Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu042815.1 Olea europaea HOM05D004569 ORTHO05D005333 4.9e-79 297.7 151 100.0
Oeu058961.1 Olea europaea HOM05D004569 ORTHO05D005333 5.8e-56 221.1 143 81.8
TAR365G0299 Trochodendron aralioides HOM05D004569 ORTHO05D005333 1.3e-39 166.8 138 61.6
SGA_v2.0_scaffold353G49718 Striga asiatica HOM05D004569 ORTHO05D005333 2.9e-39 165.6 138 60.1
SGA_v2.0_scaffold45G17132 Striga asiatica HOM05D004044 ORTHO05D005333 1.1e-38 163.7 123 61.8
Peaxi162Scf00192g01617 Petunia axillaris HOM05D004569 ORTHO05D005333 2.5e-38 162.5 152 58.6
Nn1g01867 Nelumbo nucifera HOM05D004569 ORTHO05D005333 1.6e-37 159.8 123 65.0
SalBow2G1663 Salvia bowleyana HOM05D004569 ORTHO05D005333 2.7e-37 159.1 132 60.6
Dinv07545 Davidia involucrata HOM05D004569 ORTHO05D005333 3.6e-37 158.7 136 56.6
Migut.B00535 Erythranthe guttata HOM05D004569 ORTHO05D005333 7.9e-37 157.5 132 57.6
Duzib052G0452 Durio zibethinus HOM05D004569 ORTHO05D005333 2.3e-36 156.0 140 56.4
Nitab4.5_0000321g0230 Nicotiana tabacum HOM05D004569 ORTHO05D005333 5.1e-36 154.8 150 56.7
ECA246G0155 Erigeron canadensis HOM05D004569 ORTHO05D005333 8.7e-36 154.1 128 58.6
Gohir.D02G040900 Gossypium hirsutum HOM05D004569 ORTHO05D005333 8.7e-36 154.1 146 53.4
Nitab4.5_0004412g0030 Nicotiana tabacum HOM05D004569 ORTHO05D005333 8.7e-36 154.1 147 57.1
Gohir.A02G034100 Gossypium hirsutum HOM05D004569 ORTHO05D005333 1.5e-35 153.3 146 53.4
CAN.G135.33 Capsicum annuum HOM05D004569 ORTHO05D005333 3.3e-35 152.1 121 61.2
CSS0021073 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 4.3e-35 151.8 136 56.6
Cc03_g04240 Coffea canephora HOM05D004569 ORTHO05D005333 4.3e-35 151.8 152 54.6
Hund09493 Selenicereus undatus HOM05D004569 ORTHO05D005333 4.3e-35 151.8 140 56.4
Cfa006984 Carpinus fangiana HOM05D004569 ORTHO05D005333 9.7e-35 150.6 126 60.3
GSVIVG01036653001 Vitis vinifera HOM05D004569 ORTHO05D005333 9.7e-35 150.6 118 61.9
Thecc.04G238000 Theobroma cacao HOM05D004569 ORTHO05D005333 2.8e-34 149.1 142 52.1
Duzib052G0972 Durio zibethinus HOM05D004569 ORTHO05D005333 3.7e-34 148.7 140 54.3
SalBow8G0974 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.7e-34 148.7 135 56.3
CiPaw.01G195800 Carya illinoinensis HOM05D004569 ORTHO05D005333 4.8e-34 148.3 149 52.3
HanXRQChr05g0158611 Helianthus annuus HOM05D004569 ORTHO05D005333 6.3e-34 147.9 118 60.2
Gorai.005G045300 Gossypium raimondii HOM05D004569 ORTHO05D005333 8.2e-34 147.5 142 52.1
PSO210G1425 Papaver somniferum HOM05D004569 ORTHO05D005333 1.4e-33 146.7 141 52.5
Sc19g0003960 Simmondsia chinensis HOM05D004569 ORTHO05D005333 1.4e-33 146.7 124 56.5
Aqoxy5G00407 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 1.8e-33 146.4 120 60.8
CANSAT78G0168 Cannabis sativa HOM05D004569 ORTHO05D005333 1.8e-33 146.4 142 50.0
CSS0011446 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 3.1e-33 145.6 142 54.9
Haze_03750 Corylus avellana HOM05D004569 ORTHO05D005333 4.1e-33 145.2 126 57.9
Ciclev10006087m.g Citrus clementina HOM05D004569 ORTHO05D005333 5.3e-33 144.8 143 51.0
PSO832G4509 Papaver somniferum HOM05D004569 ORTHO05D005333 5.3e-33 144.8 144 52.1
Lj6g0017152 Lotus japonicus HOM05D004569 ORTHO05D005333 1.2e-32 143.7 151 53.0
Lsat_1_v5_gn_1_12980 Lactuca sativa HOM05D004569 ORTHO05D005333 2.0e-32 142.9 128 53.1
Rhsim01G0189100 Rhododendron simsii HOM05D004569 ORTHO05D005333 2.6e-32 142.5 144 52.8
vmacro17995 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 3.4e-32 142.1 138 52.2
CSS0049273 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 4.5e-32 141.7 142 53.5
ClCG06G006470 Citrullus lanatus HOM05D004569 ORTHO05D005333 1.3e-31 140.2 129 58.1
Aa31LG11G680 Aethionema arabicum HOM05D004569 ORTHO05D005333 2.9e-31 139.0 140 50.7
Potri.005G067600 Populus trichocarpa HOM05D004569 ORTHO05D005333 2.9e-31 139.0 137 54.0
Peaxi162Scf00904g00217 Petunia axillaris HOM05D004569 ORTHO05D005333 1.1e-30 137.1 150 52.0
AUR62028629 Chenopodium quinoa HOM05D004569 ORTHO05D005333 1.4e-30 136.7 131 54.2
TWI63G1720 Tripterygium wilfordii HOM05D004569 ORTHO05D005333 2.5e-30 136.0 131 52.7
Atru.chr4.2374 Acer truncatum HOM05D004569 ORTHO05D005333 5.5e-30 134.8 131 51.9
Carub.0004s0755 Capsella rubella HOM05D004569 ORTHO05D005333 5.5e-30 134.8 135 51.9
HanXRQChr06g0173001 Helianthus annuus HOM05D004569 ORTHO05D005333 9.4e-30 134.0 135 51.1
Sed0021164 Sechium edule HOM05D004569 ORTHO05D005333 1.6e-29 133.3 145 53.1
Sopen11g003670 Solanum pennellii HOM05D004569 ORTHO05D005333 1.6e-29 133.3 158 47.5
AT5G62950 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 2.1e-29 132.9 140 51.4
unitig_748.g7305 Utricularia gibba HOM05D004569 ORTHO05D005333 2.1e-29 132.9 118 55.1
MD13G1198900 Malus domestica HOM05D004569 ORTHO05D005333 3.6e-29 132.1 142 47.2
Lalb_Chr06g0161741 Lupinus albus HOM05D004569 ORTHO05D005333 4.6e-29 131.7 129 51.9
Phvul.001G230900 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 4.6e-29 131.7 145 49.7
arahy.Tifrunner.gnm1.ann1.NDW3GA Arachis hypogaea HOM05D004569 ORTHO05D005333 6.1e-29 131.3 129 52.7
arahy.Tifrunner.gnm1.ann1.SFA2KC Arachis hypogaea HOM05D004569 ORTHO05D005333 6.1e-29 131.3 129 52.7
MBI18_g09782_MAGBIO Magnolia biondii HOM05D004569 ORTHO05D005333 6.1e-29 131.3 130 51.5
Manes.02G208200 Manihot esculenta HOM05D004569 ORTHO05D005333 6.1e-29 131.3 129 51.2
CsaV3_2G013430 Cucumis sativus L. HOM05D004569 ORTHO05D005333 1.0e-28 130.6 128 51.6
Rhsim04G0197700 Rhododendron simsii HOM05D004569 ORTHO05D005333 1.4e-28 130.2 144 51.4
VMungo1383G2501 Vigna mungo HOM05D004569 ORTHO05D005333 1.4e-28 130.2 135 49.6
CDE05G0131 Ceratophyllum demersum HOM05D004569 ORTHO05D005333 1.8e-28 129.8 125 50.4
CARHR276760 Cardamine hirsuta HOM05D004569 ORTHO05D005333 2.3e-28 129.4 146 46.6
Ah.02g110960 Amaranthus hybridus HOM05D000936 ORTHO05D001411 3.0e-28 129.0 129 49.6
Carub.0008s2366 Capsella rubella HOM05D004569 ORTHO05D005333 3.0e-28 129.0 136 49.3
AL8G39970 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 3.9e-28 128.6 136 50.7
VMungo1383G1439 Vigna mungo HOM05D004569 ORTHO05D005333 3.9e-28 128.6 151 47.7
THA.LOC104827037 Tarenaya hassleriana HOM05D004569 ORTHO05D005333 8.8e-28 127.5 151 47.0
Prupe.1G020700 Prunus persica HOM05D004569 ORTHO05D005333 1.5e-27 126.7 143 46.9
Thhalv10005100m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 3.3e-27 125.6 141 48.2
Nitab4.5_0004743g0130 Nicotiana tabacum HOM05D004569 ORTHO05D005333 3.3e-27 125.6 142 52.8
Sp2g26090 Schrenkiella parvula HOM05D004569 ORTHO05D005333 4.4e-27 125.2 138 50.0
Glyma.18G039600 Glycine max HOM05D004569 ORTHO05D005333 5.7e-27 124.8 143 49.7
AL3G51140 Arabidopsis lyrata HOM05D004569 ORTHO05D005333 7.4e-27 124.4 138 47.8
Glyma.11G217000 Glycine max HOM05D004569 ORTHO05D005333 7.4e-27 124.4 119 52.9
PGSC0003DMG400027326 Solanum tuberosum HOM05D004569 ORTHO05D005333 9.7e-27 124.0 166 43.4
Lsat_1_v5_gn_6_95400 Lactuca sativa HOM05D004569 ORTHO05D005333 1.3e-26 123.6 106 54.7
Hma1.2p1_0602F.1_g187570 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 1.7e-26 123.2 89 65.2
Lj5g0008299 Lotus japonicus HOM05D004569 ORTHO05D005333 2.2e-26 122.9 147 46.9
Dinv40544 Davidia involucrata HOM05D004569 ORTHO05D005333 3.7e-26 122.1 88 67.0
BcaB07g29675 Brassica carinata HOM05D004569 ORTHO05D005333 1.4e-25 120.2 138 47.8
MELO3C014285.2 Cucumis melo HOM05D004569 ORTHO05D005333 1.4e-25 120.2 150 45.3
Thhalv10000370m.g Eutrema salsugineum HOM05D004569 ORTHO05D005333 1.4e-25 120.2 128 50.0
Psat3g163880 Pisum sativum HOM05D004569 ORTHO05D005333 1.4e-25 120.2 142 44.4
BcaC03g18183 Brassica carinata HOM05D004569 ORTHO05D005333 2.4e-25 119.4 140 47.9
Atru.chr4.2398 Acer truncatum HOM05D004569 ORTHO05D005333 3.1e-25 119.0 91 61.5
SalBow1G3047 Salvia bowleyana HOM05D004569 ORTHO05D005333 3.1e-25 119.0 94 61.7
C02p62490 Brassica napus HOM05D004569 ORTHO05D005333 4.1e-25 118.6 139 47.5
BolC2t12308H Brassica oleracea HOM05D004569 ORTHO05D005333 4.1e-25 118.6 139 47.5
Ca_17658_v3 Cicer arietinum L. HOM05D004569 ORTHO05D005333 6.9e-25 117.9 132 47.0
Medtr7g034585 Medicago truncatula HOM05D004569 ORTHO05D005333 9.1e-25 117.5 142 43.7
BcaC01g02544 Brassica carinata HOM05D004569 ORTHO05D005333 1.2e-24 117.1 131 49.6
A02p42590 Brassica napus HOM05D004569 ORTHO05D005333 1.2e-24 117.1 135 47.4
C03p63650 Brassica napus HOM05D004569 ORTHO05D005333 1.2e-24 117.1 131 49.6
BolC3t18624H Brassica oleracea HOM05D004569 ORTHO05D005333 1.2e-24 117.1 131 49.6
BraA02t09187Z Brassica rapa HOM05D004569 ORTHO05D005333 1.2e-24 117.1 135 47.4
BcaC08g46303 Brassica carinata HOM05D004569 ORTHO05D005333 5.9e-24 114.8 130 46.9
C09p08990 Brassica napus HOM05D004569 ORTHO05D005333 1.0e-23 114.0 141 45.4
BolC6t39293H Brassica oleracea HOM05D004569 ORTHO05D005333 1.0e-23 114.0 130 46.2
BolC9t53811H Brassica oleracea HOM05D004569 ORTHO05D005333 1.0e-23 114.0 141 45.4
BcaB04g19957 Brassica carinata HOM05D004569 ORTHO05D005333 1.7e-23 113.2 137 46.0
C06p41320 Brassica napus HOM05D004569 ORTHO05D005333 1.7e-23 113.2 129 46.5
Pp3c21_14050 Physcomitrium patens HOM05D004569 ORTHO05D005333 1.7e-23 113.2 145 42.1
Sabra05G0055500 Salix brachista HOM05D004569 ORTHO05D005333 2.9e-23 112.5 89 64.0
BcaC04g23378 Brassica carinata HOM05D004569 ORTHO05D005333 3.2e-22 109.0 119 47.9
TPR.G14863 Trifolium pratense HOM05D004569 ORTHO05D005333 4.2e-22 108.6 116 50.0
PGR031G3247 Punica granatum HOM05D004569 ORTHO05D005333 5.5e-22 108.2 126 46.8
A09p07940 Brassica napus HOM05D004569 ORTHO05D005333 7.2e-22 107.8 131 46.6
PGR004G1818 Punica granatum HOM05D004569 ORTHO05D005333 9.4e-22 107.5 126 45.2
BraA09t36445Z Brassica rapa HOM05D004569 ORTHO05D005333 1.6e-21 106.7 138 42.8
Eucgr.H03416 Eucalyptus grandis HOM05D004569 ORTHO05D005333 1.6e-21 106.7 135 42.2
Aqoxy2G03457 Aquilegia oxysepala HOM05D004569 ORTHO05D005333 2.1e-21 106.3 83 63.9
Medtr6g045613 Medicago truncatula HOM05D004569 ORTHO05D005333 2.7e-21 105.9 91 54.9
BraA06t25922Z Brassica rapa HOM05D004569 ORTHO05D005333 4.7e-21 105.1 118 50.0
ATR0829G086 Amborella trichopoda HOM05D004569 ORTHO05D005333 1.4e-20 103.6 126 45.2
Zm00001eb076290 Zea mays HOM05D004569 ORTHO05D005333 2.3e-20 102.8 132 43.9
Zm00001eb310390 Zea mays HOM05D004569 ORTHO05D005333 2.3e-20 102.8 132 43.9
RcHm_v2.0_Chr4g0387641 Rosa chinensis HOM05D004569 ORTHO05D005333 3.9e-20 102.1 133 42.1
FvH4_4g01070 Fragaria vesca HOM05D004569 ORTHO05D005333 6.7e-20 101.3 147 40.1
Zm00001eb076250 Zea mays HOM05D004569 ORTHO05D005333 6.7e-20 101.3 132 43.2
Zm00001eb076270 Zea mays HOM05D004569 ORTHO05D005333 6.7e-20 101.3 132 43.2
FAN12G4296 Fragaria x ananassa HOM05D004569 ORTHO05D005333 8.8e-20 100.9 147 40.1
Psat3g162000 Pisum sativum HOM05D004569 ORTHO05D005333 8.8e-20 100.9 91 51.6
RcHm_v2.0_Chr6g0280701 Rosa chinensis HOM05D004569 ORTHO05D005333 8.8e-20 100.9 133 41.4
Mapoly0090s0037 Marchantia polymorpha HOM05D004569 ORTHO05D005333 1.1e-19 100.5 124 40.3
TAR636G3114 Trochodendron aralioides HOM05D004569 ORTHO05D005333 1.1e-19 100.5 103 53.4
Dinv07599 Davidia involucrata HOM05D004569 ORTHO05D005333 2.0e-19 99.8 75 64.0
Os12g0488800 Oryza sativa ssp. japonica HOM05D004569 ORTHO05D005333 7.4e-19 97.8 90 55.6
Atru.chr5.182 Acer truncatum HOM05D004569 ORTHO05D005333 1.3e-18 97.1 115 45.2
BcaB02g09711 Brassica carinata HOM05D004569 ORTHO05D005333 1.7e-18 96.7 120 44.2
CSS0028808 Camellia sinensis var. sinensis HOM05D004569 ORTHO05D005333 3.7e-18 95.5 142 41.5
COL.COLO4_21559 Corchorus olitorius HOM05D004569 ORTHO05D005333 4.8e-18 95.1 116 45.7
AagrBONN_evm.TU.Sc2ySwM_228.788 Anthoceros agrestis HOM05D004569 ORTHO05D005333 2.4e-17 92.8 132 37.9
FvH4_5g27570 Fragaria vesca HOM05D004569 ORTHO05D005333 3.1e-17 92.4 139 36.7
HPP92_022914 Vanilla planifolia HOM05D004569 ORTHO05D005333 1.2e-16 90.5 154 37.7
AUR62033084 Chenopodium quinoa HOM05D004569 ORTHO05D005333 5.9e-16 88.2 94 47.9
Medtr6g045603 Medicago truncatula HOM05D004569 ORTHO05D005333 7.7e-16 87.8 142 37.3
AT3G28956 Arabidopsis thaliana HOM05D004569 ORTHO05D005333 1.2e-13 80.5 62 62.9
Hma1.2p1_0549F.1_g176970 Hydrangea macrophylla HOM05D004569 ORTHO05D005333 2.1e-13 79.7 84 45.2
FAN13G2556 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.0e-12 77.4 129 34.1
SMO343G0078 Selaginella moellendorffii HOM05D004569 ORTHO05D005333 4.0e-12 75.5 164 32.9
Lj6C645G5 Lonicera japonica HOM05D004569 ORTHO05D005333 6.7e-12 74.7 142 35.2
SEGI_13490 Sequoiadendron giganteum HOM05D004569 ORTHO05D000001 6.7e-12 74.7 83 44.6
CBR_g19683 Chara braunii HOM05D004569 ORTHO05D005333 3.3e-11 72.4 91 42.9
AUR62008054 Chenopodium quinoa HOM05D000001 ORTHO05D000501 2.8e-10 69.3 77 46.8
GSVIVG01008529001 Vitis vinifera HOM05D004569 ORTHO05D005333 6.3e-10 68.2 53 62.3
Phvul.001G219600 Phaseolus vulgaris HOM05D004569 ORTHO05D005333 1.4e-09 67.0 60 53.3
FAN18G3311 Fragaria x ananassa HOM05D004569 ORTHO05D005333 1.8e-09 66.6 139 30.9
vmacro08367 Vaccinium macrocarpon HOM05D004569 ORTHO05D005333 3.1e-09 65.9 145 34.5
SEGI_07191 Sequoiadendron giganteum HOM05D004569 ORTHO05D005333 1.2e-08 63.9 71 45.1
arahy.Tifrunner.gnm1.ann1.LSLG48 Arachis hypogaea HOM05D001291 ORTHO05D005333 2.7e-08 62.8 95 37.9
SalBow2G3500 Salvia bowleyana HOM05D000011 ORTHO05D000018 2.2e-07 59.7 43 65.1


User provided reference genes

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