Gene: Pp3c24_4940

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c24_4940
  • Transcript Identifier Pp3c24_4940V3.2
  • Gene Type Coding gene
  • Location Chr24 : 3474627-3485498 : positive

Gene Family Information

  • ID HOM05D005087
  • #Genes/#Species 147/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c24_4940V3.2
  • pacid 32909829
  • alias Phpat.024G016600
  • alias Phypa_223981
  • alias Pp1s274_85V6
  • uniprot A0A2K1IFJ5

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000724
IEA
GOA Databasedouble-strand break repair via homologous recombination
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IEA
InterProDNA repair
GO:0007062
IEA
GOA Databasesister chromatid cohesion
GO:0007062
IEA
InterProsister chromatid cohesion

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030915
IEA
GOA DatabaseSmc5-Smc6 complex
GO:0030915
IEA
InterProSmc5-Smc6 complex
GO:0005634
IEA
GOA Databasenucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G15920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR027131 Structural maintenance of chromosomes protein 5
IPR003395 RecF/RecN/SMC, N-terminal
Mapman id Description
14.3.6.1.1 DNA damage response.homologous recombination repair (HR).Smc5-Smc6 complex.NSE2-SMC5-SMC6 subcomplex.component SMC5