Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu045471.1 Olea europaea HOM05D006543 ORTHO05D008308 8.8e-84 313.5 154 100.0
Oeu037566.1 Olea europaea HOM05D006543 ORTHO05D008308 1.7e-71 272.7 194 74.7
Oeu045480.1 Olea europaea HOM05D006543 ORTHO05D008308 1.0e-60 236.9 118 96.6
Glyma.04G192800 Glycine max HOM05D006543 ORTHO05D008308 1.4e-52 209.9 125 76.0
Migut.I00467 Erythranthe guttata HOM05D006543 ORTHO05D008308 5.2e-52 208.0 123 78.9
Nitab4.5_0004750g0040 Nicotiana tabacum HOM05D006543 ORTHO05D008308 8.9e-52 207.2 118 83.1
Ca_16091_v3 Cicer arietinum L. HOM05D006543 ORTHO05D008308 2.0e-51 206.1 125 74.4
Lj5A100T59 Lonicera japonica HOM05D006543 ORTHO05D008308 2.6e-51 205.7 118 78.8
MD14G1163800 Malus domestica HOM05D006543 ORTHO05D008308 3.4e-51 205.3 118 79.7
Psat5g141840 Pisum sativum HOM05D006543 ORTHO05D008308 3.4e-51 205.3 125 74.4
Cc04_g10340 Coffea canephora HOM05D006543 ORTHO05D008308 7.5e-51 204.1 118 80.5
Hma1.2p1_0046F.1_g027560 Hydrangea macrophylla HOM05D006543 ORTHO05D008308 7.5e-51 204.1 118 80.5
TPR.G24245 Trifolium pratense HOM05D006543 ORTHO05D008308 7.5e-51 204.1 125 73.6
CANSAT80G2173 Cannabis sativa HOM05D006543 ORTHO05D008308 1.3e-50 203.4 117 79.5
Lalb_Chr08g0236931 Lupinus albus HOM05D006543 ORTHO05D008308 1.3e-50 203.4 125 75.2
Aqoxy5G03584 Aquilegia oxysepala HOM05D006543 ORTHO05D008308 1.7e-50 203.0 118 78.0
arahy.Tifrunner.gnm1.ann1.8LT8QW Arachis hypogaea HOM05D006543 ORTHO05D008308 1.7e-50 203.0 125 73.6
arahy.Tifrunner.gnm1.ann1.YD5AXN Arachis hypogaea HOM05D006543 ORTHO05D008308 1.7e-50 203.0 125 73.6
Medtr3g075110 Medicago truncatula HOM05D006543 ORTHO05D008308 1.7e-50 203.0 124 73.4
Nitab4.5_0003282g0090 Nicotiana tabacum HOM05D006543 ORTHO05D008308 1.7e-50 203.0 118 80.5
CAN.G352.10 Capsicum annuum HOM05D006543 ORTHO05D008308 2.9e-50 202.2 118 80.5
Rhsim12G0172000 Rhododendron simsii HOM05D006543 ORTHO05D008308 2.9e-50 202.2 118 78.8
VMungo1309G1872 Vigna mungo HOM05D006543 ORTHO05D008308 3.7e-50 201.8 125 72.8
GSVIVG01007545001 Vitis vinifera HOM05D006543 ORTHO05D008308 3.7e-50 201.8 118 78.8
Sabra12G0067500 Salix brachista HOM05D006543 ORTHO05D008308 4.9e-50 201.4 117 79.5
vmacro16708 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 4.9e-50 201.4 118 79.7
Manes.06G115100 Manihot esculenta HOM05D006543 ORTHO05D008308 6.4e-50 201.1 117 80.3
Sopen03g030490 Solanum pennellii HOM05D006543 ORTHO05D008308 6.4e-50 201.1 118 78.8
MBI06_g38704_MAGBIO Magnolia biondii HOM05D006543 ORTHO05D008308 8.3e-50 200.7 118 78.8
Dinv11106 Davidia involucrata HOM05D006543 ORTHO05D008308 1.1e-49 200.3 118 78.8
CSS0036636 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 1.4e-49 199.9 126 73.8
QL10p005246 Quercus lobata HOM05D006543 ORTHO05D008308 1.4e-49 199.9 125 73.6
RcHm_v2.0_Chr7g0191211 Rosa chinensis HOM05D006543 ORTHO05D008308 1.4e-49 199.9 118 76.3
PGSC0003DMG400015239 Solanum tuberosum HOM05D006543 ORTHO05D008308 1.4e-49 199.9 118 78.8
Atru.chr9.1008 Acer truncatum HOM05D006543 ORTHO05D008308 1.9e-49 199.5 140 67.1
COL.COLO4_09265 Corchorus olitorius HOM05D006543 ORTHO05D008308 1.9e-49 199.5 118 77.1
Peaxi162Scf00089g00625 Petunia axillaris HOM05D006543 ORTHO05D008308 1.9e-49 199.5 118 79.7
Prupe.5G157200 Prunus persica HOM05D006543 ORTHO05D008308 1.9e-49 199.5 118 76.3
Actinidia37252 Actinidia chinensis HOM05D006543 ORTHO05D008308 2.4e-49 199.1 125 74.4
Potri.012G092900 Populus trichocarpa HOM05D006543 ORTHO05D008308 2.4e-49 199.1 117 79.5
Phvul.009G169000 Phaseolus vulgaris HOM05D006543 ORTHO05D008308 3.2e-49 198.7 125 72.0
THA.LOC104818195 Tarenaya hassleriana HOM05D006543 ORTHO05D008308 4.1e-49 198.4 135 70.4
FvH4_5g07331 Fragaria vesca HOM05D006543 ORTHO05D008308 7.0e-49 197.6 118 75.4
Solyc03g111360.3 Solanum lycopersicum HOM05D006543 ORTHO05D008308 9.2e-49 197.2 118 77.1
Thhalv10004112m.g Eutrema salsugineum HOM05D006543 ORTHO05D008308 2.0e-48 196.1 128 72.7
Gohir.A09G244900 Gossypium hirsutum HOM05D006543 ORTHO05D008308 2.0e-48 196.1 126 71.4
Gorai.006G270300 Gossypium raimondii HOM05D006543 ORTHO05D008308 2.0e-48 196.1 126 71.4
BcaNung06574 Brassica carinata HOM05D006543 ORTHO05D008308 2.7e-48 195.7 128 72.7
C09p09260 Brassica napus HOM05D006543 ORTHO05D008308 2.7e-48 195.7 128 72.7
BolC9t53839H Brassica oleracea HOM05D006543 ORTHO05D008308 2.7e-48 195.7 128 72.7
Sp2g26410 Schrenkiella parvula HOM05D006543 ORTHO05D008308 2.7e-48 195.7 128 71.9
MSTRG.11294 Avicennia marina HOM05D006543 ORTHO05D008308 3.5e-48 195.3 118 77.1
Carub.0008s2404 Capsella rubella HOM05D006543 ORTHO05D008308 4.6e-48 194.9 118 77.1
Duzib068G0092 Durio zibethinus HOM05D006543 ORTHO05D008308 4.6e-48 194.9 125 72.0
AL8G40370 Arabidopsis lyrata HOM05D006543 ORTHO05D008308 6.0e-48 194.5 128 71.9
AT5G63290 Arabidopsis thaliana HOM05D006543 ORTHO05D008308 6.0e-48 194.5 128 71.9
TAR374G1424 Trochodendron aralioides HOM05D006543 ORTHO05D008308 6.0e-48 194.5 118 72.9
A09p08200 Brassica napus HOM05D006543 ORTHO05D008308 7.8e-48 194.1 128 71.9
BraA09t36471Z Brassica rapa HOM05D006543 ORTHO05D008308 7.8e-48 194.1 128 71.9
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 7.8e-48 194.1 118 77.1
Gohir.D09G245800 Gossypium hirsutum HOM05D006543 ORTHO05D008308 1.0e-47 193.7 126 70.6
PGR044G1877 Punica granatum HOM05D006543 ORTHO05D008308 1.0e-47 193.7 117 73.5
Lj1g0002208 Lotus japonicus HOM05D006543 ORTHO05D008308 3.9e-47 191.8 125 70.4
AUR62025730 Chenopodium quinoa HOM05D006543 ORTHO05D008308 5.0e-47 191.4 126 70.6
AUR62001276 Chenopodium quinoa HOM05D006543 ORTHO05D008308 6.6e-47 191.0 126 70.6
Thecc.03G122600 Theobroma cacao HOM05D006543 ORTHO05D008308 6.6e-47 191.0 118 73.7
Ciclev10020014m.g Citrus clementina HOM05D006543 ORTHO05D008308 1.1e-46 190.3 117 75.2
FvH4_5g07462 Fragaria vesca HOM05D006543 ORTHO05D008308 1.5e-46 189.9 118 73.7
HanXRQChr05g0154751 Helianthus annuus HOM05D006543 ORTHO05D008308 2.5e-46 189.1 118 72.0
SGA_v2.0_scaffold338G49246 Striga asiatica HOM05D006543 ORTHO05D008308 2.5e-46 189.1 118 72.9
CiPaw.11G012100 Carya illinoinensis HOM05D006543 ORTHO05D008308 3.3e-46 188.7 125 70.4
ECA246G2708 Erigeron canadensis HOM05D006543 ORTHO05D008308 3.3e-46 188.7 118 72.9
Hund18538 Selenicereus undatus HOM05D006543 ORTHO05D008308 4.3e-46 188.3 118 72.9
Sed0023544 Sechium edule HOM05D006543 ORTHO05D008308 5.6e-46 188.0 117 73.5
TWI14G0972 Tripterygium wilfordii HOM05D006543 ORTHO05D008308 9.5e-46 187.2 117 72.6
vmacro16659 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 9.5e-46 187.2 110 77.3
Aa31LG1G18710 Aethionema arabicum HOM05D006543 ORTHO05D008308 1.2e-45 186.8 128 70.3
EL10Ac7g18072 Beta vulgaris HOM05D006543 ORTHO05D008308 3.6e-45 185.3 126 68.3
MELO3C026233.2 Cucumis melo HOM05D006543 ORTHO05D008308 3.6e-45 185.3 122 69.7
CsaV3_1G000810 Cucumis sativus L. HOM05D006543 ORTHO05D008308 6.2e-45 184.5 122 69.7
Sc04g0000970 Simmondsia chinensis HOM05D006543 ORTHO05D008308 6.2e-45 184.5 117 72.6
Lsat_1_v5_gn_5_13221 Lactuca sativa HOM05D006543 ORTHO05D008308 8.1e-45 184.1 117 69.2
PSO729G0022 Papaver somniferum HOM05D006543 ORTHO05D008308 1.8e-44 183.0 118 71.2
unitig_22.g5878 Utricularia gibba HOM05D006543 ORTHO05D008308 1.8e-44 183.0 118 70.3
Zm00001eb001600 Zea mays HOM05D006543 ORTHO05D008308 1.2e-43 180.3 124 66.1
Os12g0270100 Oryza sativa ssp. japonica HOM05D006543 ORTHO05D008308 1.7e-42 176.4 119 67.2
CDE04G0939 Ceratophyllum demersum HOM05D006543 ORTHO05D008308 3.2e-41 172.2 117 68.4
SEGI_06622 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 5.4e-41 171.4 134 57.5
MD06G1157200 Malus domestica HOM05D006543 ORTHO05D008308 3.5e-40 168.7 120 68.3
ClCG06G017630 Citrullus lanatus HOM05D006543 ORTHO05D008308 7.3e-38 161.0 122 63.9
Mapoly0005s0190 Marchantia polymorpha HOM05D006543 ORTHO05D008308 2.8e-37 159.1 134 54.5
ATR0733G153 Amborella trichopoda HOM05D006543 ORTHO05D008308 1.1e-36 157.1 126 58.7
SMO364G0036 Selaginella moellendorffii HOM05D006543 ORTHO05D008308 1.3e-34 150.2 126 56.3
Pp3c13_23570 Physcomitrium patens HOM05D006543 ORTHO05D008308 2.9e-34 149.1 128 51.6
BcaB04g19911 Brassica carinata HOM05D006543 ORTHO05D008308 2.4e-33 146.0 85 78.8
CARHR277150 Cardamine hirsuta HOM05D006543 ORTHO05D008308 3.2e-33 145.6 87 77.0
Lsat_1_v5_gn_4_53181 Lactuca sativa HOM05D006543 ORTHO05D008308 6.0e-32 141.4 118 57.6
Ah.15g095320 Amaranthus hybridus HOM05D006543 ORTHO05D008308 3.0e-31 139.0 126 55.6
CSS0033277 Camellia sinensis var. sinensis HOM05D006543 ORTHO05D008308 5.6e-30 134.8 112 58.9
vmacro23154 Vaccinium macrocarpon HOM05D006543 ORTHO05D008308 6.2e-29 131.3 77 80.5
CBR_g58805 Chara braunii HOM05D006543 ORTHO05D008308 3.1e-28 129.0 125 48.0
Nn3g16581 Nelumbo nucifera HOM05D006543 ORTHO05D008308 3.1e-28 129.0 78 71.8
Cre03.g171461 Chlamydomonas reinhardtii HOM05D006543 ORTHO05D008308 4.4e-27 125.2 128 47.7
PRCOL_00001606 Prasinoderma coloniale HOM05D006543 ORTHO05D008308 1.1e-25 120.6 128 43.8
AagrBONN_evm.TU.Sc2ySwM_344.2040 Anthoceros agrestis HOM05D006543 ORTHO05D008308 4.2e-25 118.6 105 46.7
Glyma.06G173133 Glycine max HOM05D006543 ORTHO05D008308 1.1e-22 110.5 64 79.7
FvH4_5g07400 Fragaria vesca HOM05D006543 ORTHO05D008308 3.3e-22 109.0 74 67.6
MCO01G029 Micromonas commoda HOM05D006543 ORTHO05D008308 1.6e-21 106.7 155 38.1
BcaB01g05367 Brassica carinata HOM05D006543 ORTHO05D008308 6.2e-21 104.8 88 64.8
Actinidia36787 Actinidia chinensis HOM05D006543 ORTHO05D008308 1.4e-20 103.6 73 63.0
SEGI_28812 Sequoiadendron giganteum HOM05D006543 ORTHO05D008308 1.5e-11 73.6 53 58.5
CAN.G352.9 Capsicum annuum HOM05D006543 ORTHO05D003127 7.6e-11 71.2 39 82.1
BcaNung00695 Brassica carinata HOM05D000342 ORTHO05D000217 2.3e-07 59.7 31 87.1
Cfa009975 Carpinus fangiana HOM05D006543 ORTHO05D008308 2.5e-06 56.2 40 62.5


User provided reference genes

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