Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu049381.1 Olea europaea HOM05D001724 ORTHO05D007284 5.8e-30 133.7 71 100.0
Oeu049406.1 Olea europaea HOM05D001724 ORTHO05D007284 3.3e-09 64.7 68 57.4
TPR.G8601 Trifolium pratense HOM05D001724 ORTHO05D007284 1.6e-08 62.4 68 55.9
Cc05_g15000 Coffea canephora HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
Dinv10341 Davidia involucrata HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
Lj8C179G13 Lonicera japonica HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
LjContig00081g0019548 Lotus japonicus HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
PSO541G6316 Papaver somniferum HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
PSO675G5997 Papaver somniferum HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 55.9
vmacro11596 Vaccinium macrocarpon HOM05D001724 ORTHO05D007284 2.8e-08 61.6 68 54.4
Eucgr.F03687 Eucalyptus grandis HOM05D001724 ORTHO05D007284 3.6e-08 61.2 68 54.4
Actinidia30393 Actinidia chinensis HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
arahy.Tifrunner.gnm1.ann1.AFR4D1 Arachis hypogaea HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
arahy.Tifrunner.gnm1.ann1.HGG2PG Arachis hypogaea HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
Cpa.g.sc12.118 Carica papaya HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
Ca_06399_v3 Cicer arietinum L. HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
Ciclev10010260m.g Citrus clementina HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
Lalb_Chr10g0107431 Lupinus albus HOM05D001724 ORTHO05D007284 6.2e-08 60.5 68 54.4
TAR629G2623 Trochodendron aralioides HOM05D001724 ORTHO05D007284 6.2e-08 60.5 70 54.3
Atru.BG.138.p Acer truncatum HOM05D001724 ORTHO05D007284 8.1e-08 60.1 68 54.4
Medtr5g096020 Medicago truncatula HOM05D001724 ORTHO05D007284 8.1e-08 60.1 68 52.9
SEGI_07558 Sequoiadendron giganteum HOM05D001724 ORTHO05D007284 8.1e-08 60.1 68 55.9
CSS0036592 Camellia sinensis var. sinensis HOM05D001724 ORTHO05D007284 1.1e-07 59.7 68 52.9
Manes.15G059300 Manihot esculenta HOM05D001724 ORTHO05D007284 1.1e-07 59.7 68 52.9
Aqoxy4G02217 Aquilegia oxysepala HOM05D001724 ORTHO05D007284 1.4e-07 59.3 68 52.9
FAN21G0812 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.4e-07 59.3 68 54.4
Psat2g007080 Pisum sativum HOM05D001724 ORTHO05D007284 1.4e-07 59.3 68 52.9
Rhsim06G0230500 Rhododendron simsii HOM05D001724 ORTHO05D007284 1.4e-07 59.3 68 54.4
THA.LOC104815694 Tarenaya hassleriana HOM05D001724 ORTHO05D007284 1.4e-07 59.3 68 52.9
Aa31LG8G390 Aethionema arabicum HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 51.5
Ah.04g166610 Amaranthus hybridus HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 52.9
EL10Ac4g07557 Beta vulgaris HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 54.4
FvH4_3g42960 Fragaria vesca HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 54.4
FAN11G2991 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 54.4
FAN25G0452 Fragaria x ananassa HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 54.4
Peaxi162Scf00006g00319 Petunia axillaris HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 52.9
RcHm_v2.0_Chr5g0077011 Rosa chinensis HOM05D001724 ORTHO05D007284 1.8e-07 58.9 68 54.4
COL.COLO4_09842 Corchorus olitorius HOM05D001724 ORTHO05D007284 2.4e-07 58.5 68 52.9
Glyma.02G301000 Glycine max HOM05D001724 ORTHO05D007284 2.4e-07 58.5 68 52.9
Gohir.D01G062200 Gossypium hirsutum HOM05D001724 ORTHO05D007284 2.4e-07 58.5 68 52.9
Gorai.002G100800 Gossypium raimondii HOM05D001724 ORTHO05D007284 2.4e-07 58.5 68 52.9
Thecc.07G012400 Theobroma cacao HOM05D001724 ORTHO05D007284 2.4e-07 58.5 68 52.9
CANSAT11G0717 Cannabis sativa HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 52.9
Thhalv10020504m.g Eutrema salsugineum HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
Gohir.A01G092000 Gossypium hirsutum HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
Phvul.008G279400 Phaseolus vulgaris HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
SalBow8G2422 Salvia bowleyana HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
Hund01886 Selenicereus undatus HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
VMungo0647G0703 Vigna mungo HOM05D001724 ORTHO05D007284 3.1e-07 58.2 68 51.5
ATR0751G043 Amborella trichopoda HOM05D001724 ORTHO05D007284 4.0e-07 57.8 68 54.4
MD03G1027000 Malus domestica HOM05D001724 ORTHO05D007284 4.0e-07 57.8 68 52.9
Potri.001G368500 Populus trichocarpa HOM05D001724 ORTHO05D007284 4.0e-07 57.8 68 52.9
Sabra16G0241600 Salix brachista HOM05D001724 ORTHO05D007284 4.0e-07 57.8 68 52.9
AL3G24930 Arabidopsis lyrata HOM05D001724 ORTHO05D007284 5.2e-07 57.4 68 51.5
AT3G13180 Arabidopsis thaliana HOM05D001724 ORTHO05D007284 5.2e-07 57.4 68 51.5
Haze_09831 Corylus avellana HOM05D001724 ORTHO05D007284 5.2e-07 57.4 68 52.9
Duzib268G0190 Durio zibethinus HOM05D001724 ORTHO05D007284 5.2e-07 57.4 68 51.5
Prupe.6G024300 Prunus persica HOM05D001724 ORTHO05D007284 5.2e-07 57.4 68 51.5
Cfa020185 Carpinus fangiana HOM05D001724 ORTHO05D007284 6.8e-07 57.0 68 52.9
Solyc12g015710.2 Solanum lycopersicum HOM05D001724 ORTHO05D007284 6.8e-07 57.0 68 51.5
Sopen12g007630 Solanum pennellii HOM05D001724 ORTHO05D007284 6.8e-07 57.0 68 51.5
PGSC0003DMG402029795 Solanum tuberosum HOM05D001724 ORTHO05D007284 6.8e-07 57.0 68 51.5
TWI56G0926 Tripterygium wilfordii HOM05D001724 ORTHO05D007284 6.8e-07 57.0 68 52.9
CiPaw.12G138600 Carya illinoinensis HOM05D001724 ORTHO05D007284 8.9e-07 56.6 68 51.5
QL08p003952 Quercus lobata HOM05D001724 ORTHO05D007284 8.9e-07 56.6 68 51.5
FvH4_3g43140 Fragaria vesca HOM05D001724 ORTHO05D007284 1.2e-06 56.2 68 51.5
PGR031G2084 Punica granatum HOM05D001724 ORTHO05D007284 1.2e-06 56.2 68 51.5
GSVIVG01014695001 Vitis vinifera HOM05D001724 ORTHO05D007284 1.2e-06 56.2 68 51.5
MSTRG.15797 Avicennia marina HOM05D001724 ORTHO05D007284 1.5e-06 55.8 68 51.5
Migut.M01648 Erythranthe guttata HOM05D001724 ORTHO05D007284 1.5e-06 55.8 68 51.5
Sc03g0011450 Simmondsia chinensis HOM05D001724 ORTHO05D007284 1.5e-06 55.8 68 50.0
Carub.0003s1253 Capsella rubella HOM05D001724 ORTHO05D007284 2.0e-06 55.5 68 50.0
AUR62017112 Chenopodium quinoa HOM05D001724 ORTHO05D007284 2.0e-06 55.5 68 51.5
Nitab4.5_0000163g0170 Nicotiana tabacum HOM05D001724 ORTHO05D007284 2.0e-06 55.5 68 50.0
ECA236G1337 Erigeron canadensis HOM05D001724 ORTHO05D007284 2.6e-06 55.1 68 51.5
Lsat_1_v5_gn_7_114320 Lactuca sativa HOM05D001724 ORTHO05D007284 2.6e-06 55.1 68 51.5
BcaB04g21001 Brassica carinata HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
A01p40360 Brassica napus HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
C01p51890 Brassica napus HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
BolC1t05137H Brassica oleracea HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
BraA01t04071Z Brassica rapa HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
HanXRQChr15g0492631 Helianthus annuus HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
Sp3g11360 Schrenkiella parvula HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
SGA_v2.0_scaffold168G38565 Striga asiatica HOM05D001724 ORTHO05D007284 3.4e-06 54.7 68 50.0
DCAR_022608 Daucus carota HOM05D001724 ORTHO05D007284 7.6e-06 53.5 68 50.0
CAN.G325.2 Capsicum annuum HOM05D001724 ORTHO05D007284 9.9e-06 53.1 68 48.5
Pp3c27_2290 Physcomitrium patens HOM05D001724 ORTHO05D007284 9.9e-06 53.1 68 44.1


User provided reference genes

Program Settings