Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041666.1 Olea europaea HOM05D005515 ORTHO05D006620 7.9e-42 173.7 112 100.0
Cc11_g16850 Coffea canephora HOM05D005515 ORTHO05D006620 4.2e-35 151.4 113 87.6
Dinv10962 Davidia involucrata HOM05D000504 ORTHO05D006620 1.6e-34 149.4 110 87.3
CsaV3_6G032220 Cucumis sativus L. HOM05D005515 ORTHO05D006620 1.4e-33 146.4 112 81.2
Zm00001eb364510 Zea mays HOM05D005515 ORTHO05D006620 1.4e-33 146.4 111 66.7
Dinv25661 Davidia involucrata HOM05D005515 ORTHO05D006620 5.1e-33 144.4 112 73.2
Aqoxy5G03385 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 6.7e-33 144.1 112 83.0
Lsat_1_v5_gn_8_147620 Lactuca sativa HOM05D005515 ORTHO05D006620 8.8e-33 143.7 113 85.0
TAR622G0361 Trochodendron aralioides HOM05D005515 ORTHO05D006620 2.0e-32 142.5 112 85.7
Aqoxy7G00951 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 3.3e-32 141.7 111 82.9
Sed0013471 Sechium edule HOM05D005515 ORTHO05D006620 3.3e-32 141.7 111 67.6
Aqoxy2G02223 Aquilegia oxysepala HOM05D005515 ORTHO05D006620 9.7e-32 140.2 111 82.0
SEGI_35944 Sequoiadendron giganteum HOM05D005515 ORTHO05D006620 9.7e-32 140.2 112 81.2
HPP92_000347 Vanilla planifolia HOM05D005515 ORTHO05D006620 1.7e-31 139.4 111 78.4
CiPaw.04G036400 Carya illinoinensis HOM05D005515 ORTHO05D006620 2.8e-31 138.7 112 62.5
Haze_14873 Corylus avellana HOM05D005515 ORTHO05D006620 2.8e-31 138.7 112 66.1
Eucgr.I01648 Eucalyptus grandis HOM05D005515 ORTHO05D006620 2.8e-31 138.7 108 79.6
Sc07g0003980 Simmondsia chinensis HOM05D005515 ORTHO05D006620 3.7e-31 138.3 112 79.5
Gohir.A05G338800 Gossypium hirsutum HOM05D005515 ORTHO05D006620 8.2e-31 137.1 112 76.8
Gohir.D07G235400 Gossypium hirsutum HOM05D005515 ORTHO05D006620 8.2e-31 137.1 112 77.7
PSO782G3173 Papaver somniferum HOM05D005515 ORTHO05D006620 1.1e-30 136.7 112 82.1
Phvul.001G093800 Phaseolus vulgaris HOM05D005515 ORTHO05D006620 1.4e-30 136.3 113 78.8
TAR374G0204 Trochodendron aralioides HOM05D005515 ORTHO05D006620 1.4e-30 136.3 110 82.7
Atru.chr11.2315 Acer truncatum HOM05D005515 ORTHO05D006620 1.8e-30 136.0 108 85.2
Ciclev10017250m.g Citrus clementina HOM05D005515 ORTHO05D006620 1.8e-30 136.0 112 76.8
Lalb_Chr22g0360381 Lupinus albus HOM05D005515 ORTHO05D006620 1.8e-30 136.0 112 78.6
Prupe.3G305900 Prunus persica HOM05D005515 ORTHO05D006620 1.8e-30 136.0 112 77.7
GSVIVG01033096001 Vitis vinifera HOM05D005515 ORTHO05D006620 1.8e-30 136.0 112 77.7
Gorai.001G271200 Gossypium raimondii HOM05D005515 ORTHO05D006620 3.1e-30 135.2 112 77.7
Mapoly0005s0063 Marchantia polymorpha HOM05D005515 ORTHO05D006620 4.1e-30 134.8 112 76.8
arahy.Tifrunner.gnm1.ann1.W7YL8X Arachis hypogaea HOM05D005515 ORTHO05D006620 5.3e-30 134.4 114 81.6
arahy.Tifrunner.gnm1.ann1.Y4DWZG Arachis hypogaea HOM05D005515 ORTHO05D006620 5.3e-30 134.4 114 81.6
PSO063G5856 Papaver somniferum HOM05D005515 ORTHO05D006620 5.3e-30 134.4 112 81.2
CANSAT11G1216 Cannabis sativa HOM05D005515 ORTHO05D006620 6.9e-30 134.0 112 70.5
Gohir.D04G077100 Gossypium hirsutum HOM05D005515 ORTHO05D006620 6.9e-30 134.0 112 79.5
EL10Ac6g15358 Beta vulgaris HOM05D005515 ORTHO05D006620 9.1e-30 133.7 112 62.5
Gohir.A07G228200 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.5e-29 132.9 112 76.8
Pp3c12_14240 Physcomitrium patens HOM05D005515 ORTHO05D006620 1.5e-29 132.9 108 75.9
Atru.chr6.2567 Acer truncatum HOM05D005515 ORTHO05D006620 2.0e-29 132.5 111 78.4
Duzib147G1212 Durio zibethinus HOM05D005515 ORTHO05D006620 2.6e-29 132.1 112 76.8
Glyma.16G056700 Glycine max HOM05D005515 ORTHO05D006620 2.6e-29 132.1 112 76.8
MD09G1011100 Malus domestica HOM05D005515 ORTHO05D006620 2.6e-29 132.1 109 69.7
Lj1g0017105 Lotus japonicus HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 76.8
Nitab4.5_0003376g0030 Nicotiana tabacum HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 77.7
Nitab4.5_0008640g0020 Nicotiana tabacum HOM05D005515 ORTHO05D006620 3.4e-29 131.7 112 77.7
Os01g0920200 Oryza sativa ssp. japonica HOM05D005515 ORTHO05D006620 3.4e-29 131.7 110 72.7
Pp3c4_1860 Physcomitrium patens HOM05D005515 ORTHO05D006620 4.5e-29 131.3 106 79.2
FvH4_6g53480 Fragaria vesca HOM05D005515 ORTHO05D006620 5.9e-29 131.0 112 67.9
Solyc02g068110.4 Solanum lycopersicum HOM05D005515 ORTHO05D006620 5.9e-29 131.0 112 76.8
AUR62017824 Chenopodium quinoa HOM05D005515 ORTHO05D006620 7.7e-29 130.6 112 61.6
FAN09G0415 Fragaria x ananassa HOM05D005515 ORTHO05D006620 7.7e-29 130.6 111 73.0
Glyma.19G091000 Glycine max HOM05D005515 ORTHO05D006620 7.7e-29 130.6 112 75.0
Gorai.012G087000 Gossypium raimondii HOM05D005515 ORTHO05D006620 7.7e-29 130.6 109 79.8
Thecc.04G035700 Theobroma cacao HOM05D005515 ORTHO05D006620 7.7e-29 130.6 112 78.6
TWI36G0725 Tripterygium wilfordii HOM05D005515 ORTHO05D006620 7.7e-29 130.6 114 78.1
FAN05G2195 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.0e-28 130.2 111 73.0
Hund04339 Selenicereus undatus HOM05D005515 ORTHO05D006620 1.0e-28 130.2 112 75.0
Rhsim10G0006500 Rhododendron simsii HOM05D005515 ORTHO05D006620 1.3e-28 129.8 109 74.3
Potri.001G330400 Populus trichocarpa HOM05D005515 ORTHO05D006620 1.7e-28 129.4 113 69.9
Pp3c8_2660 Physcomitrium patens HOM05D005515 ORTHO05D006620 2.2e-28 129.0 110 60.0
Manes.15G160700 Manihot esculenta HOM05D005515 ORTHO05D006620 2.9e-28 128.6 112 75.0
Potri.017G069200 Populus trichocarpa HOM05D005515 ORTHO05D006620 2.9e-28 128.6 116 72.4
Zm00001eb143260 Zea mays HOM05D005515 ORTHO05D006620 2.9e-28 128.6 109 59.6
CSS0007323 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 3.8e-28 128.3 110 60.0
Peaxi162Scf00881g00228 Petunia axillaris HOM05D005515 ORTHO05D006620 5.0e-28 127.9 111 77.5
Psat3g175680 Pisum sativum HOM05D005515 ORTHO05D006620 5.0e-28 127.9 112 59.8
TPR.G38294 Trifolium pratense HOM05D005515 ORTHO05D006620 5.0e-28 127.9 112 59.8
FAN02G1022 Fragaria x ananassa HOM05D005515 ORTHO05D006620 6.5e-28 127.5 112 70.5
Duzib264G0697 Durio zibethinus HOM05D005515 ORTHO05D006620 8.5e-28 127.1 112 74.1
Medtr7g033490 Medicago truncatula HOM05D005515 ORTHO05D006620 1.9e-27 125.9 111 60.4
PGR102G1194 Punica granatum HOM05D005515 ORTHO05D006620 1.9e-27 125.9 113 77.9
Manes.12G012000 Manihot esculenta HOM05D005515 ORTHO05D006620 7.2e-27 124.0 110 80.0
Duzib187G1157 Durio zibethinus HOM05D005515 ORTHO05D006620 9.4e-27 123.6 112 75.0
CAN.G1300.5 Capsicum annuum HOM05D005515 ORTHO05D006620 1.6e-26 122.9 111 74.8
Migut.K00729 Erythranthe guttata HOM05D005515 ORTHO05D006620 2.7e-26 122.1 113 59.3
ATR1098G146 Amborella trichopoda HOM05D005515 ORTHO05D006620 3.6e-26 121.7 123 71.5
MSTRG.7999 Avicennia marina HOM05D005515 ORTHO05D006620 3.6e-26 121.7 110 77.3
Duzib268G1731 Durio zibethinus HOM05D005515 ORTHO05D006620 3.9e-25 118.2 115 58.3
Actinidia05921 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.0e-24 115.9 121 52.9
AL5G16230 Arabidopsis lyrata HOM05D005515 ORTHO05D006620 2.6e-24 115.5 114 70.2
Migut.K01462 Erythranthe guttata HOM05D005515 ORTHO05D006620 3.3e-24 115.2 110 70.0
CARHR148320 Cardamine hirsuta HOM05D005515 ORTHO05D006620 9.7e-24 113.6 115 65.2
Gohir.A05G310700 Gossypium hirsutum HOM05D005515 ORTHO05D006620 1.3e-23 113.2 96 62.5
Gorai.009G332600 Gossypium raimondii HOM05D005515 ORTHO05D006620 1.3e-23 113.2 112 57.1
unitig_8.g2909 Utricularia gibba HOM05D005515 ORTHO05D006620 1.3e-23 113.2 111 73.0
MSTRG.15568 Avicennia marina HOM05D005515 ORTHO05D006620 8.2e-23 110.5 113 70.8
Cfa009365 Carpinus fangiana HOM05D000048 ORTHO05D000445 8.2e-23 110.5 106 75.5
SMO367G0376 Selaginella moellendorffii HOM05D005515 ORTHO05D006620 7.0e-22 107.5 109 67.9
THA.LOC104823981 Tarenaya hassleriana HOM05D005515 ORTHO05D006620 9.1e-22 107.1 113 69.9
MELO3C011459.2 Cucumis melo HOM05D005515 ORTHO05D006620 5.9e-21 104.4 83 80.7
Cpa.g.sc43.50 Carica papaya HOM05D005515 ORTHO05D006620 2.9e-20 102.1 88 85.2
Nn3g16471 Nelumbo nucifera HOM05D005515 ORTHO05D006620 2.9e-20 102.1 88 81.8
Haze_12412 Corylus avellana HOM05D000048 ORTHO05D000445 5.0e-20 101.3 112 52.7
MD00G1139400 Malus domestica HOM05D005515 ORTHO05D006620 1.5e-19 99.8 82 65.9
Ciclev10033394m.g Citrus clementina HOM05D005515 ORTHO05D006620 4.2e-19 98.2 87 81.6
PGSC0003DMG401006926 Solanum tuberosum HOM05D005515 ORTHO05D006620 1.6e-18 96.3 86 77.9
Carub.0005s0534 Capsella rubella HOM05D005515 ORTHO05D006620 6.1e-18 94.4 117 64.1
FAN14G0031 Fragaria x ananassa HOM05D005515 ORTHO05D006620 1.4e-17 93.2 111 54.1
HanXRQChr12g0385431 Helianthus annuus HOM05D005515 ORTHO05D006620 5.2e-17 91.3 52 86.5
RcHm_v2.0_Chr2g0175521 Rosa chinensis HOM05D005515 ORTHO05D006620 5.2e-17 91.3 88 56.8
QL02p071462 Quercus lobata HOM05D005515 ORTHO05D006620 6.7e-17 90.9 87 56.3
AagrBONN_evm.TU.Sc2ySwM_117.47 Anthoceros agrestis HOM05D005515 ORTHO05D006620 1.2e-16 90.1 84 57.1
AT3G27100 Arabidopsis thaliana HOM05D005515 ORTHO05D006620 1.2e-16 90.1 116 62.1
Sopen02g017220 Solanum pennellii HOM05D005515 ORTHO05D006620 2.6e-16 89.0 88 52.3
Sabra16G0211700 Salix brachista HOM05D005515 ORTHO05D006620 3.3e-16 88.6 206 39.8
A09p03280 Brassica napus HOM05D005515 ORTHO05D006620 7.5e-16 87.4 116 64.7
Actinidia36201 Actinidia chinensis HOM05D005515 ORTHO05D006620 2.2e-15 85.9 84 66.7
VMungo1383G1573 Vigna mungo HOM05D005515 ORTHO05D006620 2.2e-15 85.9 51 84.3
BcaC04g23917 Brassica carinata HOM05D005515 ORTHO05D006620 2.8e-15 85.5 113 64.6
BolC9t53269H Brassica oleracea HOM05D005515 ORTHO05D006620 2.8e-15 85.5 113 64.6
vmacro05955 Vaccinium macrocarpon HOM05D005515 ORTHO05D006620 2.8e-15 85.5 86 53.5
Sabra17G0064300 Salix brachista HOM05D005515 ORTHO05D006620 3.7e-15 85.1 118 44.9
SalBow2G3427 Salvia bowleyana HOM05D005515 ORTHO05D006620 6.3e-15 84.3 85 52.9
Sp2g16230 Schrenkiella parvula HOM05D005515 ORTHO05D006620 6.3e-15 84.3 112 63.4
CSS0037273 Camellia sinensis var. sinensis HOM05D005515 ORTHO05D006620 1.4e-14 83.2 86 52.3
CDE02G3365 Ceratophyllum demersum HOM05D005515 ORTHO05D006620 1.4e-14 83.2 83 75.9
SGA_v2.0_scaffold154G37170 Striga asiatica HOM05D005515 ORTHO05D006620 2.4e-14 82.4 101 67.3
Thhalv10005161m.g Eutrema salsugineum HOM05D005515 ORTHO05D006620 1.6e-13 79.7 114 59.6
BolC7t44132H Brassica oleracea HOM05D005515 ORTHO05D006620 2.0e-13 79.3 110 50.9
Gohir.D05G311500 Gossypium hirsutum HOM05D005515 ORTHO05D006620 2.7e-13 79.0 89 51.7
Aa31LG2G5500 Aethionema arabicum HOM05D005515 ORTHO05D006620 4.5e-13 78.2 116 59.5
C09p03480 Brassica napus HOM05D005515 ORTHO05D006620 4.5e-13 78.2 88 46.6
Ah.02g120510 Amaranthus hybridus HOM05D005515 ORTHO05D006620 1.3e-12 76.6 73 53.4
BraA06t27074Z Brassica rapa HOM05D005515 ORTHO05D006620 1.3e-12 76.6 108 59.3
SalBow7G1491 Salvia bowleyana HOM05D005515 ORTHO05D006620 8.5e-12 73.9 113 46.0
A06p41490 Brassica napus HOM05D005515 ORTHO05D006620 5.5e-11 71.2 119 53.8
C07p36160 Brassica napus HOM05D005515 ORTHO05D006620 9.4e-11 70.5 106 60.4
Oeu006531.1 Olea europaea HOM05D005515 ORTHO05D006620 6.1e-10 67.8 61 57.4
Actinidia30652 Actinidia chinensis HOM05D005515 ORTHO05D006620 1.8e-09 66.2 60 58.3
MCO13G114 Micromonas commoda HOM05D005515 ORTHO05D006620 1.8e-09 66.2 87 62.1
COL.COLO4_20393 Corchorus olitorius HOM05D005515 ORTHO05D006620 6.8e-09 64.3 57 59.6
BcaB04g19426 Brassica carinata HOM05D005515 ORTHO05D006620 1.5e-08 63.2 82 59.8
Cre08.g370300 Chlamydomonas reinhardtii HOM05D005515 ORTHO05D006620 2.0e-08 62.8 108 35.2
Nn4g22340 Nelumbo nucifera HOM05D001716 ORTHO05D004234 4.4e-08 61.6 60 80.0
BraA09t35966Z Brassica rapa HOM05D005515 ORTHO05D006620 1.4e-06 56.6 87 64.4


User provided reference genes

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