Gene: FAN12G0026

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN12G0026
  • Transcript Identifier FAN12G0026.1
  • Gene Type Coding gene
  • Location Fvb4-3 : 1015847-1030240 : negative

Gene Family Information

  • ID HOM05D000251
  • #Genes/#Species 1696/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id augustus_masked-Fvb4-3-processed-gene-10.8.v1.0.a1
  • pacid 50473618

Descriptions

  • Description PF00122//PF02731//PF12710//PF16209//PF16212 - E1-E2 ATPase (E1-E2_ATPase) // SKIP/SNW domain (SKIP_SNW) // haloacid dehalogenase-like hydrolase (HAD) // Phospholipid-translocating ATPase N-terminal (PhoLip_ATPase_N) // Phospholipid-translocating P-type ATPase C-terminal (PhoLip_ATPase_C)
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0015914
IEA
InterProphospholipid transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000166
IEA
InterPronucleotide binding
GO:0005215
IEA
InterProtransporter activity
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0000287
IEA
InterPromagnesium ion binding
GO:0140326
IEA
InterProATPase-coupled intramembrane lipid transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex
GO:0016021
IEA
InterProintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023299 P-type ATPase, cytoplasmic domain N
IPR004015 SKI-interacting protein SKIP, SNW domain
IPR044492 P-type ATPase, haloacid dehalogenase domain
IPR032630 P-type ATPase, C-terminal
IPR023214 HAD superfamily
IPR023298 P-type ATPase, transmembrane domain superfamily
IPR001757 P-type ATPase
IPR008250 P-type ATPase, A domain superfamily
IPR032631 P-type ATPase, N-terminal
IPR006539 P-type ATPase, subfamily IV
IPR036412 HAD-like superfamily
Mapman id Description
16.2.5.2.2 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.component SKIP/MAC6
24.1.2.4.1.1 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.P4-type ATPase component ALA
5.8.2.1.1.1 Lipid metabolism.lipid trafficking.endoplasmic reticulum-plastid lipid transfer.phospholipid transverse translocation.ALA-ALIS flippase complex.P4-type ATPase component ALA