Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038979.1 Olea europaea HOM05D003901 ORTHO05D004511 7.0e-70 267.7 195 100.0
Oeu058252.1 Olea europaea HOM05D003901 ORTHO05D004511 3.0e-52 209.1 189 74.1
Dinv29460 Davidia involucrata HOM05D003901 ORTHO05D004511 2.1e-34 149.8 112 69.6
Peaxi162Scf00086g02615 Petunia axillaris HOM05D003901 ORTHO05D004511 1.8e-33 146.7 133 57.9
Potri.004G184900 Populus trichocarpa HOM05D003901 ORTHO05D004511 6.9e-33 144.8 111 65.8
Actinidia24200 Actinidia chinensis HOM05D003901 ORTHO05D004511 2.0e-32 143.3 114 66.7
SalBow6G4040 Salvia bowleyana HOM05D003901 ORTHO05D004511 2.0e-32 143.3 115 62.6
CiPaw.14G101900 Carya illinoinensis HOM05D003901 ORTHO05D004511 7.6e-32 141.4 108 66.7
Lalb_Chr19g0136621 Lupinus albus HOM05D003901 ORTHO05D004511 9.9e-32 141.0 126 58.7
Glyma.12G183500 Glycine max HOM05D003901 ORTHO05D004511 1.3e-31 140.6 112 65.2
TWI31G1346 Tripterygium wilfordii HOM05D003901 ORTHO05D004511 1.7e-31 140.2 110 64.5
Glyma.13G317500 Glycine max HOM05D003901 ORTHO05D004511 3.8e-31 139.0 112 65.2
Ca_19879_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 4.9e-31 138.7 112 64.3
PGSC0003DMG400007404 Solanum tuberosum HOM05D003901 ORTHO05D004511 4.9e-31 138.7 129 55.8
VMungo1080G0029 Vigna mungo HOM05D003901 ORTHO05D004511 4.9e-31 138.7 89 75.3
Cfa010046 Carpinus fangiana HOM05D003901 ORTHO05D004511 6.4e-31 138.3 109 65.1
Lj2C981T10 Lonicera japonica HOM05D003901 ORTHO05D004511 6.4e-31 138.3 120 60.0
Nn1g08411 Nelumbo nucifera HOM05D003901 ORTHO05D004511 6.4e-31 138.3 122 60.7
Phvul.005G125300 Phaseolus vulgaris HOM05D003901 ORTHO05D004511 6.4e-31 138.3 114 64.0
Solyc11g067200.2 Solanum lycopersicum HOM05D003901 ORTHO05D004511 6.4e-31 138.3 129 56.6
Sopen11g026900 Solanum pennellii HOM05D003901 ORTHO05D004511 6.4e-31 138.3 129 56.6
TAR623G0259 Trochodendron aralioides HOM05D003901 ORTHO05D004511 6.4e-31 138.3 110 64.5
MSTRG.18747 Avicennia marina HOM05D003901 ORTHO05D004511 8.4e-31 137.9 195 46.7
Psat5g256560 Pisum sativum HOM05D003901 ORTHO05D004511 8.4e-31 137.9 112 63.4
DCAR_012182 Daucus carota HOM05D003901 ORTHO05D004511 1.1e-30 137.5 121 59.5
Nitab4.5_0002837g0010 Nicotiana tabacum HOM05D003901 ORTHO05D004511 1.1e-30 137.5 134 53.7
RcHm_v2.0_Chr1g0317731 Rosa chinensis HOM05D003901 ORTHO05D004511 1.1e-30 137.5 128 58.6
CSS0013179 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 1.9e-30 136.7 116 63.8
CANSAT54G2221 Cannabis sativa HOM05D003901 ORTHO05D004511 3.2e-30 136.0 117 59.8
Duzib150G1114 Durio zibethinus HOM05D003901 ORTHO05D004511 3.2e-30 136.0 105 69.5
Ciclev10027719m.g Citrus clementina HOM05D003901 ORTHO05D004511 4.2e-30 135.6 106 66.0
Manes.04G005300 Manihot esculenta HOM05D003901 ORTHO05D004511 4.2e-30 135.6 104 65.4
Prupe.8G049600 Prunus persica HOM05D003901 ORTHO05D004511 4.2e-30 135.6 105 65.7
PGR102G2249 Punica granatum HOM05D003901 ORTHO05D004511 4.2e-30 135.6 92 72.8
Sabra04G0124700 Salix brachista HOM05D003901 ORTHO05D004511 4.2e-30 135.6 108 64.8
TPR.G23813 Trifolium pratense HOM05D003901 ORTHO05D004511 4.2e-30 135.6 115 60.0
Actinidia07234 Actinidia chinensis HOM05D003901 ORTHO05D004511 9.3e-30 134.4 121 59.5
CSS0003254 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 9.3e-30 134.4 107 64.5
CSS0026986 Camellia sinensis var. sinensis HOM05D003901 ORTHO05D004511 9.3e-30 134.4 89 75.3
Medtr2g086140 Medicago truncatula HOM05D003901 ORTHO05D004511 9.3e-30 134.4 112 62.5
Gorai.009G086800 Gossypium raimondii HOM05D003901 ORTHO05D004511 1.2e-29 134.0 106 67.9
SGA_v2.0_scaffold22G09887 Striga asiatica HOM05D003901 ORTHO05D004511 1.2e-29 134.0 109 66.1
Sabra09G0115000 Salix brachista HOM05D003901 ORTHO05D004511 1.6e-29 133.7 112 59.8
arahy.Tifrunner.gnm1.ann1.3X8FVR Arachis hypogaea HOM05D003901 ORTHO05D004511 2.1e-29 133.3 112 60.7
CAN.G942.7 Capsicum annuum HOM05D003901 ORTHO05D004511 2.1e-29 133.3 114 61.4
Sabra09G0112300 Salix brachista HOM05D003901 ORTHO05D004511 2.1e-29 133.3 108 62.0
Eucgr.B03876 Eucalyptus grandis HOM05D003901 ORTHO05D004511 2.7e-29 132.9 109 62.4
Nitab4.5_0000234g0130 Nicotiana tabacum HOM05D003901 ORTHO05D004511 3.5e-29 132.5 132 52.3
Sc12g0004380 Simmondsia chinensis HOM05D003901 ORTHO05D004511 3.5e-29 132.5 109 65.1
THA.LOC104810914 Tarenaya hassleriana HOM05D003901 ORTHO05D004511 3.5e-29 132.5 107 65.4
GSVIVG01036170001 Vitis vinifera HOM05D003901 ORTHO05D004511 3.5e-29 132.5 104 65.4
Haze_23407 Corylus avellana HOM05D003901 ORTHO05D004511 4.6e-29 132.1 115 61.7
FvH4_7g01610 Fragaria vesca HOM05D003901 ORTHO05D004511 4.6e-29 132.1 106 64.2
MD00G1078300 Malus domestica HOM05D003901 ORTHO05D004511 4.6e-29 132.1 106 63.2
RcHm_v2.0_Chr5g0044121 Rosa chinensis HOM05D003901 ORTHO05D004511 1.0e-28 131.0 113 58.4
Migut.D02350 Erythranthe guttata HOM05D003901 ORTHO05D004511 1.7e-28 130.2 120 59.2
vmacro03304 Vaccinium macrocarpon HOM05D003901 ORTHO05D004511 1.7e-28 130.2 106 64.2
Atru.chr3.3302 Acer truncatum HOM05D003901 ORTHO05D004511 3.0e-28 129.4 115 59.1
Lalb_Chr03g0028001 Lupinus albus HOM05D003901 ORTHO05D004511 3.0e-28 129.4 110 59.1
COL.COLO4_19917 Corchorus olitorius HOM05D003901 ORTHO05D004511 3.9e-28 129.0 124 57.3
QL01p012653 Quercus lobata HOM05D003901 ORTHO05D004511 3.9e-28 129.0 87 71.3
FAN03G3037 Fragaria x ananassa HOM05D003901 ORTHO05D004511 5.1e-28 128.6 108 60.2
FAN16G3118 Fragaria x ananassa HOM05D003901 ORTHO05D004511 5.1e-28 128.6 113 57.5
Lalb_Chr01g0004811 Lupinus albus HOM05D003901 ORTHO05D004511 5.1e-28 128.6 129 52.7
Os09g0567700 Oryza sativa ssp. japonica HOM05D003901 ORTHO05D004511 5.1e-28 128.6 94 67.0
Potri.009G144800 Populus trichocarpa HOM05D003901 ORTHO05D004511 5.1e-28 128.6 101 64.4
Hund20872 Selenicereus undatus HOM05D003901 ORTHO05D004511 5.1e-28 128.6 114 58.8
ClCG02G022110 Citrullus lanatus HOM05D003901 ORTHO05D004511 6.6e-28 128.3 120 57.5
FAN21G1062 Fragaria x ananassa HOM05D003901 ORTHO05D004511 8.7e-28 127.9 113 57.5
Psat5g093200 Pisum sativum HOM05D003901 ORTHO05D004511 8.7e-28 127.9 120 58.3
SGA_v2.0_scaffold147G36366 Striga asiatica HOM05D003901 ORTHO05D004511 8.7e-28 127.9 111 63.1
Ca_19387_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 1.1e-27 127.5 91 70.3
Ca_19390_v3 Cicer arietinum L. HOM05D003901 ORTHO05D004511 1.1e-27 127.5 91 70.3
Medtr4g053675 Medicago truncatula HOM05D003901 ORTHO05D004511 1.1e-27 127.5 91 71.4
FAN25G0520 Fragaria x ananassa HOM05D003901 ORTHO05D004511 1.5e-27 127.1 113 56.6
MELO3C021430.2 Cucumis melo HOM05D003901 ORTHO05D004511 2.5e-27 126.3 119 57.1
Duzib170G0819 Durio zibethinus HOM05D003901 ORTHO05D004511 2.5e-27 126.3 106 64.2
TWI79G1394 Tripterygium wilfordii HOM05D003901 ORTHO05D004511 2.5e-27 126.3 109 56.9
BcaC01g02054 Brassica carinata HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.0
A06p21860 Brassica napus HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.0
C03p69110 Brassica napus HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.0
BolC3t19166H Brassica oleracea HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.0
BraA06t25277Z Brassica rapa HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.0
Thhalv10010089m.g Eutrema salsugineum HOM05D003901 ORTHO05D004511 3.3e-27 125.9 119 58.8
Lj3g0014833 Lotus japonicus HOM05D003901 ORTHO05D004511 3.3e-27 125.9 89 67.4
FvH4_3g24580 Fragaria vesca HOM05D003901 ORTHO05D004511 4.3e-27 125.6 113 55.8
Sed0027491 Sechium edule HOM05D003901 ORTHO05D004511 4.3e-27 125.6 120 55.8
Thecc.09G286400 Theobroma cacao HOM05D003901 ORTHO05D004511 4.3e-27 125.6 89 69.7
BcaB02g10752 Brassica carinata HOM05D003901 ORTHO05D004511 5.6e-27 125.2 119 58.0
CsaV3_6G014950 Cucumis sativus L. HOM05D003901 ORTHO05D004511 5.6e-27 125.2 119 57.1
HanXRQChr13g0397211 Helianthus annuus HOM05D003901 ORTHO05D004511 5.6e-27 125.2 86 69.8
ATR0820G249 Amborella trichopoda HOM05D003901 ORTHO05D004511 7.3e-27 124.8 79 73.4
Rhsim13G0109800 Rhododendron simsii HOM05D003901 ORTHO05D004511 7.3e-27 124.8 107 59.8
Duzib168G1973 Durio zibethinus HOM05D003901 ORTHO05D004511 9.6e-27 124.4 106 64.2
FAN11G2495 Fragaria x ananassa HOM05D003901 ORTHO05D004511 9.6e-27 124.4 113 55.8
ECA233G5986 Erigeron canadensis HOM05D003901 ORTHO05D004511 1.3e-26 124.0 119 57.1
CDE08G0670 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 1.6e-26 123.6 81 70.4
AUR62039227 Chenopodium quinoa HOM05D003901 ORTHO05D004511 1.6e-26 123.6 104 63.5
Gohir.A08G004600 Gossypium hirsutum HOM05D003901 ORTHO05D004511 2.8e-26 122.9 106 63.2
Carub.0005s1017 Capsella rubella HOM05D003901 ORTHO05D004511 3.6e-26 122.5 122 57.4
AL5G22600 Arabidopsis lyrata HOM05D003901 ORTHO05D004511 4.8e-26 122.1 119 58.0
Aqoxy2G01263 Aquilegia oxysepala HOM05D003901 ORTHO05D004511 6.2e-26 121.7 97 63.9
CDE06G1793 Ceratophyllum demersum HOM05D003901 ORTHO05D004511 6.2e-26 121.7 81 69.1
TPR.G17239 Trifolium pratense HOM05D003901 ORTHO05D004511 6.2e-26 121.7 106 64.2
Ah.08g215860 Amaranthus hybridus HOM05D003901 ORTHO05D004511 1.1e-25 120.9 111 60.4
Aqoxy4G02822 Aquilegia oxysepala HOM05D003901 ORTHO05D004511 1.1e-25 120.9 89 68.5
Gorai.004G009300 Gossypium raimondii HOM05D003901 ORTHO05D004511 1.1e-25 120.9 106 62.3
Gohir.D08G014900 Gossypium hirsutum HOM05D003901 ORTHO05D004511 1.4e-25 120.6 106 62.3
AT3G44530 Arabidopsis thaliana HOM05D003901 ORTHO05D004511 2.4e-25 119.8 119 56.3
BcaB01g01161 Brassica carinata HOM05D003901 ORTHO05D004511 2.4e-25 119.8 119 55.5
CARHR104350 Cardamine hirsuta HOM05D003901 ORTHO05D004511 4.0e-25 119.0 79 73.4
EL10Ac7g15802 Beta vulgaris HOM05D003901 ORTHO05D004511 5.3e-25 118.6 113 54.0
Aa31LG4G13900 Aethionema arabicum HOM05D003901 ORTHO05D004511 9.0e-25 117.9 109 56.9
SHI06109 Sapria himalayana HOM05D003901 ORTHO05D004511 1.2e-24 117.5 88 63.6
PSO339G1552 Papaver somniferum HOM05D003901 ORTHO05D004511 2.0e-24 116.7 87 65.5
PSO384G0212 Papaver somniferum HOM05D003901 ORTHO05D004511 2.0e-24 116.7 87 65.5
AUR62009782 Chenopodium quinoa HOM05D003901 ORTHO05D004511 2.6e-24 116.3 108 59.3
Zm00001eb121570 Zea mays HOM05D003901 ORTHO05D004511 3.4e-24 115.9 80 72.5
HPP92_006803 Vanilla planifolia HOM05D003901 ORTHO05D004511 9.9e-24 114.4 79 70.9
Lsat_1_v5_gn_6_40560 Lactuca sativa HOM05D003901 ORTHO05D004511 1.3e-23 114.0 81 69.1
Actinidia37329 Actinidia chinensis HOM05D003901 ORTHO05D004511 1.7e-23 113.6 107 58.9
AUR62044072 Chenopodium quinoa HOM05D003901 ORTHO05D004511 4.2e-22 109.0 75 74.7
Sabra09G0112400 Salix brachista HOM05D000477 ORTHO05D000338 4.2e-22 109.0 108 54.6
Ah.15g095680 Amaranthus hybridus HOM05D003901 ORTHO05D004511 7.1e-22 108.2 91 60.4
Lj1C241G3 Lonicera japonica HOM05D003901 ORTHO05D004511 3.0e-20 102.8 108 57.4
Prupe.8G049500 Prunus persica HOM05D003901 ORTHO05D004511 7.4e-19 98.2 83 61.4
SMO139G0105 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 1.8e-17 93.6 84 54.8
SMO165G0087 Selaginella moellendorffii HOM05D003901 ORTHO05D004511 1.8e-17 93.6 84 54.8
Mapoly0043s0108 Marchantia polymorpha HOM05D003901 ORTHO05D004511 5.5e-14 82.0 81 50.6
Pp3c16_16320 Physcomitrium patens HOM05D003901 ORTHO05D004511 1.3e-12 77.4 81 46.9
CBR_g60059 Chara braunii HOM05D003901 ORTHO05D004511 2.3e-12 76.6 79 49.4
FAN25G0964 Fragaria x ananassa HOM05D003901 ORTHO05D004511 2.3e-12 76.6 74 52.7
AagrBONN_evm.TU.Sc2ySwM_228.5081 Anthoceros agrestis HOM05D003901 ORTHO05D004511 3.9e-12 75.9 82 46.3
Cpa.g.sc32.110 Carica papaya HOM05D000796 ORTHO05D004511 1.1e-11 74.3 85 51.8
Cpa.g.c36505.3 Carica papaya HOM05D003901 ORTHO05D004511 1.5e-11 73.9 43 76.7
Pp3c27_1720 Physcomitrium patens HOM05D003901 ORTHO05D004511 7.4e-11 71.6 86 45.3
Manes.11G160250 Manihot esculenta HOM05D003901 ORTHO05D004511 1.6e-10 70.5 52 67.3
Cc01_g09440 Coffea canephora HOM05D003901 ORTHO05D004511 1.5e-08 63.9 42 73.8
Cc03_g06690 Coffea canephora HOM05D003901 ORTHO05D004511 1.5e-08 63.9 42 73.8
Sp5g16690 Schrenkiella parvula HOM05D003901 ORTHO05D004511 4.9e-07 58.9 77 46.8


User provided reference genes

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