Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040390.1 Olea europaea HOM05D000104 ORTHO05D005769 2.5e-116 422.2 222 100.0
Oeu033742.2 Olea europaea HOM05D000104 ORTHO05D005769 7.2e-95 350.9 215 79.1
Dinv19274 Davidia involucrata HOM05D000104 ORTHO05D005769 5.9e-65 251.5 218 60.6
MSTRG.19900 Avicennia marina HOM05D000104 ORTHO05D005769 5.0e-64 248.4 216 60.2
Actinidia22031 Actinidia chinensis HOM05D000104 ORTHO05D005769 1.2e-62 243.8 215 56.3
CSS0012736 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D005769 1.6e-62 243.4 216 56.5
Cc06_g16020 Coffea canephora HOM05D000104 ORTHO05D005769 1.6e-62 243.4 217 58.1
Lj3A921G41 Lonicera japonica HOM05D000104 ORTHO05D005769 1.5e-60 236.9 216 55.1
Lj3C919G8 Lonicera japonica HOM05D000104 ORTHO05D005769 1.5e-60 236.9 216 55.1
SalBow6G1274 Salvia bowleyana HOM05D000104 ORTHO05D005769 1.5e-60 236.9 214 63.1
Migut.J01827 Erythranthe guttata HOM05D000104 ORTHO05D005769 7.5e-60 234.6 215 56.7
CiPaw.09G030900 Carya illinoinensis HOM05D000104 ORTHO05D005769 1.2e-57 227.3 221 54.3
MBI10_g44388_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 2.7e-57 226.1 173 63.6
Ciclev10010891m.g Citrus clementina HOM05D000104 ORTHO05D005769 3.5e-57 225.7 223 55.6
vmacro07923 Vaccinium macrocarpon HOM05D000104 ORTHO05D005769 3.5e-57 225.7 217 57.1
CiPaw.10G027000 Carya illinoinensis HOM05D000104 ORTHO05D005769 4.5e-57 225.3 221 53.4
MBI10_g00717_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 5.9e-57 224.9 173 64.2
TWI14G1199 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 1.3e-56 223.8 216 54.6
QL07p023509 Quercus lobata HOM05D000104 ORTHO05D005769 1.7e-56 223.4 218 54.1
Rhsim03G0007000 Rhododendron simsii HOM05D000104 ORTHO05D005769 1.7e-56 223.4 217 53.9
TWI23G0183 Tripterygium wilfordii HOM05D000104 ORTHO05D005769 6.6e-56 221.5 219 54.3
CANSAT64G2572 Cannabis sativa HOM05D000104 ORTHO05D005769 1.9e-55 219.9 221 51.1
Sopen03g015780 Solanum pennellii HOM05D000104 ORTHO05D005769 2.5e-55 219.5 217 54.4
DCAR_006645 Daucus carota HOM05D000104 ORTHO05D005769 4.3e-55 218.8 218 54.1
Sc11g0006160 Simmondsia chinensis HOM05D000104 ORTHO05D005769 4.3e-55 218.8 173 58.4
Atru.chr8.1090 Acer truncatum HOM05D000104 ORTHO05D005769 5.6e-55 218.4 218 61.0
TAR381G0643 Trochodendron aralioides HOM05D000104 ORTHO05D005769 9.5e-55 217.6 220 53.6
Solyc03g063210.3 Solanum lycopersicum HOM05D000104 ORTHO05D005769 1.6e-54 216.9 217 53.0
Haze_19977 Corylus avellana HOM05D000104 ORTHO05D005769 2.1e-54 216.5 221 51.1
FAN21G3997 Fragaria x ananassa HOM05D000104 ORTHO05D005769 2.1e-54 216.5 220 50.0
FAN25G3235 Fragaria x ananassa HOM05D000104 ORTHO05D005769 2.1e-54 216.5 220 50.0
Nitab4.5_0003890g0010 Nicotiana tabacum HOM05D000104 ORTHO05D005769 4.7e-54 215.3 210 54.8
Prupe.4G135700 Prunus persica HOM05D000104 ORTHO05D005769 6.1e-54 214.9 220 52.7
Sabra01G0160500 Salix brachista HOM05D000104 ORTHO05D005769 6.1e-54 214.9 175 60.0
Potri.001G207700 Populus trichocarpa HOM05D000104 ORTHO05D005769 1.8e-53 213.4 212 52.8
Potri.003G022100 Populus trichocarpa HOM05D000104 ORTHO05D005769 1.8e-53 213.4 174 59.8
FvH4_3g15170 Fragaria vesca HOM05D000104 ORTHO05D005769 2.3e-53 213.0 145 66.2
FAN16G1962 Fragaria x ananassa HOM05D000104 ORTHO05D005769 2.3e-53 213.0 145 66.2
CAN.G570.8 Capsicum annuum HOM05D000104 ORTHO05D005769 4.0e-53 212.2 212 51.9
MBI16_g14599_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D005769 4.0e-53 212.2 171 60.8
MD10G1206600 Malus domestica HOM05D000104 ORTHO05D005769 5.2e-53 211.8 220 50.0
FAN11G3896 Fragaria x ananassa HOM05D000104 ORTHO05D005769 6.8e-53 211.5 145 65.5
GSVIVG01033511001 Vitis vinifera HOM05D000104 ORTHO05D005769 8.9e-53 211.1 219 52.1
Sabra03G0014100 Salix brachista HOM05D000104 ORTHO05D005769 1.2e-52 210.7 174 58.6
Actinidia40431 Actinidia chinensis HOM05D000104 ORTHO05D005769 2.0e-52 209.9 135 67.4
RcHm_v2.0_Chr5g0025621 Rosa chinensis HOM05D000104 ORTHO05D005769 3.4e-52 209.1 220 49.5
Nitab4.5_0000324g0210 Nicotiana tabacum HOM05D000104 ORTHO05D005769 4.4e-52 208.8 223 51.6
Duzib177G0813 Durio zibethinus HOM05D000104 ORTHO05D005769 3.7e-51 205.7 222 51.4
Nn5g28295 Nelumbo nucifera HOM05D000104 ORTHO05D005769 3.7e-51 205.7 219 52.5
Thecc.05G185200 Theobroma cacao HOM05D000104 ORTHO05D005769 4.9e-51 205.3 221 49.8
Peaxi162Scf00258g00432 Petunia axillaris HOM05D000104 ORTHO05D005769 8.3e-51 204.5 216 53.2
Cpa.g.sc34.20 Carica papaya HOM05D000104 ORTHO05D005769 1.4e-50 203.8 222 57.7
AUR62018509 Chenopodium quinoa HOM05D000104 ORTHO05D005769 4.1e-50 202.2 136 63.2
Aqoxy4G02068 Aquilegia oxysepala HOM05D000104 ORTHO05D005769 7.0e-50 201.4 160 55.6
MELO3C009633.2 Cucumis melo HOM05D000104 ORTHO05D005769 9.2e-50 201.1 172 55.8
CsaV3_3G038900 Cucumis sativus L. HOM05D000104 ORTHO05D005769 9.2e-50 201.1 173 55.5
Manes.15G110200 Manihot esculenta HOM05D000104 ORTHO05D005769 9.2e-50 201.1 160 59.4
Psat4g106680 Pisum sativum HOM05D000104 ORTHO05D005769 9.2e-50 201.1 212 52.8
Gohir.A08G227300 Gossypium hirsutum HOM05D000104 ORTHO05D005769 1.6e-49 200.3 213 50.7
Lalb_Chr21g0316431 Lupinus albus HOM05D000104 ORTHO05D005769 1.6e-49 200.3 212 50.5
SGA_v2.0_scaffold69G23071 Striga asiatica HOM05D000104 ORTHO05D005769 1.6e-49 200.3 206 56.8
Gohir.D08G247700 Gossypium hirsutum HOM05D000104 ORTHO05D005769 2.7e-49 199.5 215 50.2
Gorai.004G264200 Gossypium raimondii HOM05D000104 ORTHO05D005769 2.7e-49 199.5 215 50.2
Ca_25705_v3 Cicer arietinum L. HOM05D000104 ORTHO05D005769 3.5e-49 199.1 212 51.9
Glyma.09G112200 Glycine max HOM05D000104 ORTHO05D005769 7.8e-49 198.0 212 50.0
TPR.G27751 Trifolium pratense HOM05D000104 ORTHO05D005769 1.7e-48 196.8 213 51.2
Phvul.007G259200 Phaseolus vulgaris HOM05D000104 ORTHO05D005769 5.0e-48 195.3 215 49.8
Medtr1g053955 Medicago truncatula HOM05D000104 ORTHO05D005769 8.6e-48 194.5 213 50.7
Hund17598 Selenicereus undatus HOM05D000104 ORTHO05D005769 8.6e-48 194.5 225 52.9
VMungo0720G3110 Vigna mungo HOM05D000104 ORTHO05D005769 8.6e-48 194.5 212 51.9
EL10Ac3g07414 Beta vulgaris HOM05D000104 ORTHO05D005769 1.1e-47 194.1 135 63.0
Glyma.02G174100 Glycine max HOM05D000104 ORTHO05D005769 1.5e-47 193.7 140 63.6
SGA_v2.0_scaffold105G30483 Striga asiatica HOM05D000104 ORTHO05D005769 2.5e-47 193.0 172 55.2
Sed0011551 Sechium edule HOM05D000104 ORTHO05D005769 3.3e-47 192.6 173 53.2
ClCG10G017460 Citrullus lanatus HOM05D000104 ORTHO05D005769 5.6e-47 191.8 174 54.0
Sp3g10970 Schrenkiella parvula HOM05D000104 ORTHO05D005769 2.1e-46 189.9 221 49.8
Thhalv10019875m.g Eutrema salsugineum HOM05D000104 ORTHO05D005769 2.8e-46 189.5 177 55.4
CARHR087340 Cardamine hirsuta HOM05D000104 ORTHO05D005769 6.2e-46 188.3 136 64.7
ECA248G0087 Erigeron canadensis HOM05D000104 ORTHO05D005769 1.4e-45 187.2 178 55.6
Lsat_1_v5_gn_1_55460 Lactuca sativa HOM05D000104 ORTHO05D005769 2.3e-45 186.4 156 58.3
Aa31LG8G90 Aethionema arabicum HOM05D000104 ORTHO05D005769 3.1e-45 186.0 136 65.4
THA.LOC104826283 Tarenaya hassleriana HOM05D000104 ORTHO05D005769 3.1e-45 186.0 136 63.2
HPP92_024595 Vanilla planifolia HOM05D000104 ORTHO05D005769 3.1e-45 186.0 229 44.5
AL3G24490 Arabidopsis lyrata HOM05D000104 ORTHO05D005769 1.2e-44 184.1 233 47.2
AT3G12810 Arabidopsis thaliana HOM05D000104 ORTHO05D005769 2.6e-44 183.0 233 46.8
HanXRQChr11g0348031 Helianthus annuus HOM05D000104 ORTHO05D005769 2.6e-44 183.0 180 53.9
Ah.13g077720 Amaranthus hybridus HOM05D000104 ORTHO05D005769 3.4e-44 182.6 136 58.8
PSO528G0284 Papaver somniferum HOM05D000104 ORTHO05D005769 4.4e-44 182.2 136 58.8
Lj5g0023468 Lotus japonicus HOM05D000104 ORTHO05D005769 5.8e-44 181.8 217 46.5
Carub.0003s1218 Capsella rubella HOM05D000104 ORTHO05D005769 1.3e-43 180.6 232 45.7
A05p36660 Brassica napus HOM05D000104 ORTHO05D005769 1.7e-43 180.3 136 62.5
BraA05t22469Z Brassica rapa HOM05D000104 ORTHO05D005769 1.7e-43 180.3 136 62.5
BcaC05g29235 Brassica carinata HOM05D000104 ORTHO05D005769 6.4e-43 178.3 136 61.8
C05p55090 Brassica napus HOM05D000104 ORTHO05D005769 6.4e-43 178.3 136 61.8
BolC5t34177H Brassica oleracea HOM05D000104 ORTHO05D005769 6.4e-43 178.3 136 61.8
HanXRQChr01g0026921 Helianthus annuus HOM05D000104 ORTHO05D005769 6.4e-43 178.3 181 54.7
BcaB06g25509 Brassica carinata HOM05D000104 ORTHO05D005769 8.3e-43 177.9 229 47.2
PSO170G6710 Papaver somniferum HOM05D000104 ORTHO05D005769 5.4e-42 175.3 137 56.9
CDE05G2237 Ceratophyllum demersum HOM05D000104 ORTHO05D005769 6.0e-41 171.8 175 50.3
unitig_26.g9068 Utricularia gibba HOM05D000104 ORTHO05D005769 6.0e-41 171.8 219 47.9
SHI16563 Sapria himalayana HOM05D000104 ORTHO05D005769 1.0e-40 171.0 135 59.3
ATR1152G044 Amborella trichopoda HOM05D000104 ORTHO05D005769 9.5e-39 164.5 178 51.7
Eucgr.K01834 Eucalyptus grandis HOM05D000104 ORTHO05D005769 9.5e-39 164.5 127 61.4
PGR142G4395 Punica granatum HOM05D000104 ORTHO05D005769 1.8e-37 160.2 171 48.0
Os02g0689800 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D005769 2.2e-35 153.3 171 46.8
Zm00001eb251100 Zea mays HOM05D000104 ORTHO05D005769 4.9e-35 152.1 174 45.4
Zm00001eb187690 Zea mays HOM05D000104 ORTHO05D005769 1.1e-34 151.0 173 45.7
COL.COLO4_22907 Corchorus olitorius HOM05D000104 ORTHO05D005769 5.6e-31 138.7 83 71.1
Pp3c10_13800 Physcomitrium patens HOM05D000104 ORTHO05D005769 1.5e-23 114.0 137 43.1
Pp3c3_30220 Physcomitrium patens HOM05D000104 ORTHO05D005769 4.7e-22 109.0 128 44.5
Mapoly0111s0052 Marchantia polymorpha HOM05D000104 ORTHO05D005769 6.2e-22 108.6 134 44.0
AagrBONN_evm.TU.Sc2ySwM_340.21 Anthoceros agrestis HOM05D000104 ORTHO05D005769 5.8e-20 102.1 125 40.8
CBR_g19274 Chara braunii HOM05D000104 ORTHO05D005769 1.9e-15 87.0 163 33.7
Psat3g174280 Pisum sativum HOM05D001700 ORTHO05D005769 1.1e-07 61.2 34 73.5
Pp3c7_10800 Physcomitrium patens HOM05D002628 ORTHO05D002785 1.5e-07 60.8 77 33.8
CBR_g6670 Chara braunii HOM05D000019 ORTHO05D000002 5.6e-07 58.9 100 32.0
Mapoly0075s0051 Marchantia polymorpha HOM05D002628 ORTHO05D002785 6.2e-06 55.5 56 39.3


User provided reference genes

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