112 69.6
COL.COLO4_27437 Corchorus olitorius HOM05D005151 ORTHO05D006322 4.5e-38 161.4 112 69.6
Aa31LG2G20710 Aethionema arabicum HOM05D005151 ORTHO05D006322 5.9e-38 161.0 113 67.3
FAN19G1484 Fragaria x ananassa HOM05D005151 ORTHO05D006322 7.7e-38 160.6 113 66.4
Aqoxy7G03996 Aquilegia oxysepala HOM05D005151 ORTHO05D006322 1.0e-37 160.2 113 70.8
arahy.Tifrunner.gnm1.ann1.20C8M4 Arachis hypogaea HOM05D005151 ORTHO05D006322 2.3e-37 159.1 113 65.5
arahy.Tifrunner.gnm1.ann1.7L7952 Arachis hypogaea HOM05D005151 ORTHO05D006322 2.3e-37 159.1 113 65.5
TAR149G0001 Trochodendron aralioides HOM05D005151 ORTHO05D006322 6.5e-37 157.5 105 73.3
EL10Ac2g02619 Beta vulgaris HOM05D005151 ORTHO05D006322 2.5e-36 155.6 115 68.7
SEGI_01394 Sequoiadendron giganteum HOM05D005151 ORTHO05D006322 3.3e-36 155.2 114 61.4
BcaC01g01189 Brassica carinata HOM05D005151 ORTHO05D006322 1.2e-35 153.3 116 65.5
Pp3c2_28090 Physcomitrium patens HOM05D005151 ORTHO05D006322 8.0e-35 150.6 113 60.2
Pp3c2_28110 Physcomitrium patens HOM05D005151 ORTHO05D006322 8.0e-35 150.6 113 60.2
Cfa018999 Carpinus fangiana HOM05D005151 ORTHO05D006322 8.9e-34 147.1 109 66.1
Mapoly0001s0052 Marchantia polymorpha HOM05D005151 ORTHO05D006322 1.7e-32 142.9 113 58.4
AagrBONN_evm.TU.Sc2ySwM_344.5188 Anthoceros agrestis HOM05D005151 ORTHO05D006322 2.2e-32 142.5 113 56.6
AagrBONN_evm.TU.Sc2ySwM_344.2105 Anthoceros agrestis HOM05D005151 ORTHO05D006322 2.8e-32 142.1 113 58.4
Os11g0660300 Oryza sativa ssp. japonica HOM05D005151 ORTHO05D006322 8.3e-32 140.6 116 57.8
Zm00001eb165440 Zea mays HOM05D005151 ORTHO05D006322 4.1e-31 138.3 115 59.1
SMO244G0035 Selaginella moellendorffii HOM05D005151 ORTHO05D006322 4.3e-28 128.3 113 50.4
SHI30700 Sapria himalayana HOM05D005151 ORTHO05D006322 5.6e-28 127.9 113 51.3
CBR_g54314 Chara braunii HOM05D005151 ORTHO05D006322 8.0e-27 124.0 115 51.3
HPP92_018271 Vanilla planifolia HOM05D000049 ORTHO05D000027 6.4e-24 114.4 115 54.8
Cfa018237 Carpinus fangiana HOM05D005151 ORTHO05D006322 1.7e-21 106.3 76 67.1
MCO13G438 Micromonas commoda HOM05D005151 ORTHO05D006322 3.3e-20 102.1 114 48.2
TAR587G0001 Trochodendron aralioides HOM05D005151 ORTHO05D006322 1.1e-18 97.1 62 79.0
Cre11.g468377 Chlamydomonas reinhardtii HOM05D005151 ORTHO05D006322 8.6e-13 77.4 106 38.7
Haze_27115 Corylus avellana HOM05D005151 ORTHO05D006322 2.1e-11 72.8 105 36.2
Pp3c15_21840 Physcomitrium patens HOM05D004386 ORTHO05D005247 4.1e-07 58.5 89 39.3
unitig_85.g27254 Utricularia gibba HOM05D005151 ORTHO05D419688 2.7e-06 55.8 37 75.7


User provided reference genes

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