Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049481.1 Olea europaea HOM05D005087 ORTHO05D006427 1.8e-57 225.7 113 100.0
Nitab4.5_0002388g0080 Nicotiana tabacum HOM05D005087 ORTHO05D006427 4.8e-47 191.0 108 87.0
MSTRG.17010 Avicennia marina HOM05D005087 ORTHO05D006427 1.8e-46 189.1 106 89.6
Nitab4.5_0000707g0070 Nicotiana tabacum HOM05D005087 ORTHO05D006427 1.8e-46 189.1 108 86.1
Hma1.2p1_0685F.1_g203130 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 4.1e-46 188.0 104 89.4
Hma1.2p1_0685F.1_g203140 Hydrangea macrophylla HOM05D005087 ORTHO05D006427 4.1e-46 188.0 104 89.4
Solyc01g087720.4 Solanum lycopersicum HOM05D005087 ORTHO05D006427 4.1e-46 188.0 108 85.2
Sopen01g034670 Solanum pennellii HOM05D005087 ORTHO05D006427 4.1e-46 188.0 108 85.2
CAN.G219.75 Capsicum annuum HOM05D005087 ORTHO05D006427 1.2e-45 186.4 108 83.3
SGA_v2.0_scaffold119G32758 Striga asiatica HOM05D005087 ORTHO05D006427 1.6e-45 186.0 106 84.9
vmacro21195 Vaccinium macrocarpon HOM05D005087 ORTHO05D006427 1.6e-45 186.0 106 86.8
Migut.B01270 Erythranthe guttata HOM05D005087 ORTHO05D006427 2.0e-45 185.7 106 86.8
Actinidia21541 Actinidia chinensis HOM05D005087 ORTHO05D006427 2.7e-45 185.3 109 84.4
TAR623G1255 Trochodendron aralioides HOM05D005087 ORTHO05D006427 2.7e-45 185.3 106 85.8
Peaxi162Scf00694g00319 Petunia axillaris HOM05D005087 ORTHO05D006427 3.5e-45 184.9 108 85.2
GSVIVG01032195001 Vitis vinifera HOM05D005087 ORTHO05D006427 4.5e-45 184.5 104 87.5
QL04p009808 Quercus lobata HOM05D005087 ORTHO05D006427 1.7e-44 182.6 108 84.3
TAR623G1215 Trochodendron aralioides HOM05D005087 ORTHO05D006427 2.2e-44 182.2 103 87.4
Lj9C640G8 Lonicera japonica HOM05D005087 ORTHO05D006427 2.9e-44 181.8 104 86.5
Sp6g28190 Schrenkiella parvula HOM05D005087 ORTHO05D006427 2.9e-44 181.8 106 84.0
CiPaw.14G002700 Carya illinoinensis HOM05D005087 ORTHO05D006427 5.0e-44 181.0 106 84.0
Atru.chr11.2578 Acer truncatum HOM05D005087 ORTHO05D006427 6.5e-44 180.6 106 84.9
Dinv09311 Davidia involucrata HOM05D005087 ORTHO05D006427 6.5e-44 180.6 104 86.5
Aa31LG11G13680 Aethionema arabicum HOM05D005087 ORTHO05D006427 8.5e-44 180.3 106 83.0
SalBow5G0870 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.5e-44 180.3 104 83.7
SalBow5G2001 Salvia bowleyana HOM05D005087 ORTHO05D006427 8.5e-44 180.3 104 83.7
Lju99A9T21 Lonicera japonica HOM05D005087 ORTHO05D006427 1.1e-43 179.9 104 85.6
Phvul.002G285500 Phaseolus vulgaris HOM05D005087 ORTHO05D006427 1.5e-43 179.5 107 83.2
CSS0029256 Camellia sinensis var. sinensis HOM05D005087 ORTHO05D006427 1.9e-43 179.1 103 85.4
MELO3C023581.2 Cucumis melo HOM05D005087 ORTHO05D006427 1.9e-43 179.1 106 83.0
CsaV3_7G030750 Cucumis sativus L. HOM05D005087 ORTHO05D006427 1.9e-43 179.1 106 83.0
C03p08670 Brassica napus HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 81.1
BolC3t13367H Brassica oleracea HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 81.1
BraA03t10076Z Brassica rapa HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 82.1
Carub.0006s1411 Capsella rubella HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 81.1
Cfa022636 Carpinus fangiana HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 83.0
Haze_03133 Corylus avellana HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 83.0
Haze_03136 Corylus avellana HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 83.0
THA.LOC104819098 Tarenaya hassleriana HOM05D005087 ORTHO05D006427 4.2e-43 177.9 107 83.2
Thecc.05G218700 Theobroma cacao HOM05D005087 ORTHO05D006427 4.2e-43 177.9 106 83.0
A03p07470 Brassica napus HOM05D005087 ORTHO05D006427 5.5e-43 177.6 106 81.1
CARHR197390 Cardamine hirsuta HOM05D005087 ORTHO05D006427 5.5e-43 177.6 107 80.4
Gohir.A13G157100 Gossypium hirsutum HOM05D005087 ORTHO05D006427 5.5e-43 177.6 106 83.0
Thhalv10012535m.g Eutrema salsugineum HOM05D005087 ORTHO05D006427 7.2e-43 177.2 106 81.1
AUR62023092 Chenopodium quinoa HOM05D005087 ORTHO05D006427 9.4e-43 176.8 107 82.2
ClCG09G004390 Citrullus lanatus HOM05D005087 ORTHO05D006427 9.4e-43 176.8 106 82.1
TWI09G0473 Tripterygium wilfordii HOM05D005087 ORTHO05D006427 9.4e-43 176.8 106 83.0
AT5G15920 Arabidopsis thaliana HOM05D005087 ORTHO05D006427 1.2e-42 176.4 106 81.1
Duzib177G0717 Durio zibethinus HOM05D005087 ORTHO05D006427 1.2e-42 176.4 106 82.1
AL6G26800 Arabidopsis lyrata HOM05D005087 ORTHO05D006427 1.6e-42 176.0 106 81.1
Rhsim01G0127000 Rhododendron simsii HOM05D005087 ORTHO05D006427 1.6e-42 176.0 106 82.1
AUR62009415 Chenopodium quinoa HOM05D005087 ORTHO05D006427 2.1e-42 175.6 107 81.3
PGR031G1517 Punica granatum HOM05D005087 ORTHO05D006427 2.7e-42 175.3 104 82.7
Gohir.D13G161900 Gossypium hirsutum HOM05D005087 ORTHO05D006427 3.6e-42 174.9 106 81.1
Gorai.013G183900 Gossypium raimondii HOM05D005087 ORTHO05D006427 3.6e-42 174.9 106 81.1
Lj3g0015731 Lotus japonicus HOM05D005087 ORTHO05D006427 3.6e-42 174.9 107 81.3
Glyma.20G198300 Glycine max HOM05D005087 ORTHO05D006427 4.7e-42 174.5 107 81.3
Prupe.2G022000 Prunus persica HOM05D005087 ORTHO05D006427 4.7e-42 174.5 106 83.0
Sabra16G0161000 Salix brachista HOM05D005087 ORTHO05D006427 4.7e-42 174.5 109 78.9
Hund09862 Selenicereus undatus HOM05D005087 ORTHO05D006427 1.0e-41 173.3 104 81.7
Ciclev10030582m.g Citrus clementina HOM05D005087 ORTHO05D006427 1.4e-41 172.9 106 81.1
Lsat_1_v5_gn_1_103161 Lactuca sativa HOM05D005087 ORTHO05D006427 1.4e-41 172.9 106 78.3
Psat6g018320 Pisum sativum HOM05D005087 ORTHO05D006427 1.4e-41 172.9 107 81.3
Potri.001G262600 Populus trichocarpa HOM05D005087 ORTHO05D006427 1.8e-41 172.6 109 78.0
TPR.G14572 Trifolium pratense HOM05D005087 ORTHO05D006427 4.0e-41 171.4 107 80.4
Sc10g0000340 Simmondsia chinensis HOM05D005087 ORTHO05D006427 6.8e-41 170.6 104 79.8
Lj3g0013327 Lotus japonicus HOM05D005087 ORTHO05D006427 8.8e-41 170.2 107 77.6
ECA248G2604 Erigeron canadensis HOM05D005087 ORTHO05D006427 1.2e-40 169.9 107 75.7
HanXRQChr01g0007751 Helianthus annuus HOM05D005087 ORTHO05D006427 1.2e-40 169.9 107 75.7
SHI04082 Sapria himalayana HOM05D005087 ORTHO05D006427 1.2e-40 169.9 106 79.2
Cc00_g23000 Coffea canephora HOM05D005087 ORTHO05D006427 3.4e-40 168.3 106 78.3
Eucgr.G03334 Eucalyptus grandis HOM05D005087 ORTHO05D006427 5.7e-40 167.5 106 77.4
Lalb_Chr04g0263871 Lupinus albus HOM05D005087 ORTHO05D006427 9.8e-40 166.8 107 77.6
RcHm_v2.0_Chr1g0317911 Rosa chinensis HOM05D005087 ORTHO05D006427 9.8e-40 166.8 106 79.2
arahy.Tifrunner.gnm1.ann1.1A5L99 Arachis hypogaea HOM05D005087 ORTHO05D006427 3.7e-39 164.9 107 77.6
CANSAT80G0443 Cannabis sativa HOM05D005087 ORTHO05D006427 6.3e-39 164.1 106 76.4
MD07G1021900 Malus domestica HOM05D005087 ORTHO05D006427 6.3e-39 164.1 106 75.5
ATR0626G229 Amborella trichopoda HOM05D005087 ORTHO05D006427 8.3e-39 163.7 104 77.9
Medtr3g033470 Medicago truncatula HOM05D005087 ORTHO05D006427 8.3e-39 163.7 107 76.6
FAN10G1149 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.4e-38 162.9 107 78.5
MBI11_g23277_MAGBIO Magnolia biondii HOM05D005087 ORTHO05D006427 1.4e-38 162.9 106 78.3
Medtr4g115050 Medicago truncatula HOM05D005087 ORTHO05D006427 1.4e-38 162.9 107 76.6
arahy.Tifrunner.gnm1.ann1.JJ1LEU Arachis hypogaea HOM05D005087 ORTHO05D006427 1.8e-38 162.5 107 76.6
FvH4_7g01640 Fragaria vesca HOM05D005087 ORTHO05D006427 1.8e-38 162.5 107 78.5
FAN06G3789 Fragaria x ananassa HOM05D005087 ORTHO05D006427 1.8e-38 162.5 107 78.5
FAN03G0563 Fragaria x ananassa HOM05D005087 ORTHO05D006427 3.1e-38 161.8 107 78.5
Hund09856 Selenicereus undatus HOM05D005087 ORTHO05D006427 3.1e-38 161.8 103 76.7
Aqoxy1G00327 Aquilegia oxysepala HOM05D005087 ORTHO05D006427 7.0e-38 160.6 108 73.1
DCAR_029700 Daucus carota HOM05D005087 ORTHO05D006427 1.2e-37 159.8 106 72.6
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 1.6e-37 159.5 105 73.3
EL10Ac2g04364 Beta vulgaris HOM05D005087 ORTHO05D006427 2.7e-37 158.7 126 65.1
Ca_14518_v3 Cicer arietinum L. HOM05D005087 ORTHO05D006427 4.5e-37 157.9 105 75.2
Manes.10G136400 Manihot esculenta HOM05D005087 ORTHO05D006427 5.9e-37 157.5 99 75.8
PSO210G7144 Papaver somniferum HOM05D005087 ORTHO05D006427 5.9e-37 157.5 103 72.8
Zm00001eb225540 Zea mays HOM05D005087 ORTHO05D006427 7.7e-37 157.1 104 70.2
SEGI_29436 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 2.2e-36 155.6 107 72.9
Os05g0596600 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 1.5e-35 152.9 106 66.0
BcaB01g05014 Brassica carinata HOM05D005087 ORTHO05D006427 2.5e-35 152.1 106 73.6
PSO339G3397 Papaver somniferum HOM05D005087 ORTHO05D006427 2.5e-35 152.1 103 71.8
SEGI_00270 Sequoiadendron giganteum HOM05D005087 ORTHO05D006427 5.5e-35 151.0 104 72.1
Mapoly0007s0066 Marchantia polymorpha HOM05D005087 ORTHO05D006427 3.6e-34 148.3 106 67.9
Medtr5g036370 Medicago truncatula HOM05D005087 ORTHO05D006427 6.1e-34 147.5 107 71.0
Pp3c24_4940 Physcomitrium patens HOM05D005087 ORTHO05D006427 4.0e-33 144.8 110 63.6
SMO143G0265 Selaginella moellendorffii HOM05D005087 ORTHO05D006427 2.0e-32 142.5 109 61.5
CDE09G1121 Ceratophyllum demersum HOM05D005087 ORTHO05D006427 5.7e-32 141.0 94 74.5
AagrBONN_evm.TU.Sc2ySwM_344.2054 Anthoceros agrestis HOM05D005087 ORTHO05D006427 5.4e-30 134.4 107 59.8
Os11g0572900 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 4.7e-26 121.3 79 72.2
unitig_22.g5433 Utricularia gibba HOM05D005087 ORTHO05D006427 9.2e-22 107.1 55 92.7
PRCOL_00002930 Prasinoderma coloniale HOM05D005087 ORTHO05D006427 3.0e-20 102.1 107 50.5
MCO04G035 Micromonas commoda HOM05D005087 ORTHO05D006427 6.6e-20 100.9 105 44.8
Cfa027028 Carpinus fangiana HOM05D005087 ORTHO05D006427 4.7e-18 94.7 108 46.3
Cpa.g.sc125.40 Carica papaya HOM05D005087 ORTHO05D006427 4.9e-15 84.7 52 76.9
Cre10.g440200 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 6.4e-15 84.3 98 45.9
Nn7g36293 Nelumbo nucifera HOM05D005087 ORTHO05D006427 1.4e-14 83.2 54 74.1
Os11g0577350 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 6.0e-13 77.8 52 69.2
Actinidia13977 Actinidia chinensis HOM05D005087 ORTHO05D006427 1.3e-12 76.6 41 87.8
CBR_g88572 Chara braunii HOM05D005087 ORTHO05D000002 4.3e-11 71.6 50 66.0
Os11g0577300 Oryza sativa ssp. japonica HOM05D005087 ORTHO05D006427 4.7e-10 68.2 52 63.5
Cre10.g440300 Chlamydomonas reinhardtii HOM05D005087 ORTHO05D006427 3.1e-09 65.5 92 37.0
Haze_26632 Corylus avellana HOM05D004178 ORTHO05D005204 3.4e-08 62.0 77 37.7
Cfa025728 Carpinus fangiana HOM05D004178 ORTHO05D005204 4.9e-07 58.2 78 37.2
MCO11G708 Micromonas commoda HOM05D004178 ORTHO05D005204 5.4e-06 54.7 113 29.2
HanXRQChr01g0028141 Helianthus annuus HOM05D004178 ORTHO05D005204 9.2e-06 53.9 83 28.9
PGR042G0822 Punica granatum HOM05D004178 ORTHO05D005204 9.2e-06 53.9 113 31.9


User provided reference genes

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