Gene: Ah.12g064130

General Information

Structural Information

  • Species Amaranthus hybridus
  • Gene Identifier Ah.12g064130
  • Transcript Identifier Ah.12g064130-v1.1.a1
  • Gene Type Coding gene
  • Location AmaHy_arrow1_Scaffold_12 : 20566252-20569109 : positive

Gene Family Information

  • ID HOM05D005151
  • #Genes/#Species 146/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Ah.12g064130-v1.1.a1

Descriptions

  • Description WD repeat-containing protein VIP3 (Protein BOUQUET-1) (boq-1) (Protein SKI8 homolog) (Protein VERNALIZATION INDEPENDENCE 3) (Protein ZWERGERL) (zwg)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1904278
ISO
PLAZA Integrative Orthologypositive regulation of wax biosynthetic process AT4G29830
GO:0016441
ISO
PLAZA Integrative Orthologyposttranscriptional gene silencing AT4G29830
GO:0010452
ISO
PLAZA Integrative Orthologyhistone H3-K36 methylation AT4G29830
GO:0009910
ISO
PLAZA Integrative Orthologynegative regulation of flower development AT4G29830
GO:0051568
ISO
PLAZA Integrative Orthologyhistone H3-K4 methylation AT4G29830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G29830
GO:0016593
ISO
PLAZA Integrative OrthologyCdc73/Paf1 complex AT4G29830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT4G29830
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT4G29830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024977 Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
15.3.5.1.6 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription elongation.PAF1C transcription initiation and elongation complex.component VIP3/SKI8
16.4.1.2.6.3 RNA processing.RNA surveillance.exosome complex.associated co-factor activities.SUPERKILLER (SKI) regulation complex.component SKI8/VIP3