Gene: Cre10.g440300
General Information
Structural Information
- Species Chlamydomonas reinhardtii
- Gene Identifier Cre10.g440300
- Transcript Identifier Cre10.g440300.t1.1
- Gene Type Coding gene
- Location chromosome_10 : 2921603-2930063 : negative
Gene Family Information
- ID HOM05D005087
- #Genes/#Species 147/97
- Phylogenetic origin
- ID ORTHO05D006427
- #Genes/#Species 143/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Cre10.g440300.v5.5
- pacid 30789796
- alias g10838.t1
- geneName SMC5A
- uniprot A8IIJ1
Descriptions
- Description Structural Maintenance of Chromosomes protein
- Description Subunit of the condensin complex, which reorganizes chromosomes during cell division; coiled-coil protein of the SMC family involved in chromosome condensation and segregation. This is one of two SMC5 models near each other on scaffold 10.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0007062 | IEA | GOA Database | sister chromatid cohesion | |
| GO:0007062 | IEA | InterPro | sister chromatid cohesion | |
| GO:0000724 | IEA | GOA Database | double-strand break repair via homologous recombination | |
| GO:0000724 | IEA | InterPro | double-strand break repair via homologous recombination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0030915 | IEA | GOA Database | Smc5-Smc6 complex | |
| GO:0030915 | IEA | InterPro | Smc5-Smc6 complex | |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT5G15920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.3.6.1.1 | DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.component SMC5 |