Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042904.1 Olea europaea HOM05D003034 ORTHO05D003815 1.4e-34 149.1 76 100.0
Migut.F00702 Erythranthe guttata HOM05D003034 ORTHO05D003815 7.8e-17 90.1 82 62.2
Oeu013765.3 Olea europaea HOM05D003034 ORTHO05D003815 7.8e-17 90.1 47 89.4
Oeu011147.2 Olea europaea HOM05D003034 ORTHO05D003815 1.0e-16 89.7 47 89.4
MSTRG.27345 Avicennia marina HOM05D003034 ORTHO05D003815 1.7e-16 89.0 82 61.0
RcHm_v2.0_Chr2g0091531 Rosa chinensis HOM05D003034 ORTHO05D003815 3.9e-16 87.8 69 68.1
SalBow6G1785 Salvia bowleyana HOM05D003034 ORTHO05D003815 8.6e-16 86.7 82 59.8
SGA_v2.0_scaffold2G00918 Striga asiatica HOM05D003034 ORTHO05D003815 8.6e-16 86.7 82 58.5
Cc06_g10290 Coffea canephora HOM05D003034 ORTHO05D003815 1.1e-15 86.3 81 59.3
Nitab4.5_0000571g0140 Nicotiana tabacum HOM05D003034 ORTHO05D003815 1.1e-15 86.3 83 59.0
Nitab4.5_0001004g0210 Nicotiana tabacum HOM05D003034 ORTHO05D003815 1.1e-15 86.3 83 59.0
Nitab4.5_0001886g0070 Nicotiana tabacum HOM05D003034 ORTHO05D003815 1.1e-15 86.3 83 59.0
Atru.chr7.1439 Acer truncatum HOM05D003034 ORTHO05D003815 1.9e-15 85.5 52 76.9
Thhalv10018295m.g Eutrema salsugineum HOM05D003034 ORTHO05D003815 1.9e-15 85.5 82 57.3
unitig_748.g6993 Utricularia gibba HOM05D003034 ORTHO05D003815 1.9e-15 85.5 82 58.5
Zm00001eb193840 Zea mays HOM05D003034 ORTHO05D003815 1.9e-15 85.5 83 59.0
ATR0767G058 Amborella trichopoda HOM05D003034 ORTHO05D003815 3.3e-15 84.7 81 59.3
AL2G37350 Arabidopsis lyrata HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
BcaC08g47218 Brassica carinata HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
A07p42740 Brassica napus HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
C06p51340 Brassica napus HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
BolC6t40155H Brassica oleracea HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
BraA07t31796Z Brassica rapa HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
Nitab4.5_0001364g0040 Nicotiana tabacum HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 58.5
Sp5g32360 Schrenkiella parvula HOM05D003034 ORTHO05D003815 3.3e-15 84.7 82 57.3
Atru.chr3.2836 Acer truncatum HOM05D003034 ORTHO05D003815 4.3e-15 84.3 52 75.0
BcaNung04773 Brassica carinata HOM05D003034 ORTHO05D003815 4.3e-15 84.3 83 56.6
MD02G1060800 Malus domestica HOM05D003034 ORTHO05D003815 4.3e-15 84.3 47 83.0
MD15G1194300 Malus domestica HOM05D003034 ORTHO05D003815 4.3e-15 84.3 47 83.0
Aqoxy5G03604 Aquilegia oxysepala HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 80.9
CARHR070650 Cardamine hirsuta HOM05D003034 ORTHO05D003815 7.3e-15 83.6 82 56.1
COL.COLO4_34776 Corchorus olitorius HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Duzib150G0860 Durio zibethinus HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Duzib187G0042 Durio zibethinus HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Gohir.A06G066400 Gossypium hirsutum HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Gohir.D06G064900 Gossypium hirsutum HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Gorai.010G076000 Gossypium raimondii HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Nn6g34053 Nelumbo nucifera HOM05D003034 ORTHO05D003815 7.3e-15 83.6 82 58.5
THA.LOC104814568 Tarenaya hassleriana HOM05D003034 ORTHO05D003815 7.3e-15 83.6 82 56.1
Thecc.09G102800 Theobroma cacao HOM05D003034 ORTHO05D003815 7.3e-15 83.6 47 83.0
Actinidia32658 Actinidia chinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
CSS0003359 Camellia sinensis var. sinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
CSS0030998 Camellia sinensis var. sinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Cfa003200 Carpinus fangiana HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
CiPaw.03G226500 Carya illinoinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
CiPaw.05G159100 Carya illinoinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Ciclev10011323m.g Citrus clementina HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Haze_25807 Corylus avellana HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Dinv41659 Davidia involucrata HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
FvH4_1g05870 Fragaria vesca HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
FAN19G3151 Fragaria x ananassa HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
FAN23G2752 Fragaria x ananassa HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
FAN26G3466 Fragaria x ananassa HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
FAN28G1237 Fragaria x ananassa HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Hma1.2p1_0155F.1_g068240 Hydrangea macrophylla HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Lj7P662T23 Lonicera japonica HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Manes.03G025400 Manihot esculenta HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Manes.16G110600 Manihot esculenta HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Peaxi162Scf00463g00215 Petunia axillaris HOM05D003034 ORTHO05D003815 9.5e-15 83.2 82 58.5
QL07p045689 Quercus lobata HOM05D003034 ORTHO05D003815 9.5e-15 83.2 47 80.9
Sc18g0001400 Simmondsia chinensis HOM05D003034 ORTHO05D003815 9.5e-15 83.2 82 57.3
CAN.G1349.3 Capsicum annuum HOM05D003034 ORTHO05D003815 1.2e-14 82.8 82 57.3
Eucgr.C03783 Eucalyptus grandis HOM05D003034 ORTHO05D003815 1.2e-14 82.8 47 78.7
PSO541G1919 Papaver somniferum HOM05D003034 ORTHO05D003815 1.2e-14 82.8 83 54.2
PSO675G1466 Papaver somniferum HOM05D003034 ORTHO05D003815 1.2e-14 82.8 83 54.2
TAR383G0759 Trochodendron aralioides HOM05D003034 ORTHO05D003815 1.6e-14 82.4 47 78.7
TAR626G0953 Trochodendron aralioides HOM05D003034 ORTHO05D003815 1.6e-14 82.4 47 78.7
GSVIVG01015321001 Vitis vinifera HOM05D003034 ORTHO05D003815 1.6e-14 82.4 47 78.7
Aa31LG4G7190 Aethionema arabicum HOM05D003034 ORTHO05D003815 2.1e-14 82.0 83 55.4
Ah.13g075360 Amaranthus hybridus HOM05D003034 ORTHO05D003815 2.1e-14 82.0 82 56.1
Dinv36700 Davidia involucrata HOM05D003034 ORTHO05D003815 2.1e-14 82.0 47 78.7
FAN26G1867 Fragaria x ananassa HOM05D003034 ORTHO05D003815 2.1e-14 82.0 47 78.7
HanXRQChr12g0355101 Helianthus annuus HOM05D003034 ORTHO05D003815 2.1e-14 82.0 47 80.9
Prupe.6G190500 Prunus persica HOM05D003034 ORTHO05D003815 2.1e-14 82.0 47 78.7
HPP92_020241 Vanilla planifolia HOM05D003034 ORTHO05D003815 2.1e-14 82.0 82 57.3
HanXRQChr08g0207631 Helianthus annuus HOM05D003034 ORTHO05D003815 2.8e-14 81.6 57 70.2
Solyc12g008370.3 Solanum lycopersicum HOM05D003034 ORTHO05D003815 2.8e-14 81.6 82 56.1
Sopen12g003330 Solanum pennellii HOM05D003034 ORTHO05D003815 2.8e-14 81.6 82 56.1
PGSC0003DMG400000364 Solanum tuberosum HOM05D003034 ORTHO05D003815 2.8e-14 81.6 82 56.1
AT1G77180 Arabidopsis thaliana HOM05D003034 ORTHO05D003815 3.6e-14 81.3 84 53.6
Cpa.g.sc80.4 Carica papaya HOM05D003034 ORTHO05D003815 3.6e-14 81.3 83 56.6
Os02g0759800 Oryza sativa ssp. japonica HOM05D003034 ORTHO05D003815 3.6e-14 81.3 47 80.9
ATR0705G182 Amborella trichopoda HOM05D003034 ORTHO05D003815 4.7e-14 80.9 81 56.8
MBI01_g18395_MAGBIO Magnolia biondii HOM05D003034 ORTHO05D003815 4.7e-14 80.9 83 55.4
Peaxi162Scf00665g00023 Petunia axillaris HOM05D003034 ORTHO05D003815 4.7e-14 80.9 82 56.1
Thhalv10009601m.g Eutrema salsugineum HOM05D003034 ORTHO05D003815 6.2e-14 80.5 47 78.7
PGR102G1252 Punica granatum HOM05D003034 ORTHO05D003815 6.2e-14 80.5 83 56.6
TWI63G1404 Tripterygium wilfordii HOM05D003034 ORTHO05D003815 6.2e-14 80.5 47 76.6
A02p21160 Brassica napus HOM05D003034 ORTHO05D003815 8.1e-14 80.1 83 54.2
BraA02t07133Z Brassica rapa HOM05D003034 ORTHO05D003815 8.1e-14 80.1 83 54.2
Lsat_1_v5_gn_8_96740 Lactuca sativa HOM05D003034 ORTHO05D003815 8.1e-14 80.1 47 76.6
Lsat_1_v5_gn_8_96801 Lactuca sativa HOM05D003034 ORTHO05D003815 8.1e-14 80.1 47 76.6
CANSAT56G3645 Cannabis sativa HOM05D003034 ORTHO05D003815 1.1e-13 79.7 81 55.6
Carub.0002s2406 Capsella rubella HOM05D003034 ORTHO05D003815 1.1e-13 79.7 82 53.7
MD02G1060700 Malus domestica HOM05D003034 ORTHO05D003815 1.1e-13 79.7 91 52.7
Potri.006G163700 Populus trichocarpa HOM05D003034 ORTHO05D003815 1.1e-13 79.7 83 54.2
Sed0020635 Sechium edule HOM05D003034 ORTHO05D003815 1.1e-13 79.7 83 55.4
EL10Ac8g18404 Beta vulgaris HOM05D003034 ORTHO05D003815 1.4e-13 79.3 82 53.7
HanXRQChr06g0165831 Helianthus annuus HOM05D003034 ORTHO05D003815 1.4e-13 79.3 46 80.4
PSO017G0874 Papaver somniferum HOM05D003034 ORTHO05D003815 1.4e-13 79.3 66 60.6
Potri.018G086100 Populus trichocarpa HOM05D003034 ORTHO05D003815 1.4e-13 79.3 83 54.2
Sabra18G0074400 Salix brachista HOM05D003034 ORTHO05D003815 1.4e-13 79.3 83 54.2
CARHR019020 Cardamine hirsuta HOM05D003034 ORTHO05D003815 2.4e-13 78.6 46 78.3
CDE02G1105 Ceratophyllum demersum HOM05D003034 ORTHO05D003815 2.4e-13 78.6 83 53.0
CDE04G2309 Ceratophyllum demersum HOM05D003034 ORTHO05D003815 2.4e-13 78.6 83 53.0
Ca_11222_v3 Cicer arietinum L. HOM05D003034 ORTHO05D003815 2.4e-13 78.6 81 54.3
ECA247G1716 Erigeron canadensis HOM05D003034 ORTHO05D003815 2.4e-13 78.6 82 53.7
Lalb_Chr14g0364221 Lupinus albus HOM05D003034 ORTHO05D003815 2.4e-13 78.6 81 54.3
Lalb_Chr14g0371801 Lupinus albus HOM05D003034 ORTHO05D003815 2.4e-13 78.6 81 54.3
Psat6g027040 Pisum sativum HOM05D003034 ORTHO05D003815 2.4e-13 78.6 81 54.3
TPR.G26332 Trifolium pratense HOM05D003034 ORTHO05D003815 2.4e-13 78.6 81 54.3
arahy.Tifrunner.gnm1.ann1.H9HV5G Arachis hypogaea HOM05D003034 ORTHO05D003815 3.1e-13 78.2 81 54.3
arahy.Tifrunner.gnm1.ann1.Q11F98 Arachis hypogaea HOM05D003034 ORTHO05D003815 3.1e-13 78.2 81 54.3
arahy.Tifrunner.gnm1.ann1.SJ5F17 Arachis hypogaea HOM05D003034 ORTHO05D003815 3.1e-13 78.2 81 54.3
Carub.0001s1804 Capsella rubella HOM05D003034 ORTHO05D003815 3.1e-13 78.2 46 76.1
SHI17238 Sapria himalayana HOM05D003034 ORTHO05D003815 3.1e-13 78.2 47 74.5
ClCG11G011740 Citrullus lanatus HOM05D003034 ORTHO05D003815 4.0e-13 77.8 45 80.0
MELO3C003973.2 Cucumis melo HOM05D003034 ORTHO05D003815 4.0e-13 77.8 45 80.0
CsaV3_2G008750 Cucumis sativus L. HOM05D003034 ORTHO05D003815 4.0e-13 77.8 45 80.0
SEGI_22940 Sequoiadendron giganteum HOM05D003034 ORTHO05D003815 4.0e-13 77.8 45 77.8
MELO3C004580.2 Cucumis melo HOM05D003034 ORTHO05D003815 5.2e-13 77.4 83 53.0
DCAR_028668 Daucus carota HOM05D003034 ORTHO05D003815 6.8e-13 77.0 47 72.3
Lj3g0024359 Lotus japonicus HOM05D003034 ORTHO05D003815 6.8e-13 77.0 81 53.1
Lj3g0026495 Lotus japonicus HOM05D003034 ORTHO05D003815 6.8e-13 77.0 81 53.1
PSO333G0016 Papaver somniferum HOM05D003034 ORTHO05D003815 6.8e-13 77.0 84 51.2
PSO339G3427 Papaver somniferum HOM05D003034 ORTHO05D003815 6.8e-13 77.0 84 51.2
arahy.Tifrunner.gnm1.ann1.FQ27XI Arachis hypogaea HOM05D003034 ORTHO05D003815 8.9e-13 76.6 81 53.1
BcaB05g25024 Brassica carinata HOM05D003034 ORTHO05D003815 8.9e-13 76.6 47 74.5
Ca_00851_v3 Cicer arietinum L. HOM05D003034 ORTHO05D003815 8.9e-13 76.6 81 53.1
CsaV3_2G002010 Cucumis sativus L. HOM05D003034 ORTHO05D003815 8.9e-13 76.6 45 77.8
AUR62010919 Chenopodium quinoa HOM05D003034 ORTHO05D003815 1.2e-12 76.3 82 52.4
AUR62021432 Chenopodium quinoa HOM05D003034 ORTHO05D003815 1.2e-12 76.3 45 75.6
AUR62029022 Chenopodium quinoa HOM05D003034 ORTHO05D003815 1.2e-12 76.3 82 52.4
AUR62039009 Chenopodium quinoa HOM05D003034 ORTHO05D003815 1.2e-12 76.3 82 52.4
Prupe.7G222200 Prunus persica HOM05D003034 ORTHO05D003815 1.2e-12 76.3 47 74.5
ClCG11G002250 Citrullus lanatus HOM05D003034 ORTHO05D003815 1.5e-12 75.9 45 77.8
Medtr2g030450 Medicago truncatula HOM05D003034 ORTHO05D003815 1.5e-12 75.9 81 51.9
COL.COLO4_34758 Corchorus olitorius HOM05D003034 ORTHO05D003815 2.6e-12 75.1 86 54.7
ECA234G3735 Erigeron canadensis HOM05D003034 ORTHO05D003815 2.6e-12 75.1 84 51.2
Mapoly0133s0002 Marchantia polymorpha HOM05D003034 ORTHO05D003815 5.8e-12 73.9 46 69.6
QL12p007741 Quercus lobata HOM05D003034 ORTHO05D003815 5.8e-12 73.9 47 70.2
ECA234G3488 Erigeron canadensis HOM05D003034 ORTHO05D003815 7.6e-12 73.6 46 71.7
Thecc.04G177800 Theobroma cacao HOM05D003034 ORTHO05D003815 7.6e-12 73.6 68 58.8
MD02G1060600 Malus domestica HOM05D003034 ORTHO05D003815 9.9e-12 73.2 91 48.4
Nitab4.5_0004962g0020 Nicotiana tabacum HOM05D003034 ORTHO05D003815 9.9e-12 73.2 67 61.2
AL1G30830 Arabidopsis lyrata HOM05D003034 ORTHO05D003815 1.7e-11 72.4 47 70.2
CANSAT56G0252 Cannabis sativa HOM05D003034 ORTHO05D003815 1.7e-11 72.4 68 55.9
Ciclev10012059m.g Citrus clementina HOM05D003034 ORTHO05D003815 1.7e-11 72.4 48 72.9
VMungo0464G1299 Vigna mungo HOM05D003034 ORTHO05D003815 1.7e-11 72.4 81 49.4
Phvul.004G176500 Phaseolus vulgaris HOM05D003034 ORTHO05D003815 2.2e-11 72.0 81 49.4
PSO333G0001 Papaver somniferum HOM05D003034 ORTHO05D003815 2.9e-11 71.6 70 54.3
Carub.0006s0828 Capsella rubella HOM05D003034 ORTHO05D003815 3.8e-11 71.2 47 68.1
DCAR_019351 Daucus carota HOM05D003034 ORTHO05D003815 3.8e-11 71.2 85 50.6
Glyma.01G008600 Glycine max HOM05D003034 ORTHO05D003815 3.8e-11 71.2 81 49.4
Glyma.16G077700 Glycine max HOM05D003034 ORTHO05D003815 3.8e-11 71.2 81 49.4
BolC2t09453H Brassica oleracea HOM05D003034 ORTHO05D003815 4.9e-11 70.9 46 71.7
Ciclev10012199m.g Citrus clementina HOM05D003034 ORTHO05D003815 8.4e-11 70.1 48 70.8
Pp3c12_6510 Physcomitrium patens HOM05D003034 ORTHO05D003815 8.4e-11 70.1 83 48.2
RcHm_v2.0_Chr4g0445081 Rosa chinensis HOM05D003034 ORTHO05D003815 3.2e-10 68.2 48 64.6
FAN17G1037 Fragaria x ananassa HOM05D003034 ORTHO05D003815 1.2e-09 66.2 65 55.4
TPR.G35643 Trifolium pratense HOM05D002784 ORTHO05D003113 4.6e-09 64.3 66 48.5
AagrBONN_evm.TU.Sc2ySwM_344.799 Anthoceros agrestis HOM05D003034 ORTHO05D003815 7.8e-09 63.5 83 43.4
Sopen11g009120 Solanum pennellii HOM05D003034 ORTHO05D003815 1.0e-08 63.2 52 61.5
PGSC0003DMG400039821 Solanum tuberosum HOM05D003034 ORTHO05D003815 1.3e-08 62.8 52 59.6
CBR_g39572 Chara braunii HOM05D003034 ORTHO05D000048 2.3e-08 62.0 47 63.8
Os06g0218000 Oryza sativa ssp. japonica HOM05D003034 ORTHO05D003815 2.3e-08 62.0 46 63.0
FvH4_4g35450 Fragaria vesca HOM05D003034 ORTHO05D003815 3.9e-08 61.2 46 60.9
Nitab4.5_0005816g0030 Nicotiana tabacum HOM05D003034 ORTHO05D003815 3.9e-08 61.2 68 57.4
Actinidia03787 Actinidia chinensis HOM05D003034 ORTHO05D003815 5.1e-08 60.8 33 81.8
FAN12G0026 Fragaria x ananassa HOM05D000251 ORTHO05D000414 8.7e-08 60.1 46 60.9
Sed0026005 Sechium edule HOM05D003034 ORTHO05D003815 1.1e-07 59.7 79 46.8
Rhsim03G0075400 Rhododendron simsii HOM05D003034 ORTHO05D003815 2.5e-07 58.5 49 63.3
SMO358G0498 Selaginella moellendorffii HOM05D003034 ORTHO05D003815 2.5e-07 58.5 84 41.7
Solyc11g017220.1 Solanum lycopersicum HOM05D003034 ORTHO05D003815 2.5e-07 58.5 52 57.7
QL05p029156 Quercus lobata HOM05D003034 ORTHO05D003815 1.2e-06 56.2 76 47.4
SMO271G0070 Selaginella moellendorffii HOM05D003034 ORTHO05D003815 4.7e-06 54.3 43 60.5


User provided reference genes

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