Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu048685.1 Olea europaea HOM05D005263 ORTHO05D006891 2.9e-79 298.5 151 100.0
Gorai.006G000100 Gossypium raimondii HOM05D005263 ORTHO05D006891 1.6e-69 266.2 151 87.4
Gohir.A09G000037 Gossypium hirsutum HOM05D005263 ORTHO05D006891 2.1e-69 265.8 151 87.4
Gohir.D09G000101 Gossypium hirsutum HOM05D005263 ORTHO05D006891 2.1e-69 265.8 151 87.4
Hma1.2p1_0265F.1_g106760 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 5.1e-68 261.2 150 86.7
Hma1.2p1_0265F.1_g106780 Hydrangea macrophylla HOM05D005263 ORTHO05D006891 5.1e-68 261.2 150 86.7
DCAR_000962 Daucus carota HOM05D005263 ORTHO05D006891 8.7e-68 260.4 151 85.4
Eucgr.I01574 Eucalyptus grandis HOM05D005263 ORTHO05D006891 1.9e-67 259.2 151 86.8
Thecc.04G050600 Theobroma cacao HOM05D005263 ORTHO05D006891 2.5e-67 258.8 151 85.4
Gohir.A09G000300 Gossypium hirsutum HOM05D005263 ORTHO05D006891 3.3e-67 258.5 151 84.8
Migut.F00003 Erythranthe guttata HOM05D005263 ORTHO05D006891 9.6e-67 256.9 151 84.8
Cpa.g.sc70.43 Carica papaya HOM05D005263 ORTHO05D006891 1.3e-66 256.5 151 85.4
SalBow4G2620 Salvia bowleyana HOM05D005263 ORTHO05D006891 2.1e-66 255.8 151 85.4
Prupe.3G314900 Prunus persica HOM05D005263 ORTHO05D006891 2.8e-66 255.4 151 85.4
CSS0025694 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 3.6e-66 255.0 151 84.1
Aqoxy5G03006 Aquilegia oxysepala HOM05D005263 ORTHO05D006891 6.2e-66 254.2 151 85.4
Nitab4.5_0000519g0290 Nicotiana tabacum HOM05D005263 ORTHO05D006891 6.2e-66 254.2 151 84.1
CAN.G473.163 Capsicum annuum HOM05D005263 ORTHO05D006891 8.1e-66 253.8 151 83.4
Solyc02g094590.3 Solanum lycopersicum HOM05D005263 ORTHO05D006891 8.1e-66 253.8 151 83.4
Sopen02g039240 Solanum pennellii HOM05D005263 ORTHO05D006891 8.1e-66 253.8 151 83.4
Actinidia36248 Actinidia chinensis HOM05D005263 ORTHO05D006891 1.4e-65 253.1 151 85.4
TWI60G0166 Tripterygium wilfordii HOM05D005263 ORTHO05D006891 1.4e-65 253.1 151 84.1
GSVIVG01032955001 Vitis vinifera HOM05D005263 ORTHO05D006891 2.4e-65 252.3 151 83.4
Potri.014G145000 Populus trichocarpa HOM05D005263 ORTHO05D006891 4.0e-65 251.5 151 82.8
Nitab4.5_0002901g0080 Nicotiana tabacum HOM05D005263 ORTHO05D006891 6.9e-65 250.8 151 82.8
Potri.002G237400 Populus trichocarpa HOM05D005263 ORTHO05D006891 6.9e-65 250.8 151 81.5
MSTRG.3034 Avicennia marina HOM05D005263 ORTHO05D006891 1.2e-64 250.0 151 82.1
CSS0005310 Camellia sinensis var. sinensis HOM05D005263 ORTHO05D006891 2.6e-64 248.8 147 84.4
Duzib147G0290 Durio zibethinus HOM05D005263 ORTHO05D006891 2.6e-64 248.8 151 84.1
Manes.11G073900 Manihot esculenta HOM05D005263 ORTHO05D006891 2.6e-64 248.8 151 82.8
Cc07_g01440 Coffea canephora HOM05D005263 ORTHO05D006891 4.5e-64 248.1 151 80.8
FvH4_6g54430 Fragaria vesca HOM05D005263 ORTHO05D006891 4.5e-64 248.1 151 82.8
CiPaw.03G000400 Carya illinoinensis HOM05D005263 ORTHO05D006891 7.6e-64 247.3 151 82.8
CARHR074870 Cardamine hirsuta HOM05D005263 ORTHO05D006891 9.9e-64 246.9 151 78.8
TAR622G0136 Trochodendron aralioides HOM05D005263 ORTHO05D006891 9.9e-64 246.9 147 83.7
Ciclev10017439m.g Citrus clementina HOM05D005263 ORTHO05D006891 1.3e-63 246.5 151 80.1
FAN05G5194 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.3e-63 246.5 151 82.1
CANSAT64G2729 Cannabis sativa HOM05D005263 ORTHO05D006891 1.7e-63 246.1 151 82.1
FAN09G1249 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.7e-63 246.1 151 82.8
RcHm_v2.0_Chr2g0176681 Rosa chinensis HOM05D005263 ORTHO05D006891 1.7e-63 246.1 151 82.8
Sabra14G0109200 Salix brachista HOM05D005263 ORTHO05D006891 2.2e-63 245.7 151 81.5
Sabra02G0180900 Salix brachista HOM05D005263 ORTHO05D006891 2.9e-63 245.4 151 80.1
FAN02G2182 Fragaria x ananassa HOM05D005263 ORTHO05D006891 3.8e-63 245.0 149 82.6
MD17G1004500 Malus domestica HOM05D005263 ORTHO05D006891 8.4e-63 243.8 151 81.5
PGR142G1885 Punica granatum HOM05D005263 ORTHO05D006891 8.4e-63 243.8 151 79.5
AL3G10030 Arabidopsis lyrata HOM05D005263 ORTHO05D006891 1.1e-62 243.4 151 79.5
BcaNung05595 Brassica carinata HOM05D005263 ORTHO05D006891 1.1e-62 243.4 151 79.5
BcaNung05596 Brassica carinata HOM05D005263 ORTHO05D006891 1.1e-62 243.4 151 79.5
AT3G02060 Arabidopsis thaliana HOM05D005263 ORTHO05D006891 1.9e-62 242.7 151 79.5
Carub.0003s0003 Capsella rubella HOM05D005263 ORTHO05D006891 3.2e-62 241.9 151 78.8
Glyma.19G106000 Glycine max HOM05D005263 ORTHO05D006891 3.2e-62 241.9 151 78.1
Sp3g00030 Schrenkiella parvula HOM05D005263 ORTHO05D006891 3.2e-62 241.9 151 78.1
Glyma.16G046000 Glycine max HOM05D005263 ORTHO05D006891 4.2e-62 241.5 151 78.8
CDE02G2322 Ceratophyllum demersum HOM05D005263 ORTHO05D006891 2.1e-61 239.2 151 77.5
SGA_v2.0_scaffold274G46526 Striga asiatica HOM05D005263 ORTHO05D006891 2.7e-61 238.8 151 76.2
Phvul.001G099500 Phaseolus vulgaris HOM05D005263 ORTHO05D006891 4.6e-61 238.0 151 77.5
Lalb_Chr14g0363581 Lupinus albus HOM05D005263 ORTHO05D006891 6.0e-61 237.7 151 77.5
MELO3C005086.2 Cucumis melo HOM05D005263 ORTHO05D006891 1.0e-60 236.9 151 77.5
Dinv33264 Davidia involucrata HOM05D005263 ORTHO05D006891 1.8e-60 236.1 135 87.4
Thhalv10020076m.g Eutrema salsugineum HOM05D005263 ORTHO05D006891 3.0e-60 235.3 151 77.5
Sed0001423 Sechium edule HOM05D005263 ORTHO05D006891 3.9e-60 235.0 149 78.5
Aa31LG5G11240 Aethionema arabicum HOM05D005263 ORTHO05D006891 6.7e-60 234.2 151 75.5
PSO478G0722 Papaver somniferum HOM05D005263 ORTHO05D006891 6.7e-60 234.2 151 78.8
PSO017G0637 Papaver somniferum HOM05D005263 ORTHO05D006891 3.3e-59 231.9 151 78.1
VMungo1383G1213 Vigna mungo HOM05D005263 ORTHO05D006891 5.6e-59 231.1 148 77.0
Lj1g0009319 Lotus japonicus HOM05D005263 ORTHO05D006891 9.6e-59 230.3 151 74.8
unitig_52.g17691 Utricularia gibba HOM05D005263 ORTHO05D006891 1.3e-58 229.9 151 74.2
Ca_08228_v3 Cicer arietinum L. HOM05D005263 ORTHO05D006891 6.2e-58 227.6 151 72.8
arahy.Tifrunner.gnm1.ann1.R16MRH Arachis hypogaea HOM05D005263 ORTHO05D006891 6.9e-57 224.2 151 73.5
FAN14G4399 Fragaria x ananassa HOM05D005263 ORTHO05D006891 1.3e-55 219.9 208 60.1
Medtr7g084560 Medicago truncatula HOM05D005263 ORTHO05D006891 3.8e-55 218.4 151 70.2
TPR.G26435 Trifolium pratense HOM05D005263 ORTHO05D006891 7.1e-54 214.2 149 67.8
ECA238G3309 Erigeron canadensis HOM05D005263 ORTHO05D006891 1.6e-53 213.0 151 67.5
ATR0582G042 Amborella trichopoda HOM05D005263 ORTHO05D006891 3.5e-53 211.8 151 70.2
Zm00001eb113530 Zea mays HOM05D005263 ORTHO05D006891 7.4e-51 204.1 151 65.6
HanXRQChr14g0451541 Helianthus annuus HOM05D005263 ORTHO05D006891 2.1e-50 202.6 151 66.2
QL02p068698 Quercus lobata HOM05D005263 ORTHO05D006891 1.1e-49 200.3 117 83.8
COL.COLO4_13398 Corchorus olitorius HOM05D005263 ORTHO05D006891 3.1e-49 198.7 117 82.9
Peaxi162Scf00420g00940 Petunia axillaris HOM05D005263 ORTHO05D006891 7.6e-48 194.1 117 81.2
Atru.chr6.2720 Acer truncatum HOM05D005263 ORTHO05D006891 4.2e-46 188.3 124 75.8
Haze_14959 Corylus avellana HOM05D005263 ORTHO05D006891 5.5e-46 188.0 119 79.0
CsaV3_5G021940 Cucumis sativus L. HOM05D005263 ORTHO05D006891 5.5e-46 188.0 121 76.0
HPP92_009750 Vanilla planifolia HOM05D005263 ORTHO05D006891 5.5e-46 188.0 151 62.9
QL02p068621 Quercus lobata HOM05D005263 ORTHO05D006891 7.1e-46 187.6 122 77.0
HPP92_009765 Vanilla planifolia HOM05D005263 ORTHO05D006891 9.3e-46 187.2 151 62.9
arahy.Tifrunner.gnm1.ann1.J2Y82Q Arachis hypogaea HOM05D005263 ORTHO05D006891 1.6e-45 186.4 151 64.9
THA.LOC104821142 Tarenaya hassleriana HOM05D005263 ORTHO05D006891 3.0e-44 182.2 111 79.3
Lj7C619G12 Lonicera japonica HOM05D005263 ORTHO05D006891 6.7e-44 181.0 106 82.1
SGA_v2.0_scaffold122G33171 Striga asiatica HOM05D005263 ORTHO05D006891 3.3e-43 178.7 117 72.6
ClCG01G007920 Citrullus lanatus HOM05D005263 ORTHO05D006891 4.3e-43 178.3 117 74.4
SGA_v2.0_scaffold423G51442 Striga asiatica HOM05D005263 ORTHO05D006891 9.6e-43 177.2 117 70.9
Psat3g091960 Pisum sativum HOM05D005263 ORTHO05D006891 1.3e-42 176.8 117 71.8
EL10Ac6g13898 Beta vulgaris HOM05D005263 ORTHO05D006891 6.3e-42 174.5 117 72.6
AUR62017472 Chenopodium quinoa HOM05D005263 ORTHO05D006891 8.2e-42 174.1 121 70.2
Lsat_1_v5_gn_2_95241 Lactuca sativa HOM05D005263 ORTHO05D006891 1.3e-39 166.8 119 66.4
SGA_v2.0_scaffold87G27186 Striga asiatica HOM05D005263 ORTHO05D006891 8.5e-39 164.1 113 65.5
PGSC0003DMG400020233 Solanum tuberosum HOM05D005263 ORTHO05D006891 2.1e-37 159.5 99 79.8
Mapoly0015s0011 Marchantia polymorpha HOM05D005263 ORTHO05D006891 3.6e-29 132.1 150 46.7
vmacro22253 Vaccinium macrocarpon HOM05D005263 ORTHO05D006891 1.8e-25 119.8 86 74.4
SMO364G0436 Selaginella moellendorffii HOM05D005263 ORTHO05D006891 1.3e-23 113.6 130 46.9
AagrBONN_evm.TU.Sc2ySwM_117.63 Anthoceros agrestis HOM05D005263 ORTHO05D006891 8.5e-23 110.9 150 40.7
SGA_v2.0_scaffold1G00284 Striga asiatica HOM05D005263 ORTHO05D006891 4.2e-22 108.6 68 73.5
CBR_g56393 Chara braunii HOM05D000409 ORTHO05D000184 3.1e-17 92.4 133 38.3
BolC3t14640H Brassica oleracea HOM05D001005 ORTHO05D000836 1.2e-16 90.5 61 73.8
Lalb_Chr24g0402881 Lupinus albus HOM05D005263 ORTHO05D006891 6.7e-12 74.7 67 58.2
Nn4g22084 Nelumbo nucifera HOM05D005263 ORTHO05D006891 5.3e-09 65.1 36 86.1
Zm00001eb285440 Zea mays HOM05D000915 ORTHO05D001662 1.1e-06 57.4 37 62.2


User provided reference genes

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