Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu036611.1 Olea europaea HOM05D005418 ORTHO05D006724 1.3e-54 216.1 108 100.0
Migut.D01215 Erythranthe guttata HOM05D005418 ORTHO05D006724 1.4e-40 169.5 89 91.0
SGA_v2.0_scaffold40G15645 Striga asiatica HOM05D005418 ORTHO05D006724 1.2e-39 166.4 89 91.0
SalBow1G6390 Salvia bowleyana HOM05D005418 ORTHO05D006724 2.1e-39 165.6 92 88.0
Cc04_g09290 Coffea canephora HOM05D005418 ORTHO05D006724 7.9e-39 163.7 89 88.8
MSTRG.9356 Avicennia marina HOM05D005418 ORTHO05D006724 1.0e-38 163.3 89 87.6
Cfa005619 Carpinus fangiana HOM05D005418 ORTHO05D006724 5.1e-38 161.0 92 83.7
vmacro17855 Vaccinium macrocarpon HOM05D005418 ORTHO05D006724 8.7e-38 160.2 89 85.4
Ca_25975_v3 Cicer arietinum L. HOM05D005418 ORTHO05D006724 1.9e-37 159.1 89 84.3
Solyc03g097990.3 Solanum lycopersicum HOM05D005418 ORTHO05D006724 2.5e-37 158.7 89 85.4
Sopen03g028700 Solanum pennellii HOM05D005418 ORTHO05D006724 2.5e-37 158.7 89 85.4
PGSC0003DMG400033680 Solanum tuberosum HOM05D005418 ORTHO05D006724 2.5e-37 158.7 89 85.4
Nitab4.5_0000430g0100 Nicotiana tabacum HOM05D005418 ORTHO05D006724 3.3e-37 158.3 89 84.3
Nitab4.5_0006110g0060 Nicotiana tabacum HOM05D005418 ORTHO05D006724 3.3e-37 158.3 89 84.3
TPR.G14843 Trifolium pratense HOM05D005418 ORTHO05D006724 3.3e-37 158.3 89 84.3
CSS0002924 Camellia sinensis var. sinensis HOM05D005418 ORTHO05D006724 5.7e-37 157.5 97 80.4
AUR62036432 Chenopodium quinoa HOM05D005418 ORTHO05D006724 9.7e-37 156.8 95 78.9
CAN.G637.36 Capsicum annuum HOM05D005418 ORTHO05D006724 1.3e-36 156.4 89 84.3
CiPaw.15G148000 Carya illinoinensis HOM05D005418 ORTHO05D006724 1.3e-36 156.4 92 81.5
COL.COLO4_07665 Corchorus olitorius HOM05D005418 ORTHO05D006724 1.3e-36 156.4 89 80.9
Aqoxy5G00519 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 1.6e-36 156.0 89 82.0
Aqoxy6G02988 Aquilegia oxysepala HOM05D005418 ORTHO05D006724 1.6e-36 156.0 89 82.0
Cpa.g.sc64.48 Carica papaya HOM05D005418 ORTHO05D006724 1.6e-36 156.0 89 84.3
FvH4_5g17750 Fragaria vesca HOM05D005418 ORTHO05D006724 1.6e-36 156.0 91 84.6
RcHm_v2.0_Chr7g0177871 Rosa chinensis HOM05D005418 ORTHO05D006724 1.6e-36 156.0 89 84.3
Lj2g0014184 Lotus japonicus HOM05D005418 ORTHO05D006724 2.2e-36 155.6 92 80.4
PSO210G6190 Papaver somniferum HOM05D005418 ORTHO05D006724 2.2e-36 155.6 89 82.0
Hund01906 Selenicereus undatus HOM05D005418 ORTHO05D006724 2.8e-36 155.2 92 78.3
GSVIVG01037420001 Vitis vinifera HOM05D005418 ORTHO05D006724 2.8e-36 155.2 89 84.3
FAN08G1767 Fragaria x ananassa HOM05D005418 ORTHO05D006724 3.7e-36 154.8 89 84.3
MD14G1240000 Malus domestica HOM05D005418 ORTHO05D006724 3.7e-36 154.8 92 80.4
Medtr0332s0040 Medicago truncatula HOM05D005418 ORTHO05D006724 3.7e-36 154.8 89 82.0
Peaxi162Scf00171g00918 Petunia axillaris HOM05D005418 ORTHO05D006724 3.7e-36 154.8 89 84.3
unitig_899.g14817 Utricularia gibba HOM05D005418 ORTHO05D006724 3.7e-36 154.8 89 85.4
Phvul.004G147300 Phaseolus vulgaris HOM05D005418 ORTHO05D006724 4.8e-36 154.5 92 79.3
FAN18G2901 Fragaria x ananassa HOM05D005418 ORTHO05D006724 6.3e-36 154.1 89 84.3
Nn1g06291 Nelumbo nucifera HOM05D005418 ORTHO05D006724 6.3e-36 154.1 89 80.9
arahy.Tifrunner.gnm1.ann1.20VKS9 Arachis hypogaea HOM05D005418 ORTHO05D006724 8.2e-36 153.7 89 82.0
AUR62017076 Chenopodium quinoa HOM05D005418 ORTHO05D006724 8.2e-36 153.7 89 83.1
Thecc.10G098100 Theobroma cacao HOM05D005418 ORTHO05D006724 8.2e-36 153.7 92 79.3
Lalb_Chr22g0353611 Lupinus albus HOM05D005418 ORTHO05D006724 1.1e-35 153.3 92 80.4
Psat1g028800 Pisum sativum HOM05D005418 ORTHO05D006724 1.1e-35 153.3 89 80.9
Actinidia09063 Actinidia chinensis HOM05D005418 ORTHO05D006724 1.8e-35 152.5 89 82.0
FAN13G2408 Fragaria x ananassa HOM05D005418 ORTHO05D006724 1.8e-35 152.5 89 83.1
QL10p031782 Quercus lobata HOM05D005418 ORTHO05D006724 1.8e-35 152.5 92 80.4
Manes.06G002300 Manihot esculenta HOM05D005418 ORTHO05D006724 2.4e-35 152.1 92 81.5
Potri.015G036600 Populus trichocarpa HOM05D005418 ORTHO05D006724 2.4e-35 152.1 89 79.8
Duzib128G1895 Durio zibethinus HOM05D005418 ORTHO05D006724 3.1e-35 151.8 92 77.2
TAR365G0064 Trochodendron aralioides HOM05D005418 ORTHO05D006724 3.1e-35 151.8 92 78.3
DCAR_011383 Daucus carota HOM05D000073 ORTHO05D000033 4.1e-35 151.4 89 79.8
Glyma.07G106200 Glycine max HOM05D005418 ORTHO05D006724 4.1e-35 151.4 92 77.2
Gohir.A05G289300 Gossypium hirsutum HOM05D005418 ORTHO05D006724 6.9e-35 150.6 89 78.7
Gohir.D05G290700 Gossypium hirsutum HOM05D005418 ORTHO05D006724 6.9e-35 150.6 89 78.7
Gorai.009G305700 Gossypium raimondii HOM05D005418 ORTHO05D006724 6.9e-35 150.6 89 78.7
HanXRQChr14g0431131 Helianthus annuus HOM05D005418 ORTHO05D006724 6.9e-35 150.6 89 82.0
ATR0827G099 Amborella trichopoda HOM05D005418 ORTHO05D006724 9.0e-35 150.2 92 77.2
COL.COLO4_34153 Corchorus olitorius HOM05D005418 ORTHO05D006724 1.2e-34 149.8 89 77.5
Prupe.5G237600 Prunus persica HOM05D005418 ORTHO05D006724 1.2e-34 149.8 92 78.3
VMungo0464G1360 Vigna mungo HOM05D005418 ORTHO05D006724 1.2e-34 149.8 89 79.8
arahy.Tifrunner.gnm1.ann1.XQM4JL Arachis hypogaea HOM05D005418 ORTHO05D006724 1.5e-34 149.4 87 81.6
Manes.14G173200 Manihot esculenta HOM05D005418 ORTHO05D006724 2.0e-34 149.1 92 78.3
TWI60G0409 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 2.0e-34 149.1 92 78.3
EL10Ac4g07599 Beta vulgaris HOM05D005418 ORTHO05D006724 3.4e-34 148.3 89 77.5
Atru.chr9.1604 Acer truncatum HOM05D005418 ORTHO05D006724 4.5e-34 147.9 89 78.7
BcaC08g45620 Brassica carinata HOM05D005418 ORTHO05D006724 4.5e-34 147.9 89 78.7
A07p29640 Brassica napus HOM05D005418 ORTHO05D006724 4.5e-34 147.9 89 78.7
BraA07t30605Z Brassica rapa HOM05D005418 ORTHO05D006724 4.5e-34 147.9 89 78.7
Lsat_1_v5_gn_2_11960 Lactuca sativa HOM05D005418 ORTHO05D006724 4.5e-34 147.9 89 78.7
AL2G33630 Arabidopsis lyrata HOM05D005418 ORTHO05D006724 5.9e-34 147.5 89 77.5
Carub.0002s2057 Capsella rubella HOM05D005418 ORTHO05D006724 5.9e-34 147.5 89 77.5
CARHR066900 Cardamine hirsuta HOM05D005418 ORTHO05D006724 5.9e-34 147.5 89 77.5
Thhalv10019100m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 5.9e-34 147.5 89 77.5
ClCG04G012830 Citrullus lanatus HOM05D005418 ORTHO05D006724 7.6e-34 147.1 89 76.4
MELO3C001923.2 Cucumis melo HOM05D005418 ORTHO05D006724 7.6e-34 147.1 89 76.4
Sp5g29010 Schrenkiella parvula HOM05D005418 ORTHO05D006724 7.6e-34 147.1 89 76.4
MBI17_g10951_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 1.0e-33 146.7 92 76.1
SEGI_01195 Sequoiadendron giganteum HOM05D005418 ORTHO05D006724 1.0e-33 146.7 89 77.5
BcaB03g15730 Brassica carinata HOM05D005418 ORTHO05D006724 1.3e-33 146.4 89 77.5
BolC6t38495H Brassica oleracea HOM05D005418 ORTHO05D006724 1.3e-33 146.4 89 77.5
CsaV3_1G004910 Cucumis sativus L. HOM05D005418 ORTHO05D006724 1.3e-33 146.4 89 75.3
ECA238G0283 Erigeron canadensis HOM05D005418 ORTHO05D006724 1.3e-33 146.4 89 77.5
HPP92_016144 Vanilla planifolia HOM05D005418 ORTHO05D006724 1.3e-33 146.4 89 76.4
AT1G73820 Arabidopsis thaliana HOM05D005418 ORTHO05D006724 1.7e-33 146.0 89 76.4
TWI15G1138 Tripterygium wilfordii HOM05D005418 ORTHO05D006724 1.7e-33 146.0 92 75.0
HPP92_026203 Vanilla planifolia HOM05D005418 ORTHO05D006724 1.7e-33 146.0 88 77.3
THA.LOC104812146 Tarenaya hassleriana HOM05D005418 ORTHO05D006724 2.9e-33 145.2 89 76.4
Aa31LG4G11570 Aethionema arabicum HOM05D005418 ORTHO05D006724 5.0e-33 144.4 89 77.5
C06p33820 Brassica napus HOM05D005418 ORTHO05D006724 6.5e-33 144.1 89 76.4
Lj9C416T2 Lonicera japonica HOM05D005418 ORTHO05D006724 6.5e-33 144.1 89 79.8
CANSAT78G1374 Cannabis sativa HOM05D005418 ORTHO05D006724 8.5e-33 143.7 89 75.3
Dinv09076 Davidia involucrata HOM05D005418 ORTHO05D006724 8.5e-33 143.7 81 85.2
SHI12596 Sapria himalayana HOM05D005418 ORTHO05D006724 4.2e-32 141.4 89 76.4
PGR102G0744 Punica granatum HOM05D005418 ORTHO05D006724 5.5e-32 141.0 89 75.3
Ciclev10005966m.g Citrus clementina HOM05D005418 ORTHO05D006724 9.3e-32 140.2 92 72.8
Sed0019275 Sechium edule HOM05D005418 ORTHO05D006724 1.2e-31 139.8 89 71.9
CDE12G0113 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 1.6e-31 139.4 92 73.9
Actinidia06835 Actinidia chinensis HOM05D005418 ORTHO05D006724 2.7e-31 138.7 120 61.7
Thhalv10019803m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 4.6e-31 137.9 89 74.2
Sc12g0008750 Simmondsia chinensis HOM05D005418 ORTHO05D006724 6.1e-31 137.5 81 75.3
SMO232G0125 Selaginella moellendorffii HOM05D005418 ORTHO05D006724 1.0e-30 136.7 89 70.8
Pp3c23_19050 Physcomitrium patens HOM05D005418 ORTHO05D006724 1.8e-30 136.0 92 69.6
CBR_g52356 Chara braunii HOM05D005418 ORTHO05D006724 2.3e-30 135.6 96 69.8
Sabra15G0030200 Salix brachista HOM05D005418 ORTHO05D006724 3.0e-30 135.2 130 56.2
Thhalv10019340m.g Eutrema salsugineum HOM05D005418 ORTHO05D006724 3.9e-30 134.8 81 77.8
Pp3c8_14260 Physcomitrium patens HOM05D005418 ORTHO05D006724 5.1e-30 134.4 89 69.7
Zm00001eb139180 Zea mays HOM05D005418 ORTHO05D006724 8.8e-30 133.7 89 65.2
Os12g0168200 Oryza sativa ssp. japonica HOM05D005418 ORTHO05D006724 1.9e-29 132.5 89 62.9
AagrBONN_evm.TU.Sc2ySwM_344.1040 Anthoceros agrestis HOM05D005418 ORTHO05D006724 4.3e-29 131.3 93 66.7
Mapoly0058s0033 Marchantia polymorpha HOM05D005418 ORTHO05D006724 2.2e-28 129.0 92 67.4
MD06G1233000 Malus domestica HOM05D005418 ORTHO05D006724 2.4e-27 125.6 108 60.2
Hma1.2p1_0471F.1_g159370 Hydrangea macrophylla HOM05D005418 ORTHO05D006724 1.9e-24 115.9 178 41.0
PSO832G3604 Papaver somniferum HOM05D005418 ORTHO05D006724 2.5e-24 115.5 89 65.2
Rhsim08G0113500 Rhododendron simsii HOM05D005418 ORTHO05D006724 6.1e-23 110.9 175 42.3
Sabra15G0031100 Salix brachista HOM05D005418 ORTHO05D006724 5.1e-22 107.8 192 37.0
Cre02.g145300 Chlamydomonas reinhardtii HOM05D005418 ORTHO05D006724 2.8e-20 102.1 87 56.3
MCO08G311 Micromonas commoda HOM05D005418 ORTHO05D006724 1.9e-16 89.4 89 52.8
PGSC0003DMG400019995 Solanum tuberosum HOM05D005418 ORTHO05D006724 1.9e-16 89.4 51 80.4
Haze_15514 Corylus avellana HOM05D005418 ORTHO05D006724 3.2e-16 88.6 48 87.5
CDE11G0106 Ceratophyllum demersum HOM05D005418 ORTHO05D006724 2.1e-15 85.9 48 81.2
Pp3c24_6390 Physcomitrium patens HOM05D005418 ORTHO05D006724 6.1e-15 84.3 49 75.5
MBI17_g45323_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 1.4e-14 83.2 48 79.2
Cfa023691 Carpinus fangiana HOM05D005418 ORTHO05D006724 5.2e-14 81.3 107 39.3
PRCOL_00006990 Prasinoderma coloniale HOM05D005418 ORTHO05D006724 7.4e-13 77.4 89 44.9
Sabra15G0030300 Salix brachista HOM05D005418 ORTHO05D012650 1.7e-12 76.3 71 56.3
Eucgr.J01305 Eucalyptus grandis HOM05D005418 ORTHO05D006724 2.5e-08 62.4 44 65.9
Eucgr.J01328 Eucalyptus grandis HOM05D005418 ORTHO05D006724 1.6e-07 59.7 57 50.9
Eucgr.J01334 Eucalyptus grandis HOM05D005418 ORTHO05D006724 1.6e-07 59.7 57 50.9
MBI17_g40296_MAGBIO Magnolia biondii HOM05D005418 ORTHO05D006724 5.2e-06 54.7 31 80.6
COL.COLO4_34165 Corchorus olitorius HOM05D005418 ORTHO05D006724 6.7e-06 54.3 43 62.8
COL.COLO4_07708 Corchorus olitorius HOM05D005418 ORTHO05D006724 8.8e-06 53.9 82 39.0


User provided reference genes

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