Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu050639.2 Olea europaea HOM05D000283 ORTHO05D005391 0.0e+00 1779.2 987 100.0
Migut.F01533 Erythranthe guttata HOM05D000283 ORTHO05D005391 0.0e+00 1099.0 1151 57.1
CSS0009141 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 0.0e+00 1088.9 1039 60.7
Cc02_g08650 Coffea canephora HOM05D000283 ORTHO05D005391 6.8e-312 1073.5 1000 60.1
Haze_16972 Corylus avellana HOM05D000283 ORTHO05D005391 4.2e-304 1048.1 1040 60.1
Dinv31389 Davidia involucrata HOM05D000283 ORTHO05D005391 1.6e-303 1046.2 925 64.2
Hma1.2p1_0207F.1_g087980 Hydrangea macrophylla HOM05D000283 ORTHO05D005391 4.6e-303 1044.6 1094 55.9
Atru.chr12.592 Acer truncatum HOM05D000283 ORTHO05D005391 7.4e-301 1037.3 1008 58.7
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 3.7e-300 1035.0 1044 59.4
Thecc.10G063000 Theobroma cacao HOM05D000283 ORTHO05D005391 2.6e-298 1028.9 1003 57.2
Cpa.g.sc1.303 Carica papaya HOM05D000283 ORTHO05D005391 4.2e-296 1021.5 1004 59.4
Nitab4.5_0010706g0030 Nicotiana tabacum HOM05D000283 ORTHO05D005391 1.1e-293 1013.4 1035 61.3
TAR633G1628 Trochodendron aralioides HOM05D000283 ORTHO05D005391 2.2e-292 1009.2 1013 57.1
Sopen05g033370 Solanum pennellii HOM05D000283 ORTHO05D005391 1.8e-291 1006.1 995 58.8
Nn2g10554 Nelumbo nucifera HOM05D000283 ORTHO05D005391 1.5e-290 1003.0 1013 56.7
Potri.008G047700 Populus trichocarpa HOM05D000283 ORTHO05D005391 3.4e-290 1001.9 1013 59.4
SalBow6G0521 Salvia bowleyana HOM05D000283 ORTHO05D005391 1.1e-288 996.9 1019 57.2
CiPaw.02G178600 Carya illinoinensis HOM05D000283 ORTHO05D005391 1.6e-287 993.0 1037 59.0
Duzib106G1632 Durio zibethinus HOM05D000283 ORTHO05D005391 1.4e-286 989.9 1005 55.7
Nitab4.5_0000914g0100 Nicotiana tabacum HOM05D000283 ORTHO05D005391 2.6e-285 985.7 1022 60.7
GSVIVG01032627001 Vitis vinifera HOM05D000283 ORTHO05D005391 8.2e-284 980.7 948 58.9
Duzib128G1699 Durio zibethinus HOM05D000283 ORTHO05D005391 1.4e-283 979.9 1007 54.8
Lj8C92G16 Lonicera japonica HOM05D000283 ORTHO05D005391 5.3e-283 978.0 1050 57.2
QL08p057534 Quercus lobata HOM05D000283 ORTHO05D005391 5.3e-283 978.0 1089 56.1
CsaV3_5G006520 Cucumis sativus L. HOM05D000283 ORTHO05D005391 2.0e-282 976.1 1003 55.7
TAR636G1569 Trochodendron aralioides HOM05D000283 ORTHO05D005391 5.9e-282 974.5 1016 55.6
MELO3C023808.2 Cucumis melo HOM05D000283 ORTHO05D005391 1.7e-281 973.0 1003 55.5
RcHm_v2.0_Chr1g0365011 Rosa chinensis HOM05D000283 ORTHO05D005391 1.7e-281 973.0 1017 57.7
Sabra08G0033800 Salix brachista HOM05D000283 ORTHO05D005391 3.8e-281 971.8 1052 56.9
Ciclev10030610m.g Citrus clementina HOM05D000283 ORTHO05D005391 3.2e-280 968.8 1004 56.7
Gorai.011G242800 Gossypium raimondii HOM05D000283 ORTHO05D005391 5.5e-280 968.0 1006 55.2
Gohir.D10G217200 Gossypium hirsutum HOM05D000283 ORTHO05D005391 9.4e-280 967.2 1006 55.1
TWI15G0630 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 1.2e-279 966.8 1046 53.4
Manes.07G106300 Manihot esculenta HOM05D000283 ORTHO05D005391 1.6e-279 966.5 1017 59.0
Sabra10G0165400 Salix brachista HOM05D000283 ORTHO05D005391 4.7e-279 964.9 1041 55.7
Solyc05g054910.3 Solanum lycopersicum HOM05D000283 ORTHO05D005391 8.0e-279 964.1 996 57.2
MD07G1184700 Malus domestica HOM05D000283 ORTHO05D005391 2.6e-277 959.1 1071 52.9
Gohir.A10G208900 Gossypium hirsutum HOM05D000283 ORTHO05D005391 1.3e-276 956.8 1006 54.4
ClCG02G013670 Citrullus lanatus HOM05D000283 ORTHO05D005391 1.4e-275 953.4 1028 54.3
Glyma.20G242100 Glycine max HOM05D000283 ORTHO05D005391 2.4e-275 952.6 1024 53.5
Peaxi162Scf00015g02711 Petunia axillaris HOM05D000283 ORTHO05D005391 2.0e-274 949.5 978 56.9
Glyma.10G292300 Glycine max HOM05D000283 ORTHO05D005391 3.8e-273 945.3 1011 54.1
TWI38G2098 Tripterygium wilfordii HOM05D000283 ORTHO05D005391 9.4e-272 940.6 1070 52.3
arahy.Tifrunner.gnm1.ann1.M4B7ES Arachis hypogaea HOM05D000283 ORTHO05D005391 3.6e-271 938.7 1010 54.4
FAN06G1635 Fragaria x ananassa HOM05D000283 ORTHO05D005391 3.6e-271 938.7 1028 55.4
COL.COLO4_05804 Corchorus olitorius HOM05D000283 ORTHO05D005391 4.7e-271 938.3 1039 52.3
arahy.Tifrunner.gnm1.ann1.79HMAA Arachis hypogaea HOM05D000283 ORTHO05D005391 8.0e-271 937.6 1010 54.3
FvH4_7g20770 Fragaria vesca HOM05D000283 ORTHO05D005391 1.0e-270 937.2 1028 55.4
SGA_v2.0_scaffold291G47345 Striga asiatica HOM05D000283 ORTHO05D005391 1.8e-270 936.4 996 60.1
VMungo0720G2546 Vigna mungo HOM05D000283 ORTHO05D005391 2.3e-270 936.0 1004 53.8
Prupe.2G224600 Prunus persica HOM05D000283 ORTHO05D005391 1.3e-268 930.2 1086 50.8
Sed0010822 Sechium edule HOM05D000283 ORTHO05D005391 9.1e-267 924.1 1001 53.8
MD01G1117300 Malus domestica HOM05D000283 ORTHO05D005391 1.6e-266 923.3 1079 51.4
unitig_749.g14014 Utricularia gibba HOM05D000283 ORTHO05D005391 1.6e-266 923.3 962 57.0
TPR.G10417 Trifolium pratense HOM05D000283 ORTHO05D005391 5.9e-266 921.4 1006 53.4
Sed0023338 Sechium edule HOM05D000283 ORTHO05D005391 1.5e-264 916.8 1039 51.8
Manes.10G039400 Manihot esculenta HOM05D000283 ORTHO05D005391 3.6e-263 912.1 1000 54.6
CANSAT56G0145 Cannabis sativa HOM05D000283 ORTHO05D005391 8.0e-263 911.0 1037 51.8
Lj5g0022773 Lotus japonicus HOM05D000283 ORTHO05D005391 3.0e-262 909.1 1010 53.2
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 6.1e-255 884.8 1006 51.9
AUR62042665 Chenopodium quinoa HOM05D000283 ORTHO05D005391 1.5e-253 880.2 1015 52.9
Aqoxy5G01311 Aquilegia oxysepala HOM05D000283 ORTHO05D005391 4.4e-253 878.6 1066 49.2
Medtr3g073080 Medicago truncatula HOM05D000283 ORTHO05D005391 2.2e-252 876.3 1006 52.7
FAN06G4940 Fragaria x ananassa HOM05D000283 ORTHO05D005391 2.8e-252 875.9 1028 53.4
Potri.010G213700 Populus trichocarpa HOM05D000283 ORTHO05D005391 4.9e-252 875.2 744 63.4
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 4.5e-250 868.6 1027 51.6
Lalb_Chr21g0307161 Lupinus albus HOM05D000283 ORTHO05D005391 5.9e-250 868.2 1010 51.5
MBI05_g22074_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 1.9e-248 863.2 1021 51.7
THA.LOC104809997 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 2.1e-247 859.8 1023 50.9
AUR62025540 Chenopodium quinoa HOM05D000283 ORTHO05D005391 3.6e-247 859.0 1021 51.8
HanXRQChr15g0496771 Helianthus annuus HOM05D000283 ORTHO05D005391 3.6e-247 859.0 1026 52.4
Eucgr.G02777 Eucalyptus grandis HOM05D000283 ORTHO05D005391 2.4e-243 846.3 1002 53.8
CAN.G1602.11 Capsicum annuum HOM05D000283 ORTHO05D005391 4.1e-243 845.5 797 59.7
PSO339G6458 Papaver somniferum HOM05D000283 ORTHO05D005391 1.0e-241 840.9 1145 45.9
PGR142G1216 Punica granatum HOM05D000283 ORTHO05D005391 3.9e-241 839.0 1022 51.3
THA.LOC104824248 Tarenaya hassleriana HOM05D000283 ORTHO05D005391 1.1e-238 830.9 1017 50.1
ATR0681G328 Amborella trichopoda HOM05D000283 ORTHO05D005391 5.2e-238 828.6 965 51.8
ECA232G0450 Erigeron canadensis HOM05D000283 ORTHO05D005391 7.5e-237 824.7 1013 50.6
Ah.16g107830 Amaranthus hybridus HOM05D000283 ORTHO05D005391 5.4e-235 818.5 986 51.1
Thhalv10016180m.g Eutrema salsugineum HOM05D000283 ORTHO05D005391 3.6e-231 805.8 1010 50.0
AT2G39340 Arabidopsis thaliana HOM05D000283 ORTHO05D005391 6.8e-230 801.6 1028 47.8
EL10Ac2g03504 Beta vulgaris HOM05D000283 ORTHO05D005391 2.6e-229 799.7 1007 53.7
Aa31LG5G20290 Aethionema arabicum HOM05D000283 ORTHO05D005391 3.7e-228 795.8 1046 48.6
Sp4g21650 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.4e-228 795.0 1010 49.7
SpUn0018_0020 Schrenkiella parvula HOM05D000283 ORTHO05D005391 6.4e-228 795.0 1010 49.7
Lsat_1_v5_gn_9_66761 Lactuca sativa HOM05D000283 ORTHO05D004861 9.2e-227 791.2 1075 50.2
AL4G36680 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 1.3e-225 787.3 1026 47.6
BcaC02g12050 Brassica carinata HOM05D000283 ORTHO05D005391 1.5e-221 773.9 1023 49.2
C04p08450 Brassica napus HOM05D000283 ORTHO05D005391 1.5e-221 773.9 1023 49.2
PSO384G3825 Papaver somniferum HOM05D000283 ORTHO05D005391 2.2e-220 770.0 1152 43.3
Phvul.007G008100 Phaseolus vulgaris HOM05D000283 ORTHO05D005391 4.2e-219 765.8 843 53.6
CARHR134130 Cardamine hirsuta HOM05D000283 ORTHO05D005391 1.3e-217 760.8 1026 47.5
CDE09G1073 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 7.3e-216 755.0 959 49.0
BolC4t22443H Brassica oleracea HOM05D000283 ORTHO05D005391 1.2e-210 737.6 1017 51.0
CiPaw.01G279800 Carya illinoinensis HOM05D000283 ORTHO05D005391 3.5e-210 736.1 561 69.2
Psat6g239040 Pisum sativum HOM05D000283 ORTHO05D005391 1.9e-208 730.3 681 59.3
A05p07060 Brassica napus HOM05D000283 ORTHO05D005391 7.3e-208 728.4 853 51.8
BraA05t19671Z Brassica rapa HOM05D000283 ORTHO05D005391 7.3e-208 728.4 853 51.8
A04p30550 Brassica napus HOM05D000283 ORTHO05D005391 5.3e-206 722.2 1007 48.3
BraA04t18452Z Brassica rapa HOM05D000283 ORTHO05D005391 6.9e-206 721.8 1007 48.3
Sc20g0002350 Simmondsia chinensis HOM05D000283 ORTHO05D005391 9.3e-203 711.4 888 50.1
Lalb_Chr02g0143871 Lupinus albus HOM05D000283 ORTHO05D005391 1.1e-200 704.5 584 63.7
BcaB02g09134 Brassica carinata HOM05D000283 ORTHO05D005391 8.4e-196 688.3 1034 44.8
BolC4t28220H Brassica oleracea HOM05D000283 ORTHO05D005391 3.2e-195 686.4 1010 45.8
BcaC02g07413 Brassica carinata HOM05D000283 ORTHO05D005391 7.9e-194 681.8 1011 45.2
C04p67220 Brassica napus HOM05D000283 ORTHO05D005391 7.9e-194 681.8 1011 45.2
CDE02G4519 Ceratophyllum demersum HOM05D000283 ORTHO05D005391 1.1e-192 677.9 803 50.4
BcaB06g29078 Brassica carinata HOM05D000283 ORTHO05D005391 2.9e-188 663.3 1031 44.8
Carub.0004s2138 Capsella rubella HOM05D000283 ORTHO05D005391 1.1e-187 661.4 660 57.0
Hund22435 Selenicereus undatus HOM05D000283 ORTHO05D005391 5.7e-176 622.5 495 66.5
HPP92_015567 Vanilla planifolia HOM05D000283 ORTHO05D005391 1.9e-171 607.4 806 46.0
Zm00001eb351500 Zea mays HOM05D000283 ORTHO05D005391 2.5e-171 607.1 811 47.3
Zm00001eb289820 Zea mays HOM05D000283 ORTHO05D005391 6.7e-169 599.0 805 46.7
AL5G26090 Arabidopsis lyrata HOM05D000283 ORTHO05D005391 1.3e-167 594.7 975 41.7
Os05g0462600 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 9.1e-166 588.6 750 48.4
MSTRG.311 Avicennia marina HOM05D000283 ORTHO05D005391 1.5e-165 587.8 399 75.7
Mapoly0013s0152 Marchantia polymorpha HOM05D000283 ORTHO05D005391 3.6e-154 550.1 793 43.8
Os01g0836400 Oryza sativa ssp. japonica HOM05D000283 ORTHO05D005391 5.3e-150 536.2 942 41.5
Actinidia03006 Actinidia chinensis HOM05D000283 ORTHO05D005391 4.1e-142 510.0 335 76.7
AagrBONN_evm.TU.Sc2ySwM_117.607 Anthoceros agrestis HOM05D000283 ORTHO05D005391 4.1e-142 510.0 1059 38.2
Pp3c1_11990 Physcomitrium patens HOM05D000283 ORTHO05D005391 3.8e-140 503.4 867 42.0
Actinidia38225 Actinidia chinensis HOM05D000283 ORTHO05D005391 1.1e-139 501.9 335 75.8
DCAR_027697 Daucus carota HOM05D000283 ORTHO05D005391 4.6e-125 453.4 348 69.0
Oeu058323.4 Olea europaea HOM05D000283 ORTHO05D005391 1.0e-124 452.2 368 73.4
Pp3c2_24860 Physcomitrium patens HOM05D000283 ORTHO05D005391 1.0e-124 452.2 869 38.0
SHI28193 Sapria himalayana HOM05D000283 ORTHO05D005391 1.7e-124 451.4 829 39.3
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 4.9e-119 433.3 512 51.6
CBR_g53551 Chara braunii HOM05D000283 ORTHO05D005391 4.9e-111 406.8 694 41.1
Actinidia29199 Actinidia chinensis HOM05D000283 ORTHO05D005391 1.1e-105 389.0 332 62.7
SMO143G0323 Selaginella moellendorffii HOM05D000283 ORTHO05D005391 2.2e-103 381.3 326 61.3
DCAR_005047 Daucus carota HOM05D000283 ORTHO05D005391 8.1e-98 362.8 565 45.8
DCAR_005053 Daucus carota HOM05D000283 ORTHO05D005391 5.4e-86 323.6 399 49.1
SEGI_11420 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 5.4e-86 323.6 374 51.6
PRCOL_00005565 Prasinoderma coloniale HOM05D000283 ORTHO05D005391 2.0e-59 235.3 336 44.0
SMO141G0080 Selaginella moellendorffii HOM05D000283 ORTHO05D005391 2.6e-56 224.9 225 53.3
CAN.G10752.1 Capsicum annuum HOM05D000283 ORTHO05D005391 2.1e-53 215.3 295 46.1
MCO13G063 Micromonas commoda HOM05D000283 ORTHO05D005391 4.4e-51 207.6 272 42.3
TAR381G1264 Trochodendron aralioides HOM05D000283 ORTHO05D005391 3.1e-49 201.4 275 48.0
Hund28801 Selenicereus undatus HOM05D000283 ORTHO05D005391 4.5e-48 197.6 529 34.4
Hund28802 Selenicereus undatus HOM05D000283 ORTHO05D005391 4.5e-48 197.6 529 34.4
CiPaw.01G279700 Carya illinoinensis HOM05D000283 ORTHO05D005391 5.9e-48 197.2 364 44.8
TAR381G0169 Trochodendron aralioides HOM05D000283 ORTHO05D005391 7.2e-46 190.3 161 64.0
Gohir.D07G196232 Gossypium hirsutum HOM05D000283 ORTHO05D005391 6.1e-45 187.2 108 85.2
Cre06.g258100 Chlamydomonas reinhardtii HOM05D000283 ORTHO05D005391 3.0e-44 184.9 575 28.7
CSS0032527 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D005391 2.0e-43 182.2 178 56.2
QL10p060204 Quercus lobata HOM05D000283 ORTHO05D005391 1.9e-38 165.6 136 66.2
PRCOL_00002713 Prasinoderma coloniale HOM05D000283 ORTHO05D005391 2.5e-38 165.2 288 37.5
MBI05_g32639_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 1.5e-35 156.0 127 63.0
HPP92_015519 Vanilla planifolia HOM05D000283 ORTHO05D005391 1.5e-35 156.0 130 60.0
SHI28196 Sapria himalayana HOM05D000283 ORTHO05D005391 1.7e-34 152.5 136 58.8
SEGI_03051 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 7.0e-33 147.1 127 57.5
MBI05_g30758_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D005391 1.6e-29 136.0 102 61.8
Actinidia29200 Actinidia chinensis HOM05D000283 ORTHO05D019495 1.5e-27 129.4 79 74.7
PGR044G1425 Punica granatum HOM05D000283 ORTHO05D005391 2.6e-27 128.6 85 76.5
SEGI_11289 Sequoiadendron giganteum HOM05D000283 ORTHO05D005391 7.5e-27 127.1 361 35.5
Psat3g183560 Pisum sativum HOM05D000283 ORTHO05D030474 3.7e-26 124.8 75 80.0
Psat3g183640 Pisum sativum HOM05D000283 ORTHO05D030474 2.4e-25 122.1 75 78.7
PSO339G3701 Papaver somniferum HOM05D000283 ORTHO05D005391 1.7e-18 99.4 479 27.6
Medtr1g115940 Medicago truncatula HOM05D000283 ORTHO05D019495 1.3e-15 89.7 158 34.8
CSS0012380 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D043332 1.9e-14 85.9 50 78.0
CSS0035555 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D043332 1.6e-13 82.8 50 74.0
BcaB01g03663 Brassica carinata HOM05D033592 ORTHO05D019495 1.5e-11 76.3 107 47.7
BraA03t11440Z Brassica rapa HOM05D000283 ORTHO05D019495 2.0e-11 75.9 74 54.1
Psat6g098640 Pisum sativum HOM05D000283 ORTHO05D005391 4.4e-11 74.7 52 63.5
Psat1g113360 Pisum sativum HOM05D000283 ORTHO05D030474 9.8e-11 73.6 47 68.1
Nn2g12827 Nelumbo nucifera HOM05D000283 ORTHO05D005391 1.4e-09 69.7 84 53.6
A03p22060 Brassica napus HOM05D000283 ORTHO05D019495 1.6e-08 66.2 59 52.5
Psat7g108960 Pisum sativum HOM05D000283 ORTHO05D030474 7.8e-08 63.9 49 61.2
Lsat_1_v5_gn_8_71460 Lactuca sativa HOM05D006073 ORTHO05D007354 1.5e-06 59.7 68 48.5
Glyma.14G115250 Glycine max HOM05D000283 ORTHO05D212723 3.3e-06 58.5 38 73.7


User provided reference genes

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