Gene: Sopen11g009120
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g009120
- Transcript Identifier Sopen11g009120.1
- Gene Type Coding gene
- Location Spenn-ch11 : 8809444-8810721 : positive
Gene Family Information
- ID HOM05D003034
- #Genes/#Species 227/98
- Phylogenetic origin
- ID ORTHO05D003815
- #Genes/#Species 204/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen11g009120.1
Descriptions
- Description Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress. | SKIP | CONTAINS InterPro DOMAIN/s: SKI-interacting protein, SKIP , SKI-interacting protein SKIP, SNW domain ., SKI-interacting protein SKIP, SNW domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome | |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT1G77180 |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G77180 |
| GO:1901002 | ISO | PLAZA Integrative Orthology | positive regulation of response to salt stress | Os02g0759800 |
| GO:1902584 | ISO | PLAZA Integrative Orthology | positive regulation of response to water deprivation | Os02g0759800 |
| GO:0042752 | ISO | PLAZA Integrative Orthology | regulation of circadian rhythm | AT1G77180 |
| GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT1G77180 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G77180 |
| GO:0010555 | ISO | PLAZA Integrative Orthology | response to mannitol | AT1G77180 |
| GO:0010228 | ISO | PLAZA Integrative Orthology | vegetative to reproductive phase transition of meristem | AT1G77180 |
| GO:2000028 | ISO | PLAZA Integrative Orthology | regulation of photoperiodism, flowering | AT1G77180 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0036002 | ISO | PLAZA Integrative Orthology | pre-mRNA binding | AT1G77180 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G77180 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005681 | IEA | InterPro | spliceosomal complex | |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT1G77180 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G77180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.5.2.2 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component SKIP/MAC6 |